Standard knownness: 3.7; Custom knownness: None; Num. species: 93; Orthology database: Panther18.0; Protein members: 127
Molecular function:
snoRNA splicing2013, 2017, 2023
mRNA processing2023
RNA splicing2023
protein ubiquitination2014, 2018, 2022, 2023
macromolecule metabolic process2023
mRNA splicing, via spliceosome2013, 2015, 2019, 2023
negative regulation of chemokine-mediated signaling pathway2018, 2023
regulation of macromolecule metabolic process2023
generation of catalytic spliceosome for first transesterification step2012, 2023
DNA repair2023
DNA damage response2023
mRNA metabolic process2023
cellular nitrogen compound metabolic process2023
regulation of RNA splicing2015
neuron differentiation2013
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
mRNA cis splicing, via spliceosome2005
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
Cellular component: U2-type spliceosomal complex2009, 2015, 2017, 2023 nucleus2008, 2009, 2012, 2013, 2018, 2019, 2023 spliceosomal complex2013, 2020, 2023 U2-type precatalytic spliceosome2019, 2023 nucleoplasm2022, 2023 nuclear speck2023 membrane2023 cellular anatomical entity2023
Chordates: | 21/21 | |
Echinoderms: | 0/0 | |
Hemichordates: | 1/1 | |
Annelids: | 1/1 | |
Molluscs: | 0/0 | |
Bryozoans: | 0/0 | |
Platyhelminthes: | 0/0 | |
Rotifers: | 0/0 | |
Nematodes: | 3/3 | |
Arthropods: | 5/5 | |
Tardigrades: | 0/0 | |
Placozoa: | 1/1 | |
Cnidaria: | 1/1 | |
Porifera: | 0/0 | |
Choanoflagellates+: | 16/1 | |
Dikarya: | 0/14 | |
Fungi (other): | 0/1 | |
Protozoa: | 3/3 | |
Excavates: | 0/4 | |
Harosa: | 4/4 | |
Hacrobia: | 0/0 | |
Plants: | 37/39 | |
Archea: | 0/8 | |
Bacteria: | 0/35 |
UniProt ID Organism DB» |
Standard knownness | clustom knownness | Gene name | Description | Species [Show all] | GO terms | Seq. links | Protein domain links | |||||
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Q9VDP8_DROME FlyBase» |
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mdlc | CG4973 protein (CG4973-PA) (LD35003p) (Midlife crisis) |
Drosophila melanogaster TI:7227 None |
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R113A_HUMAN Ensembl» |
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RNF113A | E3 ubiquitin-protein ligase RNF113A (EC 2.3.2.27) (Cwc24 homolog) (RING finger protein 113A) (Zinc finger protein 183) |
Homo sapiens TI:9606 None |
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CWC24_YEAST SGD» |
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CWC24 | Pre-mRNA-splicing factor CWC24 (Complexed with CEF1 protein 24) |
Saccharomyces cerevisiae TI:4932 None |
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CWC24_SCHPO PomBase» |
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cwf24 | Pre-mRNA-splicing factor cwf24 (Complexed with cdc5 protein 24) |
Schizosaccharomyces pombe TI:4896 None |
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RN113_CAEEL WormBase» |
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rnf-113 | Probable E3 ubiquitin-protein ligase rnf113 (EC 2.3.2.27) (RING finger protein 113 homolog) |
Caenorhabditis elegans TI:6239 None |
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RN113_DICDI dictyBase» |
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rnf113 | RING finger protein 113 homolog |
Dictyostelium discoideum TI:44689 None |
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Q6DRF0_DANRE ZFIN» |
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wu:fj91a07 | RING finger protein 113A (Zinc finger protein 183-like 1) |
Danio rerio TI:7955 None |
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R113B_HUMAN Ensembl» |
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RNF113B | RING finger protein 113B (Zinc finger protein 183-like 1) |
Homo sapiens TI:9606 None |
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A0A178UZR1_ARATH TAIR» |
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At4g01023 | RING/U-box superfamily protein |
Arabidopsis thaliana TI:3702 None |
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Q5PPN1_RAT RGD» |
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Rnf113a1 | Ring finger protein 113A1 |
Rattus norvegicus TI:10116 None |
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Q8R3P8_MOUSE Ensembl» |
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Rnf113a1 | Ring finger protein 113A1 |
Mus musculus TI:10090 None |
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Q14B01_MOUSE Ensembl» |
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Rnf113a2 | Ring finger protein 113A2 |
Mus musculus TI:10090 None |
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Q67ER1_RAT RGD» |
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Rnf113a2 | Ring finger protein 113A2 |
Rattus norvegicus TI:10116 None |
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A0A8V0ZLA4_CHICK Ensembl» |
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RNF113B | Ring finger protein 113B |
Gallus gallus TI:9031 None |
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C3H1_ARATH TAIR» |
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At1g01350 | Zinc finger CCCH domain-containing protein 1 (AtC3H1) |
Arabidopsis thaliana TI:3702 None |
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C3H51_ARATH TAIR» |
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At5g06420 | Zinc finger CCCH domain-containing protein 51 (AtC3H51) |
Arabidopsis thaliana TI:3702 None |
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