Collated Gene Ontology terms

Biological process: transcription cis-regulatory region binding(2009, 2024) histone binding(2022, 2024) histone H3K4 methyltransferase activity(2013, 2024) metal ion binding(2024) DNA-binding transcription factor activity(2024) DNA binding(2024)

Molecular function: transcription initiation-coupled chromatin remodeling2015, 2022, 2024 DNA damage response2012, 2024 response to estrogen2009, 2024 vegetative to reproductive phase transition of meristem2011, 2024 subtelomeric heterochromatin formation2021, 2022, 2024 regulation of DNA-templated transcription2013, 2024 telomere maintenance2013, 2024 chromatin organization2024 transdifferentiation2014, 2024 programmed cell death2021, 2024
intraciliary transport involved in cilium assembly2024 heterochromatin organization2023, 2024 germ cell development2014, 2024 egg-laying behavior2014, 2024 proteasome-mediated ubiquitin-dependent protein catabolic process2021 positive regulation of mitotic nuclear division2014 G2/M transition of mitotic cell cycle2014

Cellular component: Set1C/COMPASS complex2004, 2010, 2012, 2021, 2022, 2023, 2024 nucleus2005, 2006, 2009, 2011, 2012, 2014, 2022, 2024 MLL3/4 complex2012, 2016, 2017, 2021, 2024 MLL1 complex2009, 2023, 2024 nucleoplasm2011, 2014, 2023, 2024 histone methyltransferase complex2009, 2012, 2024 MLL1/2 complex2012, 2023, 2024 nucleolus2023, 2024 chromosome, telomeric region2024 ciliary tip2024
ciliary pocket collar2024 ciliary basal body2024 9+2 motile cilium2024 protein-containing complex2020 cytosol2009 chromosome2024 chromatin2004

Phylogenetic distribution

Chordates: 20/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 13/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 1/4 
Harosa: 3/4 
Hacrobia: 0/0 
Plants: 36/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
D3ZC01_RAT
RGD»
2.5
Rbbp5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Rattus norvegicus
TI:10116 None
   
RBBP5_HUMAN
Ensembl»
4.0
RBBP5 Retinoblastoma-binding protein 5
(RBBP-5) (Retinoblastoma-binding protein RBQ-3)		 Homo sapiens
TI:9606 None
 
RBBP5_MOUSE
Ensembl»
0.5
Rbbp5 Retinoblastoma-binding protein 5 (RBBP-5) Mus musculus
TI:10090 None
 
Q5ZLX3_CHICK
Ensembl»
0.0
RBBP5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Gallus gallus
TI:9031 None
 
A0A1D5QC74_MACMU
Ensembl»
0.0
RBBP5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Macaca mulatta
TI:9544 None
   
A0A2I2ZE71_GORGO
Ensembl»
0.0
RBBP5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Gorilla gorilla
TI:9593 None
 
A0A5F5XNB4_FELCA
Ensembl»
0.0
RBBP5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Felis catus
TI:9685 None
 
F6RMK8_MONDO
Ensembl»
0.0
RBBP5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Monodelphis domestica
TI:13616 None
   
F7FAW9_ORNAN
Ensembl»
0.0
RBBP5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Ornithorhynchus anatinus
TI:9258 None
   
H2RCM9_PANTR
Ensembl»
0.0
RBBP5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Pan troglodytes
TI:9598 None
 
SWD1_YEAST
SGD»
4.6
SWD1 COMPASS component SWD1 (Complex proteins associated
with SET1 protein SWD1) (Set1C component SWD1)		 Saccharomyces cerevisiae
TI:4932 None
 
A0A8D0NW66_PIG
Ensembl»
0.0
RBBP5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Sus scrofa
TI:9823 None
   
A0A8I3PRI4_CANLF
Ensembl»
0.0
RBBP5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Canis lupus
TI:9612 None
   
RBBP5_CAEEL
WormBase»
4.0
rbbp-5 Retinoblastoma-binding protein homolog 5 Caenorhabditis elegans
TI:6239 None
 
