Collated Gene Ontology terms

Biological process: metal ion binding(2024) zinc ion binding(2024) DNA binding(2024) nucleic acid binding(2024) RNA binding(2014)

Molecular function: RNA splicing2006, 2024 mRNA processing2024 mRNA splicing, via spliceosome2012

Cellular component: U12-type spliceosomal complex2006, 2012, 2017, 2024 nucleoplasm2015, 2017, 2023, 2024 nucleus2024 spliceosomal complex2024 small nuclear ribonucleoprotein complex2006 membrane2024

Phylogenetic distribution

Chordates: 20/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 0/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 0/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 0/3 
Excavates: 1/4 
Harosa: 0/4 
Hacrobia: 0/0 
Plants: 35/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
A0A078G4X2_BRANA
EnsemblPlants»
0.0
BnaA09g04110D (rape) hypothetical
protein (BnaA09g04110D protein)		 Brassica napus
TI:3708 None
 
A0NG46_ANOGA
EnsemblMetazoa»
0.0
4578273 AGAP010248-PA Anopheles gambiae
TI:7165 None
 
A0A061F352_THECC
EnsemblPlants»
0.0
TCM_026814 C2H2 and C2HC zinc
fingers superfamily protein, putative		 Theobroma cacao
TI:3641 None
 
K7VP35_MAIZE
EnsemblPlants»
0.0
C3H42 C2H2 and C2HC zinc fingers
superfamily protein (C3H transcription factor)		 Zea mays
TI:4577 None
 
F4K1A8_ARATH
TAIR»
0.0
At5g26749 C2H2 and C2HC zinc fingers superfamily protein Arabidopsis thaliana
TI:3702 None
 
A0A022PSS0_ERYGU
EnsemblFungi»
0.0
MIMGU_mgv1a015650mg C3H1-type domain-containing protein Erythranthe guttata
TI:4155 None
 
A0A067E275_CITSI
Ensembl»
0.0
CISIN_1g026840mg C3H1-type domain-containing protein Citrus sinensis
TI:2711 None
 
A0A0A0M1B0_CUCSA
EnsemblPlants»
0.0
Csa_1G560650 C3H1-type domain-containing protein Cucumis sativus
TI:3659 None
 
A0A1Y1I1L9_KLENI
EnsemblPlants»
0.0
KFL_001340260 C3H1-type domain-containing protein Klebsormidium nitens
TI:105231 None
 
A0A2C9VFA4_MANES
EnsemblPlants»
0.0
MANES_08G108700 C3H1-type domain-containing protein Manihot esculenta
TI:3983 None
 
A0A2G2XXM0_CAPAN
EnsemblPlants»
0.0
T459_33909 C3H1-type domain-containing protein Capsicum annuum
TI:4072 None
 
A0A2K1IZP4_PHYPA
EnsemblPlants»
0.0
PHYPA_022627 C3H1-type domain-containing protein Physcomitrium patens
TI:3218 None
 
A0A2R6WVN1_MARPO
EnsemblPlants»
0.0
MARPO_0054s0011 C3H1-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A3B6EFY3_WHEAT
EnsemblPlants»
0.0
CFC21_034905 C3H1-type domain-containing protein Triticum aestivum
TI:4565 None
 
A0A3B6FPA4_WHEAT
EnsemblPlants»
0.0
CFC21_040932 CFC21_040937 C3H1-type domain-containing protein Triticum aestivum
TI:4565 None
 
A0A3B6GUP6_WHEAT
EnsemblPlants»
0.0
C3H1-type domain-containing protein Triticum aestivum
TI:4565 None
   
A0A3N7HJT6_POPTR
EnsemblPlants»
0.0
POPTR_013G004801 C3H1-type domain-containing protein Populus trichocarpa
TI:3694 None
 
A0A3Q7ENY2_SOLLC
EnsemblPlants»
0.0
C3H1-type domain-containing protein Solanum lycopersicum
TI:4081 None
   
A0A7M7RCI8_STRPU
EnsemblMetazoa»
0.0
C3H1-type domain-containing protein Strongylocentrotus purpuratus
TI:7668 None
   
A0A804HN45_MUSAM
EnsemblPlants»
0.0
103973489 C3H1-type domain-containing protein Musa acuminata
TI:4641 None
   
A0A8I6WYE9_HORVV
EnsemblPlants»
0.0
C3H1-type domain-containing protein Hordeum vulgare
TI:4513 None
   
A7RM68_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g179653 C3H1-type domain-containing protein Nematostella vectensis
TI:45351 None
 
