Collated Gene Ontology terms

Biological process: metal ion binding(2024) acyltransferase activity, transferring groups other than amino-acyl groups(2024) transferase activity(2024) transcription corepressor activity(2018, 2022, 2024) acyltransferase activity(2024) DNA binding(2022, 2024) transcription corepressor binding(2012, 2024) phosphatidylinositol binding(2011, 2024) histone acetyltransferase activity(2024) histone binding(2018, 2021)
chromatin binding2018, 2022 RNA polymerase II transcription regulatory region sequence-specific DNA binding2018 transcription cis-regulatory region binding2020 structural constituent of ribosome2024 RNA binding2024 O-acetyltransferase activity2022 L-ascorbic acid binding2024 ATP-dependent chromatin remodeler activity2023 ATP hydrolysis activity2023 2-oxoglutarate-dependent dioxygenase activity2024

Molecular function: regulation of transcription by RNA polymerase II2022 negative regulation of transcription by RNA polymerase II2012, 2022, 2024 negative regulation of DNA-templated transcription2005, 2024 chromatin remodeling2023, 2024 positive regulation of transcription by RNA polymerase II2020 translation2024 thymus epithelium morphogenesis2018 regulation of thymocyte migration2018 peripheral T cell tolerance induction2018 negative thymic T cell selection2018
humoral immune response2018 coumarin biosynthetic process2024 central tolerance induction to self antigen2018

Cellular component: nucleus2005, 2012, 2022, 2023, 2024 intracellular membrane-bounded organelle2024 Sin3-type complex2010, 2012, 2023, 2024 transcription repressor complex2005, 2024 nucleoplasm2023, 2024 ribosome2024 ribonucleoprotein complex2024 membrane2024 chromatin2023 Golgi apparatus2022

Phylogenetic distribution

Chordates: 21/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 2/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 0/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 2/4 
Hacrobia: 0/0 
Plants: 36/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
PHF12_MOUSE
Ensembl»
2.3
Phf12 PHD finger protein 12 (PHD factor 1) (Pf1) Mus musculus
TI:10090 None
 
PHF12_HUMAN
Ensembl»
4.2
PHF12 PHD finger protein 12 (PHD factor 1) (Pf1) Homo sapiens
TI:9606 None
 
F1LM99_RAT
RGD»
3.5
Phf12 PHD finger protein 12 Rattus norvegicus
TI:10116 None
   
A0A1D5PLW9_CHICK
Ensembl»
0.0
PHF12 PHD finger protein 12 Gallus gallus
TI:9031 None
   
Q9LUZ5_ARATH
TAIR»
0.5
MZN1.7 Gb|AAC80581.1 (PHD finger transcription factor) Arabidopsis thaliana
TI:3702 None
 
Q9W410_DROME
FlyBase»
1.0
PF1 GH06635p Drosophila melanogaster
TI:7227 None
 
Q18605_CAEEL
WormBase»
1.0
athp-1 PHD-type domain-containing protein Caenorhabditis elegans
TI:6239 None
 
A0A2R8RZL6_DANRE
Ensembl»
1.0
phf12b PHD finger protein 12 (PHD finger protein 12b) Danio rerio
TI:7955 None
 
E7EXI6_DANRE
ZFIN»
1.0
phf12a PHD finger protein 12 (PHD finger protein 12a) Danio rerio
TI:7955 None
 
Q86K47_DICDI
dictyBase»
1.0
DDB_G0277341 PHD zinc finger-containing protein Dictyostelium discoideum
TI:44689 None
 
F4K4G6_ARATH
TAIR»
0.0
At5g36670 RING/FYVE/PHD zinc finger superfamily protein Arabidopsis thaliana
TI:3702 None
 
Q9ZW00_ARATH
TAIR»
0.8
At1g05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type
zinc finger protein (T25N20.3)		 Arabidopsis thaliana
TI:3702 None
 
A0A1P8B7I1_ARATH
TAIR»
0.0
DL3500C Acyl-CoA N-acyltransferase with
RING/FYVE/PHD-type zinc finger protein		 Arabidopsis thaliana
TI:3702 None
 
Q9FMZ9_ARATH
TAIR»
0.0
MGI19.10 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
(Similarity to PHD-type zinc finger protein) (Uncharacterized protein At5g63900)		 Arabidopsis thaliana
TI:3702 None
 
Q19511_CAEEL
WormBase»
0.0
phf-32 Zinc finger PHD-type domain-containing protein Caenorhabditis elegans
TI:6239 None