Q5BF72_EMENI
EnsemblFungi»
0.0
ANIA_00808 WD repeat protein (AFU_orthologue AFUA_1G14670) Emericella nidulans
TI:162425 None
 
A8WU06_CAEBR
WormBase»
0.0
rbbp-5 Protein CBG02573 Caenorhabditis briggsae
TI:6238 None
 
A2DH64_TRIV3
VEuPathDB»
0.0
TVAG_193500 Anaphase-promoting complex subunit
4 WD40 domain-containing protein		 Trichomonas vaginalis
TI:5722 None
 
A2DRS0_TRIV3
VEuPathDB»
0.0
TVAG_150180 Uncharacterized protein Trichomonas vaginalis
TI:5722 None
 
B6K146_SCHJY
EnsemblFungi»
0.0
SJAG_02768 Set1C complex subunit Swd1 Schizosaccharomyces japonicus
TI:4897 None
 
Q754S7_ASHGO
EnsemblFungi»
0.0
AGOS_AFL006C AFL006Cp Ashbya gossypii
TI:33169 None
 
SWD1_SCHPO
PomBase»
1.0
swd1 Set1 complex component swd1 (Set1C component swd1) (COMPASS
component swd1) (Complex proteins associated with set1 protein swd1)		 Schizosaccharomyces pombe
TI:4896 None
 
RBBP5_DROME
FlyBase»
0.0
Rbbp5 Retinoblastoma-binding protein 5 homolog Drosophila melanogaster
TI:7227 None
 
A0A251SI50_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr14g0446551 HanXRQr2_Chr14g0648701 Putative zinc finger, BED-type, Zinc finger, C2H2,
WD40/YVTN repeat-like-containing domain protein (Transcription factor WD40-like family)		 Helianthus annuus
TI:4232 None
 
F4P1V1_BATDJ
EnsemblBacteria»
0.0
BATDEDRAFT_35007 BZIP domain-containing protein Batrachochytrium dendrobatidis
TI:109871 None
 
A0A0Q3HJY6_BRADI
EnsemblPlants»
0.0
100829872 Uncharacterized protein Brachypodium distachyon
TI:15368 None
 
A0A1Z5SAU0_SORBI
EnsemblPlants»
0.0
SORBI_3001G462600 Uncharacterized protein Sorghum bicolor
TI:4558 None
 
A0A8M2BFL1_DANRE
CTD»
0.0
rbbp5 Retinoblastoma-binding protein 5 isoform X1 Danio rerio
TI:7955 None
   
Q5A7S8_CANAL
EnsemblFungi»
0.0
SWD1 COMPASS subunit protein Candida albicans
TI:5476 None
 
Q8H060_ORYSJ
EnsemblPlants»
0.0
LOC_Os03g10990 Os03g0207900 Os03g0207900 protein (Retinoblastoma-binding
protein, putative, expressed)		 Oryza sativa
TI:4530 None
 
RBBE_DICDI
dictyBase»
0.0
rbbE Retinoblastoma-binding-like protein E Dictyostelium discoideum
TI:44689 None
 
RBBP_ARATH
TAIR»
0.8
RBL Protein RBL (COMPASS-like H3K4 histone methylation complex
component RBL) (RBBP5-like protein) (AtRbBp5) (Retinoblastoma-binding protein-like)		 Arabidopsis thaliana
TI:3702 None
 
W1NLL9_AMBTC
EnsemblPlants»
0.0
AMTR_s00001p00273050 Uncharacterized protein Amborella trichopoda
TI:13333 None
 
A0A022QHX6_ERYGU
EnsemblFungi»
0.0
MIMGU_mgv1a004535mg Uncharacterized protein Erythranthe guttata
TI:4155 None
 
A0A061FX18_THECC
EnsemblPlants»
0.0
TCM_044422 Transducin/WD40 repeat-like superfamily protein Theobroma cacao
TI:3641 None
 
