Collated Gene Ontology terms

Biological process: zinc ion binding(2025) metal ion binding(2025) nucleic acid binding(2025) DNA binding(2025) RNA binding(2014)

Molecular function: RNA splicing2006, 2025 mRNA processing2025 alternative mRNA splicing, via spliceosome2024 spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)2025 mRNA splicing, via spliceosome2025

Cellular component: U12-type spliceosomal complex2006, 2024, 2025 spliceosomal complex2025 nucleus2018, 2025 nucleoplasm2015, 2017, 2024, 2025 U11/U12 snRNP2024, 2025

Phylogenetic distribution

Chordates: 20/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 0/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 0/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 0/3 
Excavates: 1/4 
Harosa: 0/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2015 2016 2017 2018 2019 2020 2021 2022 2023 2024 2025 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
A0A1L8HPV2_XENLA
Xenbase»
0.0
zmat5.S Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Xenopus laevis
TI:8355 None
   
A0A1L8HZR3_XENLA
Xenbase»
0.0
zmat5.L Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Xenopus laevis
TI:8355 None
   
A0A1S3Z3T6_TOBAC
euHCVdb»
0.0
LOC107782466 Zinc finger CCCH domain-containing protein 3 Nicotiana tabacum
TI:4097 None
   
A0A1S4C9K5_TOBAC
euHCVdb»
0.0
LOC107816580 Zinc finger CCCH domain-containing protein 3-like isoform X1
(Zinc finger CCCH domain-containing protein 3-like isoform X2)		 Nicotiana tabacum
TI:4097 None
   
A0A1U8B6D4_NELNU
euHCVdb»
0.0
LOC104611238 Zinc finger CCCH domain-containing
protein 3 isoform X1		 Nelumbo nucifera
TI:4432 None
   
A0A2I4EAN8_JUGRE
neXtProt»
0.0
LOC108987873 Zinc finger CCCH domain-containing
protein 3 isoform X3		 Juglans regia
TI:51240 None
   
A0A3B6EHQ2_WHEAT
EnsemblPlants»
0.0
LOC123060877 C3H1-type domain-containing protein Triticum aestivum
TI:4565 None
   
A0A3B6FPA4_WHEAT
EnsemblPlants»
0.0
LOC123069542 C3H1-type domain-containing protein Triticum aestivum
TI:4565 None
   
A0A3B6GUP6_WHEAT
EnsemblPlants»
0.0
LOC123078026 C3H1-type domain-containing protein Triticum aestivum
TI:4565 None
   
A0A3Q7ENY2_SOLLC
EnsemblPlants»
0.0
LOC101259582 C3H1-type domain-containing protein Solanum lycopersicum
TI:4081 None
   
A0A6I8N347_ORNAN
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Ornithorhynchus anatinus
TI:9258 None
   
A0A7M7RCI8_STRPU
EnsemblMetazoa»
0.0
Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Strongylocentrotus purpuratus
TI:7668 None
   
A0A804HN45_MUSAM
EnsemblPlants»
0.0
C3H1-type domain-containing protein Musa acuminata
TI:4641 None
   
A0A8I6WYE9_HORVV
EnsemblPlants»
0.0
LOC123443371 C3H1-type domain-containing protein Hordeum vulgare
TI:4513 None
   
A0A9J7LZV9_BRAFL
neXtProt»
0.0
LOC118425743 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Branchiostoma floridae
TI:7739 None
   
A0A9L0TBW0_HORSE
Ensembl»
0.0
Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Equus caballus
TI:9796 None
   
A0A9R0HSD2_SPIOL
neXtProt»
0.0
LOC110775802 Zinc finger CCCH domain-containing protein 3 Spinacia oleracea
TI:3562 None
   
A0ABM2ZCL7_GOSHI
neXtProt»
0.0
LOC121212173 Zinc finger CCCH domain-containing
protein 3 isoform X1		 Gossypium hirsutum
TI:3635 None
   
A0ABM2ZKV6_GOSHI
euHCVdb»
0.0
LOC107921022 Uncharacterized protein isoform X1 Gossypium hirsutum
TI:3635 None
   
A0ABM3BFQ4_GOSHI
neXtProt»
0.0
LOC107918744 Zinc finger CCCH domain-containing
protein 3 isoform X1		 Gossypium hirsutum
TI:3635 None
   
D3ZLD2_RAT
RGD»
0.0
Zmat5 Zinc finger, matrin type 5 Rattus norvegicus
TI:10116 None
   
E1C1J3_CHICK
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Gallus gallus
TI:9031 None
   
