Collated Gene Ontology terms

Biological process: transcription cis-regulatory region binding(2009, 2024) histone binding(2022, 2024) histone H3K4 methyltransferase activity(2013, 2024) metal ion binding(2024) DNA-binding transcription factor activity(2024) DNA binding(2024)

Molecular function: transcription initiation-coupled chromatin remodeling2015, 2022, 2024 DNA damage response2012, 2024 response to estrogen2009, 2024 vegetative to reproductive phase transition of meristem2011, 2024 subtelomeric heterochromatin formation2021, 2022, 2024 regulation of DNA-templated transcription2013, 2024 telomere maintenance2013, 2024 chromatin organization2024 transdifferentiation2014, 2024 programmed cell death2021, 2024
intraciliary transport involved in cilium assembly2024 heterochromatin organization2023, 2024 germ cell development2014, 2024 egg-laying behavior2014, 2024 proteasome-mediated ubiquitin-dependent protein catabolic process2021 positive regulation of mitotic nuclear division2014 G2/M transition of mitotic cell cycle2014

Cellular component: Set1C/COMPASS complex2004, 2010, 2012, 2021, 2022, 2023, 2024 nucleus2005, 2006, 2009, 2011, 2012, 2014, 2022, 2024 MLL3/4 complex2012, 2016, 2017, 2021, 2024 MLL1 complex2009, 2023, 2024 nucleoplasm2011, 2014, 2023, 2024 histone methyltransferase complex2009, 2012, 2024 MLL1/2 complex2012, 2023, 2024 nucleolus2023, 2024 chromosome, telomeric region2024 ciliary tip2024
ciliary pocket collar2024 ciliary basal body2024 9+2 motile cilium2024 protein-containing complex2020 cytosol2009 chromosome2024 chromatin2004

Phylogenetic distribution

Chordates: 20/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 13/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 1/4 
Harosa: 3/4 
Hacrobia: 0/0 
Plants: 36/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
SWD1_YEAST
SGD»
4.6
SWD1 COMPASS component SWD1 (Complex proteins associated
with SET1 protein SWD1) (Set1C component SWD1)		 Saccharomyces cerevisiae
TI:4932 None
 
RBBP_ARATH
TAIR»
0.8
RBL Protein RBL (COMPASS-like H3K4 histone methylation complex
component RBL) (RBBP5-like protein) (AtRbBp5) (Retinoblastoma-binding protein-like)		 Arabidopsis thaliana
TI:3702 None
 
D3ZC01_RAT
RGD»
2.5
Rbbp5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Rattus norvegicus
TI:10116 None
   
Q5ZLX3_CHICK
Ensembl»
0.0
RBBP5 RB binding protein 5,
histone lysine methyltransferase complex subunit		 Gallus gallus
TI:9031 None
 
RBBP5_HUMAN
Ensembl»
4.0
RBBP5 Retinoblastoma-binding protein 5
(RBBP-5) (Retinoblastoma-binding protein RBQ-3)		 Homo sapiens
TI:9606 None
 
RBBP5_MOUSE
Ensembl»
0.5
Rbbp5 Retinoblastoma-binding protein 5 (RBBP-5) Mus musculus
TI:10090 None
 
RBBP5_DROME
FlyBase»
0.0
Rbbp5 Retinoblastoma-binding protein 5 homolog Drosophila melanogaster
TI:7227 None
 
A0A8M2BFL1_DANRE
CTD»
0.0
rbbp5 Retinoblastoma-binding protein 5 isoform X1 Danio rerio
TI:7955 None
   
RBBP5_CAEEL
WormBase»
4.0
rbbp-5 Retinoblastoma-binding protein homolog 5 Caenorhabditis elegans
TI:6239 None
 
RBBE_DICDI
dictyBase»
0.0
rbbE Retinoblastoma-binding-like protein E Dictyostelium discoideum
TI:44689 None
 
SWD1_SCHPO
PomBase»
1.0
swd1 Set1 complex component swd1 (Set1C component swd1) (COMPASS
component swd1) (Complex proteins associated with set1 protein swd1)		 Schizosaccharomyces pombe
TI:4896 None