Collated Gene Ontology terms

Biological process: RNA binding(2014, 2015)

Molecular function: chromatin organization2014, 2019, 2024 response to red light2008, 2024 response to blue light2008, 2024 regulation of photomorphogenesis2008, 2024 regulation of circadian rhythm2008, 2024 miRNA processing2017, 2024 ethylene-activated signaling pathway2011, 2024 regulation of RNA splicing2021, 2024 mRNA processing2024 RNA splicing2024
rhythmic process2024 spermatogenesis2008 regulation of mRNA splicing, via spliceosome2022 mRNA cis splicing, via spliceosome2020 embryonic cranial skeleton morphogenesis2022 central nervous system development2022

Cellular component: nucleus2006, 2008, 2009, 2015, 2021, 2024 nucleoplasm2015, 2022, 2023, 2024 midbody2023, 2024 intercellular bridge2023, 2024 endoplasmic reticulum2017, 2024 chromatin2015, 2024 membrane2024 endoplasmic reticulum membrane2024

Phylogenetic distribution

Chordates: 21/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 0/1 
Porifera: 0/0 
Choanoflagellates+: 11/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 4/4 
Hacrobia: 0/0 
Plants: 36/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
A0A061E0B7_THECC
EnsemblPlants»
0.0
TCM_006691 Xap5 circadian timekeeper isoform 1 Theobroma cacao
TI:3641 None
 
A0A067E465_CITSI
Ensembl»
0.0
CISIN_1g0193851mg XAP5 protein Citrus sinensis
TI:2711 None
 
A0A067E4K9_CITSI
Ensembl»
0.0
CISIN_1g0193852mg Uncharacterized protein Citrus sinensis
TI:2711 None
 
A0A078FNA0_BRANA
EnsemblPlants»
0.0
BnaA09g43400D (rape) hypothetical
protein (BnaA09g43400D protein)		 Brassica napus
TI:3708 None
 
A0A078FU58_BRANA
EnsemblPlants»
0.0
BnaA04g11980D BnaA04g11980D protein Brassica napus
TI:3708 None
 
A0A0A0LM87_CUCSA
EnsemblPlants»
0.0
Csa_2G263920 Protein XAP5 CIRCADIAN TIMEKEEPER Cucumis sativus
TI:3659 None
 
A0A0K9P157_ZOSMR
EnsemblPlants»
0.0
ZOSMA_44G01040 Xap5,circadian timekeeper Zostera marina
TI:29655 None
 
A0A159YK42_CHLRE
EnsemblPlants»
0.0
XAP5 X-chromosome-associated protein 5 Chlamydomonas reinhardtii
TI:3055 None
 
A0A1S3XX52_TOBAC
EnsemblFungi»
0.0
LOC107769723 Protein XAP5 CIRCADIAN TIMEKEEPER Nicotiana tabacum
TI:4097 None
   
A0A1U8B7C5_NELNU
EnsemblBacteria»
0.0
LOC104607814 Protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 Nelumbo nucifera
TI:4432 None
   
A0A1U8JRM0_GOSHI
Ensembl»
0.0
LOC107908671 Protein XAP5 CIRCADIAN
TIMEKEEPER-like isoform X1		 Gossypium hirsutum
TI:3635 None
   
A0A1U8LIK8_GOSHI
Ensembl»
0.0
LOC107927818 Protein XAP5 CIRCADIAN TIMEKEEPER Gossypium hirsutum
TI:3635 None
   
A0A1W0W5Y3_SORBI
EnsemblPlants»
0.0
SORBI_3002G277600 Protein XAP5 CIRCADIAN TIMEKEEPER Sorghum bicolor
TI:4558 None
 
A0A1Y1HYC5_KLENI
EnsemblPlants»
0.0
KFL_000640250 XAP5 family protein Klebsormidium nitens
TI:105231 None
 
A0A251S9W4_HELAN
EnsemblPlants»
0.0
XCT Putative XAP5 family protein (XAP5 protein) Helianthus annuus
TI:4232 None
 