B9RFP4_RICCO
EnsemblBacteria»
0.0
RCOM_1436190 C3H1-type domain-containing protein Ricinus communis
TI:3988 None
 
C5XFS5_SORBI
EnsemblPlants»
0.0
SORBI_3003G113900 C3H1-type domain-containing protein Sorghum bicolor
TI:4558 None
 
D7UA82_VITVI
EnsemblPlants»
0.0
VIT_14s0060g00610 C3H1-type domain-containing protein Vitis vinifera
TI:29760 None
 
E9FT63_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_40787 C3H1-type domain-containing protein Daphnia pulex
TI:6669 None
 
H9G477_ANOCA
Ensembl»
0.0
C3H1-type domain-containing protein Anolis carolinensis
TI:28377 None
   
I1HDY3_BRADI
EnsemblPlants»
0.0
104582534 C3H1-type domain-containing protein Brachypodium distachyon
TI:15368 None
 
I1LB10_SOYBN
EnsemblPlants»
0.0
GLYMA_10G144700 C3H1-type domain-containing protein Glycine max
TI:3847 None
 
K3XMN3_SETIT
EnsemblPlants»
0.0
101773670 C3H1-type domain-containing protein Setaria italica
TI:4555 None
 
K7N2I8_SOYBN
EnsemblPlants»
0.0
GLYMA_20G093700 C3H1-type domain-containing protein Glycine max
TI:3847 None
 
M4F683_BRACM
EnsemblPlants»
0.0
C3H1-type domain-containing protein Brassica campestris
TI:3711 None
   
Q4Q715_LEIMA
EnsemblProtists»
0.0
LMJF_30_2780 C3H1-type domain-containing protein Leishmania major
TI:5664 None
 
T1EJR0_HELRO
EnsemblMetazoa»
0.0
20196810 C3H1-type domain-containing protein Helobdella robusta
TI:6412 None
 
W1P8F0_AMBTC
EnsemblPlants»
0.0
AMTR_s00003p00197710 C3H1-type domain-containing protein Amborella trichopoda
TI:13333 None
 
Q4QCI3_LEIMA
EnsemblProtists»
0.0
LMJF_21_0320 Matrin-type domain-containing protein Leishmania major
TI:5664 None
 
G7IAA7_MEDTR
EnsemblPlants»
0.0
11407508 Putative transcription factor C3H
family (U1 zinc finger protein)		 Medicago truncatula
TI:3880 None
 
A0A251SEQ6_HELAN
EnsemblPlants»
0.0
C3H3 Putative zinc finger CCCH domain-containing
protein 3 (Transcription factor C3H family)		 Helianthus annuus
TI:4232 None
 
B3S529_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_59175 U1-C C2H2-type zinc
finger domain-containing protein		 Trichoplax adhaerens
TI:10228 None
 
Q8IPW7_DROME
FlyBase»
0.5
Dmel\CG31922 U1-C C2H2-type zinc
finger domain-containing protein		 Drosophila melanogaster
TI:7227 None
 
A0A2K2D7M7_BRADI
EnsemblPlants»
0.0
106865932 U1-type domain-containing protein Brachypodium distachyon
TI:15368 None
 
M5WL08_PRUPE
EnsemblPlants»
0.0
PRUPE_6G307100 Uncharacterized protein Prunus persica
TI:3760 None
 
A0A1S3Z3T6_TOBAC
EnsemblFungi»
0.0
LOC107782466 Zinc finger CCCH
domain-containing protein 3-like		 Nicotiana tabacum
TI:4097 None
   
A0A1U8KVC8_GOSHI
Ensembl»
0.0
LOC107921022 Zinc finger CCCH
domain-containing protein 3-like		 Gossypium hirsutum
TI:3635 None
   
C3H3_ORYSJ
EnsemblPlants»
0.0
Os01g0252200 LOC_Os01g14870 Zinc finger CCCH
domain-containing protein 3 (OsC3H3)		 Oryza sativa
TI:4530 None
 
A0A1S4C9H7_TOBAC
EnsemblFungi»
0.0
LOC107816580 Zinc finger CCCH domain-containing
protein 3-like isoform X1		 Nicotiana tabacum
TI:4097 None
   
A0A1U8B6D4_NELNU
EnsemblBacteria»
0.0
LOC104611238 Zinc finger CCCH domain-containing
protein 3 isoform X1		 Nelumbo nucifera
TI:4432 None
   
