Collated Gene Ontology terms

Biological process: RNA binding(2014, 2015)

Molecular function: chromatin organization2014, 2019, 2023 regulation of RNA splicing2021, 2023 mRNA processing2023 RNA splicing2023 rhythmic process2023 response to red light2008, 2023 response to blue light2008, 2023 regulation of photomorphogenesis2008, 2023 regulation of circadian rhythm2008, 2023 miRNA processing2017, 2023
ethylene-activated signaling pathway2011, 2023 spermatogenesis2008 regulation of mRNA splicing, via spliceosome2022 mRNA cis splicing, via spliceosome2020 embryonic cranial skeleton morphogenesis2022 chromatin remodeling2023 central nervous system development2022

Cellular component: nucleus2006, 2008, 2009, 2010, 2015, 2021, 2023 nucleoplasm2015, 2022, 2023 midbody2023 intercellular bridge2023 endoplasmic reticulum2017, 2023 chromatin2015, 2023 membrane2023 endoplasmic reticulum membrane2023

Phylogenetic distribution

Chordates: 20/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 0/1 
Porifera: 0/0 
Choanoflagellates+: 13/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 4/4 
Hacrobia: 0/0 
Plants: 36/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2012 2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 0 2 4 6 8 10 Knownness

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
A0A8I5ZZR9_RAT
RGD»
0.0
ENSRNOG00000071146 Protein FAM50A Rattus norvegicus
TI:10116 None
   
D3Z9C2_RAT
RGD»
0.5
Fam50b Family with sequence similarity 50, member B Rattus norvegicus
TI:10116 None
   
FA50A_DANRE
ZFIN»
2.9
fam50a Protein FAM50A Danio rerio
TI:7955 None
 
FA50A_HUMAN
Ensembl»
2.4
FAM50A Protein FAM50A (Protein HXC-26) (Protein XAP-5) Homo sapiens
TI:9606 None
 
FA50A_MOUSE
Ensembl»
1.0
Fam50a Protein FAM50A (Protein XAP-5) Mus musculus
TI:10090 None
 
FA50B_HUMAN
Ensembl»
0.5
FAM50B Protein FAM50B (Protein XAP-5-like) Homo sapiens
TI:9606 None
 
FA50B_MOUSE
Ensembl»
0.5
Fam50b Protein FAM50B (Protein XAP-5-like) Mus musculus
TI:10090 None
 
FAM50_CAEEL
WormBase»
0.5
C47E8.4 Protein FAM50 homolog Caenorhabditis elegans
TI:6239 None
 
FAM50_DICDI
dictyBase»
0.5
fam50 Protein FAM50 homolog Dictyostelium discoideum
TI:44689 None
 
FAM50_DROME
FlyBase»
1.0
CG12259 Protein FAM50 homolog Drosophila melanogaster
TI:7227 None
 
FAM50_SCHPO
PomBase»
2.4
xap5 FAM50 family protein C1020.12c Schizosaccharomyces pombe
TI:4896 None
 
G3V9M8_RAT
RGD»
1.0
Fam50a Family with sequence similarity 50, member A Rattus norvegicus
TI:10116 None
   
XCT_ARATH
TAIR»
4.8
XCT Protein XAP5 CIRCADIAN TIMEKEEPER Arabidopsis thaliana
TI:3702 None