A0A2C9V192_MANES
EnsemblPlants»
0.0
MANES_11G090000 Protein XAP5 CIRCADIAN TIMEKEEPER Manihot esculenta
TI:3983 None
 
A0A2C9W0J2_MANES
EnsemblPlants»
0.0
MANES_04G078200 Protein XAP5 CIRCADIAN TIMEKEEPER Manihot esculenta
TI:3983 None
 
A0A2G2Y2K1_CAPAN
EnsemblPlants»
0.0
T459_32097 Protein XAP5 CIRCADIAN TIMEKEEPER Capsicum annuum
TI:4072 None
 
A0A2I4EWY5_JUGRE
EnsemblPlants»
0.0
LOC108993434 Protein XAP5 CIRCADIAN TIMEKEEPER-like Juglans regia
TI:51240 None
   
A0A2I4GC24_JUGRE
EnsemblPlants»
0.0
LOC109006571 Protein XAP5 CIRCADIAN TIMEKEEPER-like Juglans regia
TI:51240 None
 
A0A2K1L152_PHYPA
EnsemblPlants»
0.0
PHYPA_002548 Protein XAP5 CIRCADIAN TIMEKEEPER Physcomitrium patens
TI:3218 None
 
A0A2R6XGH2_MARPO
EnsemblPlants»
0.0
MARPO_0015s0022 Protein XAP5 CIRCADIAN TIMEKEEPER Marchantia polymorpha
TI:3197 None
 
A0A3Q2HLB3_HORSE
Ensembl»
0.0
FAM50A Family with sequence similarity 50 member A Equus caballus
TI:9796 None
   
A0A3Q7ETZ9_SOLLC
EnsemblPlants»
0.0
Translocon-associated protein subunit alpha
(Signal sequence receptor subunit alpha)		 Solanum lycopersicum
TI:4081 None
   
A0A5F5XMX9_FELCA
Ensembl»
0.0
FAM50B Family with sequence similarity 50 member B Felis catus
TI:9685 None
 
A0A5F8H994_MONDO
Ensembl»
0.0
FAM50B Protein FAM50A Monodelphis domestica
TI:13616 None
   
A0A5G2QKU3_PIG
Ensembl»
0.0
FAM50A Family with sequence similarity 50 member A Sus scrofa
TI:9823 None
   
A0A5K1UVZ5_MACMU
Ensembl»
0.0
FAM50A Family with sequence similarity 50 member A Macaca mulatta
TI:9544 None
   
A0A7I4B823_PHYPA
EnsemblPlants»
0.0
Protein XAP5 CIRCADIAN TIMEKEEPER Physcomitrium patens
TI:3218 None
 
A0A7M7PVE9_STRPU
EnsemblMetazoa»
0.0
Protein FAM50A Strongylocentrotus purpuratus
TI:7668 None
   
A0A804IU74_MUSAM
EnsemblPlants»
0.0
GSMUA_132650.1 (wild Malaysian banana) hypothetical protein Musa acuminata
TI:4641 None
 
A0A8I3PZL2_CANLF
Ensembl»
0.0
FAM50A Family with sequence similarity 50 member A Canis lupus
TI:9612 None
   
A0A8I5ZZR9_RAT
RGD»
0.0
ENSRNOG00000071146 Protein FAM50A Rattus norvegicus
TI:10116 None
   
A0A8R1ZCB0_PRIPA
EnsemblMetazoa»
0.0
WBGene00305017 Protein FAM50 homolog Pristionchus pacificus
TI:54126 None
   
A0A9J7L6X5_BRAFL
CTD»
0.0
LOC118416468 Protein FAM50A-like Branchiostoma floridae
TI:7739 None
   
A0A9J7MSF1_BRAFL
CTD»
0.0
LOC118416901 Protein FAM50 homolog Branchiostoma floridae
TI:7739 None
   
A0BZV5_PARTE
EnsemblProtists»
0.0
GSPATT00005924001 Chromosome undetermined scaffold_14,
whole genome shotgun sequence		 Paramecium tetraurelia
TI:5888 None
 