A0A2I4EAN4_JUGRE
EnsemblPlants»
0.0
LOC108987873 Zinc finger CCCH domain-containing
protein 3 isoform X1		 Juglans regia
TI:51240 None
   
A0A2I4EAN8_JUGRE
EnsemblPlants»
0.0
LOC108987873 Zinc finger CCCH domain-containing
protein 3 isoform X3		 Juglans regia
TI:51240 None
 
M0ZSG3_SOLTU
EnsemblPlants»
0.0
Zinc finger CCCH domain-containing protein 3 Solanum tuberosum
TI:4113 None
   
A0A0K9PRE8_ZOSMR
EnsemblPlants»
0.0
ZOSMA_193G00460 Zinc finger matrin type 5 Zostera marina
TI:29655 None
 
A0A6I8N347_ORNAN
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type 5 Ornithorhynchus anatinus
TI:9258 None
   
E1C1J3_CHICK
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type 5 Gallus gallus
TI:9031 None
   
F1RFG8_PIG
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type 5
(Zinc finger matrin-type protein 5)		 Sus scrofa
TI:9823 None
 
F7BPY5_MONDO
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type 5 Monodelphis domestica
TI:13616 None
   
G3QMI5_GORGO
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type 5 Gorilla gorilla
TI:9593 None
 
H2LVS3_ORYLA
Ensembl»
0.0
zmat5 Zinc finger matrin-type 5 Oryzias latipes
TI:8090 None
   
H2QLG4_PANTR
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type 5
(Zinc finger, matrin-type 5)		 Pan troglodytes
TI:9598 None
 
H9Z3L1_MACMU
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type 5
(Zinc finger matrin-type protein 5)		 Macaca mulatta
TI:9544 None
 
M3W1V1_FELCA
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type 5 Felis catus
TI:9685 None
 
W5M7K4_LEPOC
Ensembl»
0.0
Zinc finger matrin-type 5 Lepisosteus oculatus
TI:7918 None
 
A0A6I8RX62_XENTR
Xenbase»
0.0
zmat5 Zinc finger matrin-type protein 5
isoform X1 (Zinc finger, matrin-type 5)		 Xenopus tropicalis
TI:8364 None
   
ZMAT5_BOVIN
Ensembl»
0.0
ZMAT5 Zinc finger matrin-type protein 5 (U11/U12 small nuclear
ribonucleoprotein 20 kDa protein) (U11/U12 snRNP 20 kDa protein)		 Bos taurus
TI:9913 None
 
ZMAT5_DANRE
ZFIN»
0.0
zmat5 Zinc finger matrin-type protein 5 (U11/U12 small nuclear
ribonucleoprotein 20 kDa protein) (U11/U12 snRNP 20 kDa protein)		 Danio rerio
TI:7955 None
 
ZMAT5_MOUSE
Ensembl»
0.0
Zmat5 Zinc finger matrin-type protein 5 (U11/U12 small nuclear
ribonucleoprotein 20 kDa protein) (U11/U12 snRNP 20 kDa protein)		 Mus musculus
TI:10090 None
 
ZMAT5_HUMAN
Ensembl»
1.0
ZMAT5 Zinc finger matrin-type protein 5 (U11/U12 small nuclear ribonucleoprotein
20 kDa protein) (U11/U12 snRNP 20 kDa protein) (U11/U12-20K)		 Homo sapiens
TI:9606 None
 
A0A9J7LZV9_BRAFL
CTD»
0.0
LOC118425743 Zinc finger matrin-type protein 5-like Branchiostoma floridae
TI:7739 None
   
A0A139WKW0_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_32551 Zinc finger matrin-type protein 5-like Protein Tribolium castaneum
TI:7070 None
 
F6XU26_CIOIN
Ensembl»
0.0
ci-zf(c3h/u1like)-1 Zinc finger protein Ci-ZF(C3H/U1like)-1 Ciona intestinalis
TI:7719 None
   
B7P5K2_IXOSC
EnsemblMetazoa»
0.0
8024943 Zinc finger protein, putative Ixodes scapularis
TI:6945 None
 
D3ZLD2_RAT
RGD»
0.0
Zmat5 Zinc finger, matrin type 5 Rattus norvegicus
TI:10116 None
   
A0A1L8HZR3_XENLA
Xenbase»
0.0
zmat5.L Zinc finger, matrin-type 5 L homeolog Xenopus laevis
TI:8355 None
   
A0A1L8HPV2_XENLA
Xenbase»
0.0
zmat5.S Zinc finger, matrin-type 5 S homeolog isoform X1 Xenopus laevis
TI:8355 None