Standard knownness: 3.7; Custom knownness: None; Num. species: 93; Orthology database: Panther19.0; Protein members: 128
Molecular function:
snoRNA splicing2013, 2017, 2024
mRNA processing2024
RNA splicing2024
protein ubiquitination2014, 2018, 2024
mRNA splicing, via spliceosome2013, 2015, 2019, 2024
negative regulation of chemokine-mediated signaling pathway2018, 2024
regulation of macromolecule metabolic process2024
generation of catalytic spliceosome for first transesterification step2013, 2024
DNA repair2024
mRNA metabolic process2024
regulation of RNA splicing2015
neuron differentiation2013
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
mRNA cis splicing, via spliceosome2005
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
Cellular component: U2-type spliceosomal complex2013, 2015, 2017, 2024 nucleus2009, 2012, 2013, 2018, 2019, 2024 spliceosomal complex2013, 2020, 2024 U2-type precatalytic spliceosome2019, 2024 nucleoplasm2022, 2023, 2024 nuclear speck2024 membrane2024
Chordates: | 22/21 | |
Echinoderms: | 0/0 | |
Hemichordates: | 1/1 | |
Annelids: | 1/1 | |
Molluscs: | 0/0 | |
Bryozoans: | 0/0 | |
Platyhelminthes: | 0/0 | |
Rotifers: | 0/0 | |
Nematodes: | 3/3 | |
Arthropods: | 5/5 | |
Tardigrades: | 0/0 | |
Placozoa: | 1/1 | |
Cnidaria: | 1/1 | |
Porifera: | 0/0 | |
Choanoflagellates+: | 14/1 | |
Dikarya: | 0/14 | |
Fungi (other): | 0/1 | |
Protozoa: | 3/3 | |
Excavates: | 1/4 | |
Harosa: | 4/4 | |
Hacrobia: | 0/0 | |
Plants: | 37/39 | |
Archea: | 0/8 | |
Bacteria: | 0/35 |
Click here to switch to the previous version of the database.
UniProt ID Organism DB» |
Standard knownness | clustom knownness | Gene name | Description | Species [Key only] | GO terms | Seq. links | Protein domain links | |||||
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R113A_HUMAN Ensembl» |
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RNF113A | E3 ubiquitin-protein ligase RNF113A (EC 2.3.2.27) (Cwc24 homolog) (RING finger protein 113A) (Zinc finger protein 183) |
Homo sapiens TI:9606 None |
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Q9VDP8_DROME FlyBase» |
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mdlc | CG4973 protein (CG4973-PA) (LD35003p) (Midlife crisis) |
Drosophila melanogaster TI:7227 None |
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CWC24_YEAST SGD» |
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CWC24 | Pre-mRNA-splicing factor CWC24 (Complexed with CEF1 protein 24) |
Saccharomyces cerevisiae TI:4932 None |
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CWC24_SCHPO PomBase» |
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cwf24 | Pre-mRNA-splicing factor cwf24 (Complexed with cdc5 protein 24) |
Schizosaccharomyces pombe TI:4896 None |
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Q5PPN1_RAT RGD» |
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Rnf113a1 | Ring finger protein 113A1 |
Rattus norvegicus TI:10116 None |
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RN113_CAEEL WormBase» |
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rnf-113 | Probable E3 ubiquitin-protein ligase rnf113 (EC 2.3.2.27) (RING finger protein 113 homolog) |
Caenorhabditis elegans TI:6239 None |
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A0A178UZR1_ARATH TAIR» |
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At4g01023 | RING/U-box superfamily protein |
Arabidopsis thaliana TI:3702 None |
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Q6DRF0_DANRE ZFIN» |
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wu:fj91a07 | RING finger protein 113A (Zinc finger protein 183-like 1) |
Danio rerio TI:7955 None |
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R113B_HUMAN Ensembl» |
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RNF113B | RING finger protein 113B (Zinc finger protein 183-like 1) |
Homo sapiens TI:9606 None |
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RN113_DICDI dictyBase» |
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rnf113 | RING finger protein 113 homolog |
Dictyostelium discoideum TI:44689 None |
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A0A022QWE9_ERYGU EnsemblFungi» |
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MIMGU_mgv1a009713mg | RING-type E3 ubiquitin transferase |
Erythranthe guttata TI:4155 None |
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A0A061EKN3_THECC EnsemblPlants» |
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TCM_020255 | Zinc finger family protein |
Theobroma cacao TI:3641 None |
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A0A061F796_THECC EnsemblPlants» |
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TCM_031427 | Zinc finger (CCCH-type/C3HC4-type RING finger) family protein, putative |
Theobroma cacao TI:3641 None |
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A0A067G2P3_CITSI Ensembl» |
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CISIN_1g020671mg | C3H1-type domain-containing protein |
Citrus sinensis TI:2711 None |
