Collated Gene Ontology terms

Biological process: transcription corepressor activity(2018, 2024, 2025) zinc ion binding(2025) metal ion binding(2025) acyltransferase activity, transferring groups other than amino-acyl groups(2025) DNA binding(2022, 2025) transferase activity(2025) acyltransferase activity(2025) protein-lysine-acetyltransferase activity(2025) phosphatidylinositol binding(2011, 2025) transcription corepressor binding(2012, 2025)
histone binding2018, 2025 chromatin binding2018, 2022 RNA polymerase II transcription regulatory region sequence-specific DNA binding2018 ubiquitin protein ligase activity2025 transcription cis-regulatory region binding2020 structural constituent of ribosome2025 nucleic acid binding2025 RNA binding2025 O-acetyltransferase activity2022 L-ascorbic acid binding2025 ATP-dependent chromatin remodeler activity2025 ATP hydrolysis activity2023 2-oxoglutarate-dependent dioxygenase activity2025

Molecular function: negative regulation of DNA-templated transcription2005, 2025 regulation of transcription by RNA polymerase II2022, 2025 negative regulation of transcription by RNA polymerase II2012, 2022, 2025 DNA-templated transcription2025 positive regulation of transcription by RNA polymerase II2020 chromatin remodeling2024, 2025 translation2025

Cellular component: nucleus2002, 2005, 2012, 2018, 2023, 2025 Sin3-type complex2010, 2012, 2023, 2025 transcription repressor complex2005, 2025 nucleoplasm2024, 2025 membrane2025 ribosome2025 ribonucleoprotein complex2025 cytoplasm2025 chromatin2024 Golgi apparatus2022

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 2/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 0/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 2/4 
Hacrobia: 0/0 
Plants: 38/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2015 2016 2017 2018 2019 2020 2021 2022 2023 2024 2025 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
PHF12_MOUSE
Ensembl»
4.3
Phf12 PHD finger protein 12 (PHD factor 1) (Pf1) Mus musculus
TI:10090 None
 
F1LM99_RAT
RGD»
3.5
Phf12 PHD finger protein 12 (PHD factor 1) Rattus norvegicus
TI:10116 None
   
PHF12_HUMAN
Ensembl»
4.2
PHF12 PHD finger protein 12 (PHD factor 1) (Pf1) Homo sapiens
TI:9606 None
 
A0A1D5PLW9_CHICK
Ensembl»
1.0
PHF12 PHD finger protein 12 (PHD factor 1) Gallus gallus
TI:9031 None
   
Q9W410_DROME
FlyBase»
1.0
PF1 PHD finger protein 12 (PHD factor 1) Drosophila melanogaster
TI:7227 None
 
A0A2R8RZL6_DANRE
ZFIN»
1.0
phf12b PHD finger protein 12 (PHD factor 1) Danio rerio
TI:7955 None
 
F4K4G6_ARATH
TAIR»
1.0
At5g36670 RING/FYVE/PHD zinc finger superfamily protein Arabidopsis thaliana
TI:3702 None
 
Q9FMZ9_ARATH
TAIR»
1.0
MGI19.10 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing
protein (Similarity to PHD-type zinc finger protein)		 Arabidopsis thaliana
TI:3702 None
 
Q9LUZ5_ARATH
TAIR»
1.0
MZN1.7 Gb|AAC80581.1 (PHD finger transcription factor) Arabidopsis thaliana
TI:3702 None
 
Q18605_CAEEL
WormBase»
1.0
athp-1 PHD-type domain-containing protein Caenorhabditis elegans
TI:6239 None
 
Q86K47_DICDI
dictyBase»
1.0
DDB_G0277341 PHD zinc finger-containing protein Dictyostelium discoideum
TI:44689 None
 
Q9ZW00_ARATH
TAIR»
0.8
At1g05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type
zinc finger protein (T25N20.3)		 Arabidopsis thaliana
TI:3702 None
 
Q19511_CAEEL
WormBase»
0.0
phf-32 Zinc finger PHD-type domain-containing protein Caenorhabditis elegans
TI:6239 None
 
A0ACD6B5C8_DANRE
ZFIN»
0.0
phf12a PHD finger protein 12 Danio rerio
TI:7955 None