F6XU26_CIOIN
Ensembl»
0.0
ci-zf(c3h/u1like)-1 C3H1-type domain-containing protein Ciona intestinalis
TI:7719 None
   
F7BPY5_MONDO
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Monodelphis domestica
TI:13616 None
   
H2LVS3_ORYLA
Ensembl»
0.0
zmat5 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Oryzias latipes
TI:8090 None
   
H9G477_ANOCA
Ensembl»
0.0
Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Anolis carolinensis
TI:28377 None
   
M0ZSG3_SOLTU
EnsemblPlants»
0.0
Zinc finger CCCH domain-containing protein 3 Solanum tuberosum
TI:4113 None
   
M4F683_BRACM
EnsemblPlants»
0.0
C3H1-type domain-containing protein Brassica campestris
TI:3711 None
   
A0A022PSS0_ERYGU
euHCVdb»
0.0
MIMGU_mgv1a015650mg C3H1-type domain-containing protein Erythranthe guttata
TI:4155 None
 
A0A061F352_THECC
euHCVdb»
0.0
TCM_026814 C2H2 and C2HC zinc
fingers superfamily protein, putative		 Theobroma cacao
TI:3641 None
 
A0A067E275_CITSI
neXtProt»
0.0
CISIN_1g026840mg C3H1-type domain-containing protein Citrus sinensis
TI:2711 None
 
A0A0A0M1B0_CUCSA
euHCVdb»
0.0
Csa_1G560650 C3H1-type domain-containing protein Cucumis sativus
TI:3659 None
 
A0A0K9PRE8_ZOSMR
neXtProt»
0.0
ZOSMA_193G00460 Zinc finger matrin type 5 Zostera marina
TI:29655 None
 
A0A139WKW0_TRICA
neXtProt»
0.0
AUGUSTUS-3.0.2_32551 Zinc finger matrin-type protein 5-like Protein Tribolium castaneum
TI:7070 None
 
A0A1Y1I1L9_KLENI
euHCVdb»
0.0
KFL_001340260 C3H1-type domain-containing protein Klebsormidium nitens
TI:105231 None
 
A0A2C9VFA4_MANES
euHCVdb»
0.0
MANES_08G108700v8 C3H1-type domain-containing protein Manihot esculenta
TI:3983 None
 
A0A2G2XXM0_CAPAN
euHCVdb»
0.0
T459_33909 C3H1-type domain-containing protein Capsicum annuum
TI:4072 None
 
A0A2K1IZP4_PHYPA
EnsemblPlants»
0.0
LOC112295380 C3H1-type domain-containing protein Physcomitrium patens
TI:3218 None
 
A0A2K2D7M7_BRADI
EnsemblPlants»
0.0
LOC106865932 U1-type domain-containing protein Brachypodium distachyon
TI:15368 None
 
A0A2R6WVN1_MARPO
neXtProt»
0.0
MARPO_0054s0011 C3H1-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A3N7HJT6_POPTR
neXtProt»
0.0
POPTR_013G004801 C3H1-type domain-containing protein Populus trichocarpa
TI:3694 None
 
A0A9R1WCY9_LACSA
neXtProt»
0.0
LSAT_V11C200057350 C3H1-type domain-containing protein Lactuca sativa
TI:4236 None
 
A0NG46_ANOGA
EnsemblMetazoa»
0.0
AgaP_AGAP010248 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Anopheles gambiae
TI:7165 None
 
A7RM68_NEMVE
neXtProt»
0.0
NEMVEDRAFT_v1g179653 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Nematostella vectensis
TI:45351 None
 
B3S529_TRIAD
CTD»
0.0
TRIADDRAFT_59175 U1-C C2H2-type zinc
finger domain-containing protein		 Trichoplax adhaerens
TI:10228 None
 
B9RFP4_RICCO
neXtProt»
0.0
RCOM_1436190 C3H1-type domain-containing protein Ricinus communis
TI:3988 None
 
C5XFS5_SORBI
euHCVdb»
0.0
SORBI_3003G113900 C3H1-type domain-containing protein Sorghum bicolor
TI:4558 None
 
D7UA82_VITVI
euHCVdb»
0.0
VIT_14s0060g00610 C3H1-type domain-containing protein Vitis vinifera
TI:29760 None
 
E9FT63_DAPPU
euHCVdb»
0.0
DAPPUDRAFT_40787 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Daphnia pulex
TI:6669 None
 
F1RFG8_PIG
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Sus scrofa
TI:9823 None
 
F4K1A8_ARATH
TAIR»
0.0
At5g26749 C2H2 and C2HC zinc fingers superfamily protein Arabidopsis thaliana
TI:3702 None
 