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A0A072TQE4_MEDTR EnsemblPlants» |
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MTR_8g058607 | Zinc finger C-x8-C-x5-C-x3-H type protein |
Medicago truncatula TI:3880 None |
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A0A072U502_MEDTR EnsemblPlants» |
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11434789 | Putative transcription factor C3H family (RING zinc finger protein, putative) |
Medicago truncatula TI:3880 None |
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A0A072U5J1_MEDTR EnsemblPlants» |
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MTR_7g108868 MTR_8g058593 | Zinc finger C-x8-C-x5-C-x3-H type protein |
Medicago truncatula TI:3880 None |
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A0A078FQN8_BRANA EnsemblPlants» |
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BnaC05g00630D | (rape) hypothetical protein (BnaC05g00630D protein) |
Brassica napus TI:3708 None |
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A0A078G815_BRANA EnsemblPlants» |
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BnaA01g33980D | (rape) hypothetical protein (BnaA01g33980D protein) |
Brassica napus TI:3708 None |
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A0A0A0KFS0_CUCSA EnsemblPlants» |
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Csa_6G382870 | Zinc finger CCCH domain-containing protein 1 |
Cucumis sativus TI:3659 None |
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A0A0K9PWK0_ZOSMR EnsemblPlants» |
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ZOSMA_14G00700 | Zinc finger CCCH domain-containing protein 1 |
Zostera marina TI:29655 None |
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A0A140T863_BOVIN Ensembl» |
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RNF113A | Ring finger protein 113A |
Bos taurus TI:9913 None |
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A0A1S4CMV0_TOBAC EnsemblFungi» |
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LOC107820773 | Zinc finger CCCH domain-containing protein 1-like |
Nicotiana tabacum TI:4097 None |
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A0A1S4DEQ9_TOBAC EnsemblFungi» |
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LOC107829014 | Zinc finger CCCH domain-containing protein 1-like |
Nicotiana tabacum TI:4097 None |
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A0A1U8IEL3_GOSHI Ensembl» |
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LOC107893706 | Zinc finger CCCH domain-containing protein 1-like |
Gossypium hirsutum TI:3635 None |
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A0A1U8JUK9_GOSHI Ensembl» |
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LOC107910592 | Zinc finger CCCH domain-containing protein 1-like isoform X1 |
Gossypium hirsutum TI:3635 None |
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A0A1U8Q8A7_NELNU EnsemblBacteria» |
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LOC104603278 | Zinc finger CCCH domain-containing protein 1 |
Nelumbo nucifera TI:4432 None |
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A0A1Y1HVP4_KLENI EnsemblPlants» |
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KFL_001200240 | C3H1-type domain-containing protein |
Klebsormidium nitens TI:105231 None |
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A0A251LWF8_MANES EnsemblPlants» |
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MANES_02G115900 | C3H1-type domain-containing protein |
Manihot esculenta TI:3983 None |
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A0A251N9A3_PRUPE EnsemblPlants» |
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PRUPE_7G095500 | C3H1-type domain-containing protein |
Prunus persica TI:3760 None |
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A0A251NX62_PRUPE EnsemblPlants» |
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PRUPE_6G288300 | Zinc finger CCCH domain-containing protein 1 |
Prunus persica TI:3760 None |
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A0A251UG64_HELAN EnsemblPlants» |
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R113B | Putative RING finger protein (Transcription factor C3H family) |
Helianthus annuus TI:4232 None |
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A0A251V0X4_HELAN EnsemblPlants» |
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HannXRQ_Chr04g0120251 HanXRQr2_Chr04g0182251 | Putative zinc finger (CCCH-type/C3HC4-type RING finger) family protein (Transcription factor C3H family) |
Helianthus annuus TI:4232 None |
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A0A287BM93_PIG Ensembl» |
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RNF113B | Ring finger protein 113A |
Sus scrofa TI:9823 None |
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A0A2G3A9I4_CAPAN EnsemblPlants» |
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T459_05983 | RING-type E3 ubiquitin transferase (EC 2.3.2.27) |
Capsicum annuum TI:4072 None |
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A0A2I4DUT4_JUGRE EnsemblPlants» |