A0A067EM26_CITSI
Ensembl»
0.0
CISIN_1g0088442mg Uncharacterized protein Citrus sinensis
TI:2711 None
 
A0A078GSI8_BRANA
EnsemblPlants»
0.0
BnaC01g32310D (rape) hypothetical
protein (BnaC01g32310D protein)		 Brassica napus
TI:3708 None
 
A0A078HJ06_BRANA
EnsemblPlants»
0.0
BnaA01g25390D BnaA01g25390D protein Brassica napus
TI:3708 None
 
A0A0A0KR99_CUCSA
EnsemblPlants»
0.0
Csa_5G612300 Uncharacterized protein Cucumis sativus
TI:3659 None
 
A0A0K9NXL8_ZOSMR
EnsemblPlants»
0.0
ZOSMA_52G00830 Retinoblastoma-binding protein Zostera marina
TI:29655 None
 
A0A0Q3QWJ3_SETIT
EnsemblPlants»
0.0
Uncharacterized protein Setaria italica
TI:4555 None
 
A0A0R0GMD3_SOYBN
EnsemblPlants»
0.0
100816297 Uncharacterized protein Glycine max
TI:3847 None
 
A0A0R0JNH9_SOYBN
EnsemblPlants»
0.0
GLYMA_06G315900 Uncharacterized protein Glycine max
TI:3847 None
 
A0A1S3Z1G2_TOBAC
EnsemblFungi»
0.0
LOC107781895 Protein RBL-like isoform X1 Nicotiana tabacum
TI:4097 None
   
A0A1S4CB50_TOBAC
EnsemblFungi»
0.0
LOC107817105 Protein RBL-like isoform X1 Nicotiana tabacum
TI:4097 None
   
A0A1S4H5C8_ANOGA
EnsemblMetazoa»
0.0
Uncharacterized protein Anopheles gambiae
TI:7165 None
 
A0A1U8AXX6_NELNU
EnsemblBacteria»
0.0
LOC104607600 Protein RBL Nelumbo nucifera
TI:4432 None
 
A0A1U8B7W5_NELNU
EnsemblBacteria»
0.0
LOC104611675 Protein RBL-like Nelumbo nucifera
TI:4432 None
 
A0A1U8M9W6_GOSHI
Ensembl»
0.0
LOC107935533 Protein RBL-like Gossypium hirsutum
TI:3635 None
   
A0A1U8P5D7_GOSHI
Ensembl»
0.0
LOC107954465 Protein RBL-like Gossypium hirsutum
TI:3635 None
   
A0A1Y1ISZ9_KLENI
EnsemblPlants»
0.0
KFL_007620040 WD40 repeat protein Klebsormidium nitens
TI:105231 None
 
A0A251TW65_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr09g0259631 HanXRQr2_Chr09g0391551 Putative transducin/WD40 repeat-like superfamily
protein (Transcription factor WD40-like family)		 Helianthus annuus
TI:4232 None
 
A0A2A6CX09_PRIPA
EnsemblMetazoa»
0.0
WBGene00091516 Rbbp-5 Pristionchus pacificus
TI:54126 None
 
A0A2C9UQ04_MANES
EnsemblPlants»
0.0
MANES_13G078700 Uncharacterized protein Manihot esculenta
TI:3983 None
 
A0A2I4HHE9_JUGRE
EnsemblPlants»
0.0
LOC109017847 Protein RBL isoform X1 Juglans regia
TI:51240 None
 
A0A2K1JQT2_PHYPA
EnsemblPlants»
0.0
PHYPA_016280 Anaphase-promoting complex subunit
4 WD40 domain-containing protein		 Physcomitrium patens
TI:3218 None
 
A0A2K1KML8_PHYPA
EnsemblPlants»
0.0
PHYPA_005907 Uncharacterized protein Physcomitrium patens
TI:3218 None
 
A0A2K3DYL9_CHLRE
EnsemblPlants»
0.0
CHLRE_03g195750v5 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Chlamydomonas reinhardtii
TI:3055 None
 