A0D9X7_PARTE
EnsemblProtists»
0.0
GSPATT00014776001 Chromosome undetermined scaffold_42,
whole genome shotgun sequence		 Paramecium tetraurelia
TI:5888 None
 
A0DWQ0_PARTE
EnsemblProtists»
0.0
GSPATT00021110001 Chromosome undetermined scaffold_67,
whole genome shotgun sequence		 Paramecium tetraurelia
TI:5888 None
 
A0E3H5_PARTE
EnsemblProtists»
0.0
GSPATT00023015001 Chromosome undetermined scaffold_76,
whole genome shotgun sequence		 Paramecium tetraurelia
TI:5888 None
 
A7F8X0_SCLS1
EnsemblFungi»
0.0
SS1G_14051 XAP5 protein Sclerotinia sclerotiorum
TI:5180 None
 
A9V9G2_MONBE
EnsemblProtists»
0.0
MONBRDRAFT_28793 Protein FAM50 homolog Monosiga brevicollis
TI:81824 None
 
B3S3V0_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_28870 Protein FAM50 homolog Trichoplax adhaerens
TI:10228 None
 
B6K6G2_SCHJY
EnsemblFungi»
0.0
SJAG_04293 Xap-5-like protein Schizosaccharomyces japonicus
TI:4897 None
 
B7QFH7_IXOSC
EnsemblMetazoa»
0.0
IscW_ISCW012217 Protein FAM50 homolog Ixodes scapularis
TI:6945 None
 
B7ZYJ9_MAIZE
EnsemblPlants»
0.0
100279523 Protein XAP5 CIRCADIAN TIMEKEEPER Zea mays
TI:4577 None
 
B8C484_THAPS
EnsemblProtists»
0.0
THAPSDRAFT_23226 XAP5-domain-containing protein Thalassiosira pseudonana
TI:35128 None
 
B9H152_POPTR
EnsemblPlants»
0.0
POPTR_004G168400 XAP5 family protein Populus trichocarpa
TI:3694 None
 
B9HRA8_POPTR
EnsemblPlants»
0.0
POPTR_009G129700 XAP5 family protein Populus trichocarpa
TI:3694 None
 
B9STC7_RICCO
EnsemblBacteria»
0.0
RCOM_0660610 Protein FAM50A, putative Ricinus communis
TI:3988 None
 
D3Z9C2_RAT
RGD»
0.5
Fam50b Family with sequence similarity 50, member B Rattus norvegicus
TI:10116 None
   
D6WTJ7_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_08623 Protein FAM50 homolog Tribolium castaneum
TI:7070 None
 
D7U5A2_VITVI
EnsemblPlants»
0.0
VIT_03s0038g01810 Protein XAP5 CIRCADIAN TIMEKEEPER Vitis vinifera
TI:29760 None
 
D8REB9_SELML
EnsemblPlants»
0.0
SELMODRAFT_170698 Protein XAP5 CIRCADIAN TIMEKEEPER Selaginella moellendorffii
TI:88036 None
 
D8RHV8_SELML
EnsemblPlants»
0.0
SELMODRAFT_94249 Protein XAP5 CIRCADIAN TIMEKEEPER Selaginella moellendorffii
TI:88036 None
 
D8SL86_SELML
EnsemblPlants»
0.0
SELMODRAFT_120045 Uncharacterized protein Selaginella moellendorffii
TI:88036 None
 
D8STP0_SELML
EnsemblPlants»
0.0
SELMODRAFT_124535 Uncharacterized protein Selaginella moellendorffii
TI:88036 None
 
E1BDX9_BOVIN
Ensembl»
0.0
FAM50A Family with sequence similarity 50 member A Bos taurus
TI:9913 None
   
E3L293_PUCGT
EnsemblFungi»
0.0
PGTG_16694 XAP-5-like protein Puccinia graminis
TI:5297 None
 
E9GK72_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_51776 Protein FAM50 homolog Daphnia pulex
TI:6669 None
 
E9HH81_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_62813 Protein FAM50 homolog Daphnia pulex
TI:6669 None
 
F0ZS53_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_37066 Protein FAM50 homolog Dictyostelium purpureum
TI:5786 None
 