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LOC118344279 | Zinc finger CCCH domain-containing protein 1-like (Zinc finger CCCH domain-containing protein 1-like isoform X2) |
Juglans regia TI:51240 None |
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A0A2I4F8E7_JUGRE EnsemblPlants» |
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LOC108996460 | Zinc finger CCCH domain-containing protein 1-like |
Juglans regia TI:51240 None |
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A0A2K1XT33_POPTR EnsemblPlants» |
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POPTR_014G097300 | C3H family protein |
Populus trichocarpa TI:3694 None |
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A0A2K3DMB1_CHLRE EnsemblPlants» |
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CHLRE_06g254650v5 | Uncharacterized protein |
Chlamydomonas reinhardtii TI:3055 None |
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A0A2R6WQP1_MARPO EnsemblPlants» |
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MARPO_0066s0113 | RING-type E3 ubiquitin transferase |
Marchantia polymorpha TI:3197 None |
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A0A3B6HSX0_WHEAT EnsemblPlants» |
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Zinc finger CCCH domain-containing protein 1 |
Triticum aestivum TI:4565 None |
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A0A3B6ISV0_WHEAT EnsemblPlants» |
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CFC21_058188 | Zinc finger CCCH domain-containing protein 1 |
Triticum aestivum TI:4565 None |
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A0A3B6JMH3_WHEAT EnsemblPlants» |
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CFC21_062264 | Uncharacterized protein |
Triticum aestivum TI:4565 None |
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A0A3B6PQJ0_WHEAT EnsemblPlants» |
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CFC21_088848 | Uncharacterized protein |
Triticum aestivum TI:4565 None |
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A0A3P6A7H4_BRACM EnsemblPlants» |
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BRAA02T07420Z BRAPAZ1V2_A02P30040.2 | RING-type domain-containing protein |
Brassica campestris TI:3711 None |
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A0A3Q7F805_SOLLC EnsemblPlants» |
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RING-type E3 ubiquitin transferase (EC 2.3.2.27) |
Solanum lycopersicum TI:4081 None |
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A0A5F8AAN5_MACMU Ensembl» |
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RNF113B | Ring finger protein 113B |
Macaca mulatta TI:9544 None |
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A0A5F8GS30_MONDO Ensembl» |
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Ring finger protein 113A |
Monodelphis domestica TI:13616 None |
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A0A6P9EHM2_JUGRE EnsemblPlants» |
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LOC108983656 | Zinc finger CCCH domain-containing protein 1-like isoform X1 |
Juglans regia TI:51240 None |
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A0A7M7NXP4_STRPU EnsemblMetazoa» |
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RING finger protein 113A |
Strongylocentrotus purpuratus TI:7668 None |
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A0A7M7RAQ4_STRPU EnsemblMetazoa» |
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RING finger protein 113A |
Strongylocentrotus purpuratus TI:7668 None |
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A0A804K802_MUSAM EnsemblPlants» |
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103994803 | (wild Malaysian banana) hypothetical protein |
Musa acuminata TI:4641 None |
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A0A8I3N1Q1_CANLF Ensembl» |
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Uncharacterized protein |
Canis lupus TI:9612 None |
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A0A8I3PFD4_CANLF Ensembl» |
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RNF113A | Uncharacterized protein |
Canis lupus TI:9612 None |
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A0A8R1V2S3_PRIPA EnsemblMetazoa» |
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WBGene00304693 | Zinc finger protein |
Pristionchus pacificus TI:54126 None |
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A0A8V0ZLA4_CHICK Ensembl» |
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RNF113B | Ring finger protein 113B |
Gallus gallus TI:9031 None |
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A0A9J7HDV5_BRAFL CTD» |
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LOC118403281 | E3 ubiquitin-protein ligase RNF113A-like |
Branchiostoma floridae TI:7739 None |
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A0C208_PARTE EnsemblProtists» |
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GSPATT00034302001 | Chromosome undetermined scaffold_143, whole genome shotgun sequence |
Paramecium tetraurelia TI:5888 None |