F7B028_XENTR
Xenbase»
0.0
zmat5 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Xenopus tropicalis
TI:8364 None
 
I1HDY3_BRADI
EnsemblPlants»
0.0
LOC104582534 C3H1-type domain-containing protein Brachypodium distachyon
TI:15368 None
 
K7N2I8_SOYBN
EnsemblPlants»
0.0
GLYMA_20G093700 C3H1-type domain-containing protein Glycine max
TI:3847 None
 
M5WL08_PRUPE
neXtProt»
0.0
PRUPE_6G307100 Uncharacterized protein Prunus persica
TI:3760 None
 
Q4Q715_LEIMA
TubercuList»
0.0
LMJF_30_2780 C3H1-type domain-containing protein Leishmania major
TI:5664 None
 
Q4QCI3_LEIMA
TubercuList»
0.0
LMJF_21_0320 Matrin-type domain-containing protein Leishmania major
TI:5664 None
 
Q8IPW7_DROME
FlyBase»
1.8
Snrnp20 U1-C C2H2-type zinc
finger domain-containing protein		 Drosophila melanogaster
TI:7227 None
 
W1P8F0_AMBTC
neXtProt»
0.0
AMTR_s00003p00197710 C3H1-type domain-containing protein Amborella trichopoda
TI:13333 None
 
W5M7K4_LEPOC
Ensembl»
0.0
Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Lepisosteus oculatus
TI:7918 None
 
ZMAT5_BOVIN
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type protein 5 (U11/U12 small nuclear
ribonucleoprotein 20 kDa protein) (U11/U12 snRNP 20 kDa protein)		 Bos taurus
TI:9913 None
 
ZMAT5_DANRE
ZFIN»
0.0
zmat5 Zinc finger matrin-type protein 5 (U11/U12 small nuclear
ribonucleoprotein 20 kDa protein) (U11/U12 snRNP 20 kDa protein)		 Danio rerio
TI:7955 None
 
A0A078G4X2_BRANA
euHCVdb»
0.0
BnaA09g04110D (rape) hypothetical
protein (BnaA09g04110D protein)		 Brassica napus
TI:3708 None
 
A0A251SEQ6_HELAN
euHCVdb»
0.0
C3H3 Putative zinc finger CCCH domain-containing
protein 3 (Transcription factor C3H family)		 Helianthus annuus
TI:4232 None
 
B7P5K2_IXOSC
EnsemblMetazoa»
0.0
8024943 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Ixodes scapularis
TI:6945 None
 
G3QMI5_GORGO
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Gorilla gorilla
TI:9593 None
 
H9Z3L1_MACMU
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Macaca mulatta
TI:9544 None
 
I1LB10_SOYBN
EnsemblPlants»
0.0
LOC100527203 C3H1-type domain-containing protein Glycine max
TI:3847 None
 
K3XMN3_SETIT
EnsemblPlants»
0.0
LOC101773670 C3H1-type domain-containing protein Setaria italica
TI:4555 None
 
K7VP35_MAIZE
EnsemblPlants»
0.0
C3H42 C2H2 and C2HC zinc fingers
superfamily protein (C3H transcription factor)		 Zea mays
TI:4577 None
 
T1EJR0_HELRO
EnsemblMetazoa»
0.0
20196810 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Helobdella robusta
TI:6412 None
 
G7IAA7_MEDTR
EnsemblPlants»
0.0
11407508 Putative transcription factor C3H
family (U1 zinc finger protein)		 Medicago truncatula
TI:3880 None
 
C3H3_ORYSJ
EnsemblPlants»
0.0
Os01g0252200 LOC_Os01g14870 Zinc finger CCCH
domain-containing protein 3 (OsC3H3)		 Oryza sativa
TI:4530 None
 
H2QLG4_PANTR
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type protein 5 (U11/U12
small nuclear ribonucleoprotein 20 kDa protein)		 Pan troglodytes
TI:9598 None
 
ZMAT5_MOUSE
Ensembl»
0.0
Zmat5 Zinc finger matrin-type protein 5 (U11/U12 small nuclear
ribonucleoprotein 20 kDa protein) (U11/U12 snRNP 20 kDa protein)		 Mus musculus
TI:10090 None
 
ZMAT5_HUMAN
Ensembl»
2.2
ZMAT5 Zinc finger matrin-type protein 5 (U11/U12 small nuclear ribonucleoprotein
20 kDa protein) (U11/U12 snRNP 20 kDa protein) (U11/U12-20K)		 Homo sapiens
TI:9606 None