F2D6Q5_HORVV
EnsemblPlants»
0.0
Predicted protein Hordeum vulgare
TI:4513 None
 
F4P0I9_BATDJ
EnsemblBacteria»
0.0
BATDEDRAFT_24147 XAP5-domain-containing protein Batrachochytrium dendrobatidis
TI:109871 None
 
F50AA_XENLA
AG»
0.0
fam50a-a Protein FAM50A-A Xenopus laevis
TI:8355 None
 
F50AB_XENLA
AG»
0.0
fam50a-b Protein FAM50A-B Xenopus laevis
TI:8355 None
 
F6VCG5_CIOIN
Ensembl»
0.0
Protein FAM50 homolog Ciona intestinalis
TI:7719 None
 
F7AUE4_ORNAN
Ensembl»
0.0
FAM50B Family with sequence similarity 50 member A Ornithorhynchus anatinus
TI:9258 None
   
F7CAW0_HORSE
Ensembl»
0.0
FAM50B Family with sequence similarity 50 member B Equus caballus
TI:9796 None
   
FA50A_DANRE
ZFIN»
2.9
fam50a Protein FAM50A Danio rerio
TI:7955 None
 
FA50A_HUMAN
Ensembl»
2.4
FAM50A Protein FAM50A (Protein HXC-26) (Protein XAP-5) Homo sapiens
TI:9606 None
 
FA50A_MOUSE
Ensembl»
0.0
Fam50a Protein FAM50A (Protein XAP-5) Mus musculus
TI:10090 None
 
FA50A_XENTR
CTD»
0.0
fam50a Protein FAM50A Xenopus tropicalis
TI:8364 None
 
FA50B_HUMAN
Ensembl»
0.5
FAM50B Protein FAM50B (Protein XAP-5-like) Homo sapiens
TI:9606 None
 
FA50B_MOUSE
Ensembl»
0.0
Fam50b Protein FAM50B (Protein XAP-5-like) Mus musculus
TI:10090 None
 
FAM50_ANOGA
EnsemblMetazoa»
0.0
AGAP002062 Protein FAM50 homolog Anopheles gambiae
TI:7165 None
 
FAM50_CAEBR
WormBase»
0.0
CBG04561 Protein FAM50 homolog Caenorhabditis briggsae
TI:6238 None
 
FAM50_CAEEL
WormBase»
0.5
C47E8.4 Protein FAM50 homolog Caenorhabditis elegans
TI:6239 None
 
FAM50_DICDI
dictyBase»
0.5
fam50 Protein FAM50 homolog Dictyostelium discoideum
TI:44689 None
 
FAM50_DROME
FlyBase»
1.0
CG12259 Protein FAM50 homolog Drosophila melanogaster
TI:7227 None
 
FAM50_SCHPO
PomBase»
1.8
xap5 FAM50 family protein C1020.12c Schizosaccharomyces pombe
TI:4896 None
 
G1KDX7_ANOCA
Ensembl»
0.0
fam50a Family with sequence similarity 50 member A Anolis carolinensis
TI:28377 None
   
G3RCC8_GORGO
Ensembl»
0.0
Family with sequence similarity 50 member A Gorilla gorilla
TI:9593 None
 
G3V9M8_RAT
RGD»
1.0
Fam50a Family with sequence similarity 50, member A Rattus norvegicus
TI:10116 None
   
G7LAJ6_MEDTR
EnsemblPlants»
0.0
11410133 Putative XAP5 protein
(XAP5 circadian timekeeper)		 Medicago truncatula
TI:3880 None
 
G7MQH3_MACMU
Ensembl»
0.0
FAM50B Family with sequence similarity
50 member B (Protein FAM50B)		 Macaca mulatta
TI:9544 None
 
H2L7Y9_ORYLA
Ensembl»
0.0
fam50a Family with sequence similarity 50 member A Oryzias latipes
TI:8090 None
   
H2QZA9_PANTR
Ensembl»
0.0
FAM50A Family with sequence similarity 50 member A
(Family with sequence similarity 50, member A)		 Pan troglodytes
TI:9598 None
 