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A2D8J3_TRIV3 VEuPathDB» |
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TVAG_185490 | Pre-mRNA-splicing factor CWC24 |
Trichomonas vaginalis TI:5722 None |
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A2FRZ9_TRIV3 VEuPathDB» |
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TVAG_200630 | C3H1-type domain-containing protein |
Trichomonas vaginalis TI:5722 None |
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A3KND7_XENLA Xenbase» |
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rnf113a.S | LOC446953 protein (Ring finger protein 113A S homeolog) |
Xenopus laevis TI:8355 None |
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A7F1F7_SCLS1 VEuPathDB» |
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SS1G_11427 | Pre-mRNA-splicing factor CWC24 |
Sclerotinia sclerotiorum TI:5180 None |
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A7SUV2_NEMVE EnsemblMetazoa» |
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NEMVEDRAFT_v1g193827 | RING finger protein 113A |
Nematostella vectensis TI:45351 None |
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A9SSR1_PHYPA EnsemblPlants» |
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PHYPA_011624 | Uncharacterized protein |
Physcomitrium patens TI:3218 None |
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A9UPI2_MONBE EnsemblProtists» |
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MONBRDRAFT_2116 | RING-type E3 ubiquitin transferase |
Monosiga brevicollis TI:81824 None |
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B3RMM5_TRIAD EnsemblMetazoa» |
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TRIADDRAFT_20796 | RING finger protein 113A |
Trichoplax adhaerens TI:10228 None |
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B4FWN6_MAIZE EnsemblPlants» |
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100279943 | Zinc finger CCCH domain-containing protein 1 |
Zea mays TI:4577 None |
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B6K3C8_SCHJY EnsemblFungi» |
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SJAG_03112 | Zf-C3HC4 type /GCN5-like N acetyltransferase fusion protein |
Schizosaccharomyces japonicus TI:4897 None |
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B7QM34_IXOSC EnsemblMetazoa» |
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IscW_ISCW023200 | RING finger motif containing protein (RING finger motif containing protein (Fragment)) |
Ixodes scapularis TI:6945 None |
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B8LCU0_THAPS EnsemblProtists» |
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THAPSDRAFT_25179 | RING-type E3 ubiquitin transferase (EC 2.3.2.27) |
Thalassiosira pseudonana TI:35128 None |
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B9S849_RICCO EnsemblBacteria» |
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RCOM_0693420 | RING finger protein 113A, putative |
Ricinus communis TI:3988 None |
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B9S864_RICCO EnsemblBacteria» |
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RCOM_0694470 | RING finger protein 113A, putative |
Ricinus communis TI:3988 None |
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C3H15_ORYSJ EnsemblPlants» |
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Os02g0301000 LOC_Os02g19804 | Zinc finger CCCH domain-containing protein 15 (OsC3H15) |
Oryza sativa TI:4530 None |
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C3H1_ARATH TAIR» |
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At1g01350 | Zinc finger CCCH domain-containing protein 1 (AtC3H1) |
Arabidopsis thaliana TI:3702 None |
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C3H51_ARATH TAIR» |
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At5g06420 | Zinc finger CCCH domain-containing protein 51 (AtC3H51) |
Arabidopsis thaliana TI:3702 None |
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C4M749_ENTH1 EnsemblProtists» |
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EHI_192080 | Zinc finger protein, putative |
Entamoeba histolytica TI:5759 None |
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C5XZF5_SORBI EnsemblPlants» |
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SORBI_3004G113700 | C3H1-type domain-containing protein |
Sorghum bicolor TI:4558 None |
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CWC24_ASHGO EnsemblFungi» |
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CWC24 | Pre-mRNA-splicing factor CWC24 |
Ashbya gossypii TI:33169 None |
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CWC24_ASPFU EnsemblFungi» |
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cwc24 | Pre-mRNA-splicing factor cwc24 |
Aspergillus fumigatus TI:746128 None |
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CWC24_CANAL EnsemblFungi» |
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CWC24 | Pre-mRNA-splicing factor CWC24 |
Candida albicans TI:5476 None |
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CWC24_CRYNJ EnsemblFungi» |