A0A2R6X9H5_MARPO
EnsemblPlants»
0.0
MARPO_0028s0049 Uncharacterized protein Marchantia polymorpha
TI:3197 None
 
A0A317YBL4_MAIZE
EnsemblPlants»
0.0
RBL Protein RBL Zea mays
TI:4577 None
 
A0A3B3I1P7_ORYLA
Ensembl»
0.0
rbbp5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Oryzias latipes
TI:8090 None
   
A0A3B6HNB1_WHEAT
EnsemblPlants»
0.0
CFC21_051291 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A3B6ITZ7_WHEAT
EnsemblPlants»
0.0
Uncharacterized protein Triticum aestivum
TI:4565 None
   
A0A3B6JLE4_WHEAT
EnsemblPlants»
0.0
CFC21_065471 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A3Q7EN42_SOLLC
EnsemblPlants»
0.0
Uncharacterized protein Solanum lycopersicum
TI:4081 None
   
A0A7M7SVB1_STRPU
EnsemblMetazoa»
0.0
Retinoblastoma-binding protein 5 Strongylocentrotus purpuratus
TI:7668 None
   
A7EKS9_SCLS1
EnsemblFungi»
0.0
SS1G_05926 Uncharacterized protein Sclerotinia sclerotiorum
TI:5180 None
 
A7RYD1_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g31888 Retinoblastoma-binding protein 5 Nematostella vectensis
TI:45351 None
 
B3SCU4_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_33540 Anaphase-promoting complex subunit
4 WD40 domain-containing protein		 Trichoplax adhaerens
TI:10228 None
 
B9GHA4_POPTR
EnsemblPlants»
0.0
POPTR_001G305500 Uncharacterized protein Populus trichocarpa
TI:3694 None
 
B9SA71_RICCO
EnsemblBacteria»
0.0
RCOM_0862780 Nucleotide binding protein, putative Ricinus communis
TI:3988 None
 
D6WGH2_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_03004 Retinoblastoma-binding protein
5 homolog-like Protein		 Tribolium castaneum
TI:7070 None
 
D8RR87_SELML
EnsemblPlants»
0.0
SELMODRAFT_413979 Minichromosome loss protein Mcl1
middle region domain-containing protein		 Selaginella moellendorffii
TI:88036 None
 
D8RX51_SELML
EnsemblPlants»
0.0
SELMODRAFT_103410 Uncharacterized protein Selaginella moellendorffii
TI:88036 None
 
E3LBL6_PUCGT
EnsemblFungi»
0.0
PGTG_20001 Chromatin binding protein Puccinia graminis
TI:5297 None
 
E9GS67_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_321168 Uncharacterized protein Daphnia pulex
TI:6669 None
 
F0ZVI4_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_82100 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Dictyostelium purpureum
TI:5786 None
 
F2DIB6_HORVV
EnsemblPlants»
0.0
Predicted protein Hordeum vulgare
TI:4513 None
 
F6GVB5_VITVI
EnsemblPlants»
0.0
VIT_15s0021g01350 Uncharacterized protein Vitis vinifera
TI:29760 None
 
F6WY47_CIOIN
Ensembl»
0.0
Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Ciona intestinalis
TI:7719 None
   
G7L7T0_MEDTR
EnsemblPlants»
0.0
11409786 Putative transcription factor
WD40-like family (Retinoblastoma-binding-like protein)		 Medicago truncatula
TI:3880 None
 
G7L7T3_MEDTR
EnsemblPlants»
0.0
25501141 Retinoblastoma-binding-like protein Medicago truncatula
TI:3880 None
 
H3GGV1_PHYRM
EnsemblProtists»
0.0
Minichromosome loss protein Mcl1
middle region domain-containing protein		 Phytophthora ramorum
TI:164328 None
 
K4A759_SETIT
EnsemblPlants»
0.0
Uncharacterized protein Setaria italica
TI:4555 None
 