H3G8I1_PHYRM
EnsemblProtists»
0.0
XAP5 protein Phytophthora ramorum
TI:164328 None
 
I1IS85_BRADI
EnsemblPlants»
0.0
100829960 Protein XAP5 CIRCADIAN TIMEKEEPER Brachypodium distachyon
TI:15368 None
 
I1K5R0_SOYBN
EnsemblPlants»
0.0
100810412 Protein XAP5 CIRCADIAN TIMEKEEPER Glycine max
TI:3847 None
 
I1KQ65_SOYBN
EnsemblPlants»
0.0
100814574 Protein XAP5 CIRCADIAN TIMEKEEPER Glycine max
TI:3847 None
 
I3LCK4_PIG
Ensembl»
0.0
FAM50B Family with sequence similarity 50 member B Sus scrofa
TI:9823 None
   
K3ZV31_SETIT
EnsemblPlants»
0.0
101774542 Protein XAP5 CIRCADIAN TIMEKEEPER Setaria italica
TI:4555 None
 
M0ZMX9_SOLTU
EnsemblPlants»
0.0
102584555 Protein FAM50A Solanum tuberosum
TI:4113 None
   
M3WF18_FELCA
Ensembl»
0.0
FAM50A Family with sequence similarity 50 member A Felis catus
TI:9685 None
 
M4ENE8_BRACM
EnsemblPlants»
0.0
FAM50A/XAP5 C-terminal domain-containing protein Brassica campestris
TI:3711 None
   
M4EQU2_BRACM
EnsemblPlants»
0.0
BRAPAZ1V2_A09P71090.2 FAM50A/XAP5 C-terminal domain-containing protein Brassica campestris
TI:3711 None
 
M5VRD1_PRUPE
EnsemblPlants»
0.0
PRUPE_7G010600 Protein XAP5 CIRCADIAN TIMEKEEPER Prunus persica
TI:3760 None
 
Q4WM96_ASPFU
EnsemblFungi»
0.0
AFUA_6G10680 XAP5 domain protein Aspergillus fumigatus
TI:746128 None
 
Q5BAJ6_EMENI
EnsemblFungi»
0.0
ANIA_02434 XAP5 domain
protein (AFU_orthologue AFUA_6G10680)		 Emericella nidulans
TI:162425 None
 
Q5KGP1_CRYNJ
EnsemblFungi»
0.0
CNE02860 Protein FAM50 Cryptococcus neoformans
TI:5207 None
 
Q6C2N0_YARLI
EnsemblFungi»
0.0
YALI0_F06490g YALI0F06490p Yarrowia lipolytica
TI:4952 None
 
Q7SBF2_NEUCR
EnsemblFungi»
0.0
NCU07604 XAP5 domain-containing protein Neurospora crassa
TI:5141 None
 
Q8I3G2_PLAF7
EnsemblProtists»
0.0
PF3D7_0530600 XAP-5 DNA binding protein, putative Plasmodium falciparum
TI:5833 None
 
T1G1D2_HELRO
EnsemblMetazoa»
0.0
20214880 Protein FAM50 homolog Helobdella robusta
TI:6412 None
 
W1Q0H4_AMBTC
EnsemblPlants»
0.0
AMTR_s00041p00202860 Protein XAP5 CIRCADIAN TIMEKEEPER Amborella trichopoda
TI:13333 None
 
W5FJN7_WHEAT
EnsemblPlants»
0.0
CFC21_067013 CFC21_072839 CFC21_078839 Protein XAP5 CIRCADIAN TIMEKEEPER Triticum aestivum
TI:4565 None
 
W5NBA0_LEPOC
Ensembl»
0.0
Family with sequence similarity 50 member A Lepisosteus oculatus
TI:7918 None
 
XCT_ARATH
TAIR»
4.8
XCT Protein XAP5 CIRCADIAN TIMEKEEPER Arabidopsis thaliana
TI:3702 None
 
XCT_ORYSJ
EnsemblPlants»
0.0
XCT Protein XAP5 CIRCADIAN TIMEKEEPER Oryza sativa
TI:4530 None