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CWC24 | Pre-mRNA-splicing factor CWC24 |
Cryptococcus neoformans TI:5207 None |
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CWC24_EMENI EnsemblFungi» |
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cwc24 | Pre-mRNA-splicing factor cwc24 |
Emericella nidulans TI:162425 None |
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CWC24_NEUCR EnsemblFungi» |
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cwc-24 | Pre-mRNA-splicing factor cwc-24 |
Neurospora crassa TI:5141 None |
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CWC24_YARLI EnsemblFungi» |
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CWC24 | Pre-mRNA-splicing factor CWC24 |
Yarrowia lipolytica TI:4952 None |
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D6WQ47_TRICA EnsemblMetazoa» |
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AUGUSTUS-3.0.2_09871 | RING finger protein 113A-like Protein |
Tribolium castaneum TI:7070 None |
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D7UCN8_VITVI EnsemblPlants» |
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VIT_15s0046g01030 | Zinc finger CCCH domain-containing protein 1 |
Vitis vinifera TI:29760 None |
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D8R3K9_SELML EnsemblPlants» |
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SELMODRAFT_406998 | Zinc finger CCCH domain-containing protein 1 |
Selaginella moellendorffii TI:88036 None |
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D8SI98_SELML EnsemblPlants» |
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SELMODRAFT_422399 | Zinc finger CCCH domain-containing protein 1 |
Selaginella moellendorffii TI:88036 None |
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E3JVB9_PUCGT EnsemblFungi» |
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PGTG_01325 | Pre-mRNA-splicing factor CWC24 |
Puccinia graminis TI:5297 None |
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E9HDM0_DAPPU EnsemblMetazoa» |
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DAPPUDRAFT_112971 | Uncharacterized protein |
Daphnia pulex TI:6669 None |
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E9HPZ0_DAPPU EnsemblMetazoa» |
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EOG090X09Q6 | EOG090X09Q6 |
Daphnia pulex TI:6669 None |
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F0ZPN7_DICPU EnsemblProtists» |
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DICPUDRAFT_80146 | Zinc finger protein |
Dictyostelium purpureum TI:5786 None |
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F2DBY5_HORVV EnsemblPlants» |
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Predicted protein |
Hordeum vulgare TI:4513 None |
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F4NU83_BATDJ EnsemblBacteria» |
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BATDEDRAFT_4427 | Pre-mRNA-splicing factor CWC24 |
Batrachochytrium dendrobatidis TI:109871 None |
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F6SAN1_HORSE Ensembl» |
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LOC100055218 | Ring finger protein 113A |
Equus caballus TI:9796 None |
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F6V216_MACMU Ensembl» |
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RNF113A | RING finger protein 113A |
Macaca mulatta TI:9544 None |
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F6XY35_HORSE Ensembl» |
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RNF113A | Ring finger protein 113A |
Equus caballus TI:9796 None |
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F7E8Y2_ORNAN Ensembl» |
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RNF113A | Ring finger protein 113A |
Ornithorhynchus anatinus TI:9258 None |
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||||||
G1KMH1_ANOCA Ensembl» |
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Ring finger protein 113A |
Anolis carolinensis TI:28377 None |
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G3QIS1_GORGO Ensembl» |
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RNF113A | Ring finger protein 113A |
Gorilla gorilla TI:9593 None |
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G3RML9_GORGO Ensembl» |
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RNF113B | Ring finger protein 113B |
Gorilla gorilla TI:9593 None |
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H2LAW6_ORYLA Ensembl» |
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rnf113a | Ring finger protein 113A |
Oryzias latipes TI:8090 None |
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H2Q7R0_PANTR Ensembl» |
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RNF113B | Ring finger protein 113B |
Pan troglodytes TI:9598 None |
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H2QZ23_PANTR Ensembl» |
|
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RNF113A | Ring finger protein 113A |
Pan troglodytes TI:9598 None |
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H3GHT1_PHYRM EnsemblProtists» |