K7KJV9_SOYBN
EnsemblPlants»
0.0
100818581 Uncharacterized protein Glycine max
TI:3847 None
 
K7KNW5_SOYBN
EnsemblPlants»
0.0
100811475 Uncharacterized protein Glycine max
TI:3847 None
 
K7L897_SOYBN
EnsemblPlants»
0.0
100786748 Uncharacterized protein Glycine max
TI:3847 None
 
M1CMP6_SOLTU
EnsemblPlants»
0.0
Nucleotide binding protein Solanum tuberosum
TI:4113 None
   
M4E554_BRACM
EnsemblPlants»
0.0
Uncharacterized protein Brassica campestris
TI:3711 None
   
M5WBL3_PRUPE
EnsemblPlants»
0.0
PRUPE_5G058900 Uncharacterized protein Prunus persica
TI:3760 None
 
Q1S5M0_MEDTR
EnsemblPlants»
0.0
11407712 Putative transcription factor
WD40-like family (Retinoblastoma-binding-like protein)		 Medicago truncatula
TI:3880 None
 
Q4WRY4_ASPFU
EnsemblFungi»
0.0
AFUA_1G14670 WD repeat protein Aspergillus fumigatus
TI:746128 None
 
Q5KKF8_CRYNJ
EnsemblFungi»
0.0
CNC03150 Transcriptional activator, putative Cryptococcus neoformans
TI:5207 None
 
Q6CB07_YARLI
EnsemblFungi»
0.0
YALI0_C22858g YALI0C22858p Yarrowia lipolytica
TI:4952 None
 
Q7SDM9_NEUCR
EnsemblFungi»
0.0
NCU02104 WD domain-containing protein Neurospora crassa
TI:5141 None
 
Q8IC38_PLAF7
EnsemblProtists»
0.0
PF3D7_0703200 Uncharacterized protein Plasmodium falciparum
TI:5833 None
 
T1FN14_HELRO
EnsemblMetazoa»
0.0
20210213 Uncharacterized protein Helobdella robusta
TI:6412 None
 
U5FF12_POPTR
EnsemblPlants»
0.0
POPTR_019G000900 Uncharacterized protein Populus trichocarpa
TI:3694 None
 
W5N041_LEPOC
Ensembl»
0.0
RB binding protein 5,
histone lysine methyltransferase complex subunit		 Lepisosteus oculatus
TI:7918 None
 
A0A2I4HHC8_JUGRE
EnsemblPlants»
0.0
LOC109017847 Protein RBL isoform X2 Juglans regia
TI:51240 None
   
A0A803T2J8_ANOCA
Ensembl»
0.0
RBBP5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Anolis carolinensis
TI:28377 None
   
A0A804IIF6_MUSAM
EnsemblPlants»
0.0
GSMUA_187310.1 (wild Malaysian banana) hypothetical protein Musa acuminata
TI:4641 None
 
A0A8J1MDE2_XENLA
Xenbase»
0.0
rbbp5.S Retinoblastoma binding protein 5
S homeolog isoform X1		 Xenopus laevis
TI:8355 None
   
A0A9J7L9X1_BRAFL
CTD»
0.0
LOC118417448 Retinoblastoma-binding protein 5 homolog Branchiostoma floridae
TI:7739 None
   
B7PWV2_IXOSC
EnsemblMetazoa»
0.0
IscW_ISCW019990 Retinoblastoma binding protein, putative Ixodes scapularis
TI:6945 None
 
B8C7G9_THAPS
EnsemblProtists»
0.0
THAPSDRAFT_17952 Uncharacterized protein Thalassiosira pseudonana
TI:35128 None
 
F6QZB2_XENTR
Xenbase»
0.0
rbbp5 Retinoblastoma-binding protein 5 (Retinoblastoma-binding
protein 5 isoform X1)		 Xenopus tropicalis
TI:8364 None
   
G7KE36_MEDTR
EnsemblPlants»
0.0
MTR_5g069620 Retinoblastoma-binding-like protein Medicago truncatula
TI:3880 None