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RING-type E3 ubiquitin transferase |
Phytophthora ramorum TI:164328 None |
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I1HZA5_BRADI EnsemblPlants» |
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100840636 | C3H1-type domain-containing protein |
Brachypodium distachyon TI:15368 None |
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I1JKM9_SOYBN EnsemblPlants» |
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100817146 | C3H zinc finger protein |
Glycine max TI:3847 None |
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I1KXE8_SOYBN EnsemblPlants» |
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GLYMA_08G286000 | C3H1-type domain-containing protein |
Glycine max TI:3847 None |
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K3YU04_SETIT EnsemblPlants» |
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101769097 | RING-type E3 ubiquitin transferase |
Setaria italica TI:4555 None |
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K7KS04_SOYBN EnsemblPlants» |
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100787434 | C3H1-type domain-containing protein |
Glycine max TI:3847 None |
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M1B2E5_SOLTU EnsemblPlants» |
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102594530 | RING finger protein 113A |
Solanum tuberosum TI:4113 None |
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M3WQG9_FELCA Ensembl» |
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LOC101087675 | Ring finger protein 113A |
Felis catus TI:9685 None |
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M3X1H5_FELCA Ensembl» |
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RNF113A | Ring finger protein 113A |
Felis catus TI:9685 None |
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M3X6Z8_FELCA Ensembl» |
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Ring finger protein 113A |
Felis catus TI:9685 None |
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M4EWT3_BRACM EnsemblPlants» |
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C3H1-type domain-containing protein |
Brassica campestris TI:3711 None |
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M4F5T3_BRACM EnsemblPlants» |
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RING-type domain-containing protein |
Brassica campestris TI:3711 None |
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Q14B01_MOUSE Ensembl» |
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Rnf113a2 | Ring finger protein 113A2 |
Mus musculus TI:10090 None |
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Q28EQ7_XENTR Xenbase» |
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rnf113a | RING finger protein 113A (Zinc finger protein 183) |
Xenopus tropicalis TI:8364 None |
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Q67EQ5_CAEBR WormBase» |
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rnf-113 | Protein CBR-TAG-331 (Zinc finger protein 183) |
Caenorhabditis briggsae TI:6238 None |
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Q67EQ6_CIOIN Ensembl» |
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LOC494419 | Zinc finger protein 183 |
Ciona intestinalis TI:7719 None |
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Q67ER1_RAT RGD» |
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Rnf113a2 | Ring finger protein 113A2 |
Rattus norvegicus TI:10116 None |
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Q7QIT7_ANOGA EnsemblMetazoa» |
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1270036 | AGAP007068-PA |
Anopheles gambiae TI:7165 None |
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Q8IL33_PLAF7 EnsemblProtists» |
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PF3D7_1443800 | Pre-mRNA-splicing factor CWC24, putative |
Plasmodium falciparum TI:5833 None |
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Q8R3P8_MOUSE Ensembl» |
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Rnf113a1 | Ring finger protein 113A1 |
Mus musculus TI:10090 None |
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R113A_BOVIN CTD» |
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RNF113A | E3 ubiquitin-protein ligase RNF113A (EC 2.3.2.27) (RING finger protein 113A) (Zinc finger protein 183) |
Bos taurus TI:9913 None |
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T1FN79_HELRO EnsemblMetazoa» |
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20210277 | RING finger protein 113A |
Helobdella robusta TI:6412 None |
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W1P9C4_AMBTC EnsemblPlants» |
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AMTR_s00077p00108560 | C3H1-type domain-containing protein |
Amborella trichopoda TI:13333 None |
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W5N1K5_LEPOC Ensembl» |
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Ring finger protein 113A |
Lepisosteus oculatus TI:7918 None |
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