Collated Gene Ontology terms

Biological process: zinc ion binding(2006, 2014, 2025) metal ion binding(2025) RNA polymerase binding(2008, 2025) protein domain specific binding(2005, 2025) ubiquitin protein ligase activity(2006) nucleic acid binding(2025)

Molecular function: protein ubiquitination2025 transcription by RNA polymerase II2005, 2025 mRNA processing2005, 2025 regulation of alternative mRNA splicing, via spliceosome2006

Cellular component: nucleus2006, 2009, 2025 protein-containing complex2025 membrane2014 cytosol2009 cytoplasm2025

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 0/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 0/1 
Porifera: 0/0 
Choanoflagellates+: 7/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 0/3 
Excavates: 0/4 
Harosa: 1/4 
Hacrobia: 0/0 
Plants: 2/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2015 2016 2017 2018 2019 2020 2021 2022 2023 2024 2025 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
PHRF1_RAT
RGD»
3.2
Phrf1 PHD and RING finger domain-containing
protein 1 (CTD-binding SR-like protein rA9)		 Rattus norvegicus
TI:10116 None
 
PHRF1_MOUSE
Ensembl»
2.5
Phrf1 PHD and RING finger domain-containing protein 1 Mus musculus
TI:10090 None
 
Q9VNE0_DROME
FlyBase»
1.0
Dmel\CG2926 PHD and RING finger domain-containing protein 1 Drosophila melanogaster
TI:7227 None
 
YQF7_SCHPO
PomBase»
1.0
SPCC126.07c PHD and RING
finger domain-containing protein C126.07c		 Schizosaccharomyces pombe
TI:4896 None
 
PHRF1_HUMAN
Ensembl»
0.5
PHRF1 PHD and RING finger domain-containing protein 1 Homo sapiens
TI:9606 None
 
A0A1L8GJP5_XENLA
Xenbase»
0.0
phrf1.L PHD and RING finger
domain-containing protein 1 isoform X1		 Xenopus laevis
TI:8355 None
   
A0A1S4H5J1_ANOGA
EnsemblMetazoa»
0.0
Uncharacterized protein Anopheles gambiae
TI:7165 None
 
A0A1Y1I9C2_KLENI
neXtProt»
0.0
KFL_002500090 Uncharacterized protein Klebsormidium nitens
TI:105231 None
 
A0A2R6VXM8_MARPO
euHCVdb»
0.0
MARPO_2384s0001 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6VXW1_MARPO
euHCVdb»
0.0
MARPO_1647s0001 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6WAI2_MARPO
euHCVdb»
0.0
MARPO_0118s0003 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6WBS4_MARPO
euHCVdb»
0.0
MARPO_0113s0035 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6WEU6_MARPO
euHCVdb»
0.0
MARPO_0100s0063 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6WL29_MARPO
neXtProt»
0.0
MARPO_0079s0069 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6WMS7_MARPO
euHCVdb»
0.0
MARPO_0073s0034 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6WZ85_MARPO
euHCVdb»
0.0
MARPO_0047s0111 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6X1D9_MARPO
neXtProt»
0.0
MARPO_0042s0001 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6X8L6_MARPO
euHCVdb»
0.0
MARPO_0030s0149 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6X8V9_MARPO
euHCVdb»
0.0
MARPO_0029s0086 Zinc finger PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6X9F7_MARPO
neXtProt»
0.0
MARPO_0028s0044 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6XB89_MARPO
euHCVdb»
0.0
MARPO_0025s0067 MARPO_0082s0022 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6XFC4_MARPO
euHCVdb»
0.0
MARPO_0018s0005 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6XFD1_MARPO
euHCVdb»
0.0
MARPO_0018s0013 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6XG84_MARPO
euHCVdb»
0.0
MARPO_0016s0163 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6XN65_MARPO
euHCVdb»
0.0
MARPO_0007s0009 MARPO_0068s0061 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6XN70_MARPO
neXtProt»
0.0
MARPO_0007s0018 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6XQ42_MARPO
euHCVdb»
0.0
MARPO_0006s0235 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6XUZ6_MARPO
euHCVdb»
0.0
MARPO_0001s0002 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6XVI0_MARPO
neXtProt»
0.0
MARPO_0001s0159 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A2R6XVX6_MARPO
euHCVdb»
0.0
MARPO_0001s0272 PHD-type domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A3B3HJ09_ORYLA
Ensembl»
0.0
PHRF1 PHD and ring finger domains 1 Oryzias latipes
TI:8090 None
   
A0A5F7ZPL6_MACMU
Ensembl»
0.0
PHRF1 PHD and RING finger domain-containing protein 1 Macaca mulatta
TI:9544 None
   
A0A6I8NSH2_ORNAN
Ensembl»
0.0
PHD and ring finger domains 1 Ornithorhynchus anatinus
TI:9258 None
   
A0A6I8S7H9_XENTR
Xenbase»
0.0
phrf1 PHD and RING finger domain-containing protein 1
isoform X1 (PHD and ring finger domains 1)		 Xenopus tropicalis
TI:8364 None
   
A0A7M7P2W6_STRPU
EnsemblMetazoa»
0.0
PHD and RING finger domain-containing protein 1 Strongylocentrotus purpuratus
TI:7668 None
   
A0A7U2I579_PHANO
TubercuList»
0.0
JI435_137160 PHD-type domain-containing protein Phaeosphaeria nodorum
TI:13684 None
 
A0A8I3NQX8_CANLF
Ensembl»
0.0
PHRF1 PHD and RING finger domain-containing protein 1 Canis lupus
TI:9612 None
   
A0A8J0V9T6_XENLA
Xenbase»
0.0
phrf1.S PHD and RING finger
domain-containing protein 1 isoform X1		 Xenopus laevis
TI:8355 None
   
A0A8M2BA76_DANRE
ZFIN»
0.0
phrf1 PHD and RING finger
domain-containing protein 1 isoform X1		 Danio rerio
TI:7955 None
   
A0A8V0ZSW0_CHICK
Ensembl»
0.0
PHRF1 PHD and ring finger domains 1 Gallus gallus
TI:9031 None
   
A0A9J7KZ81_BRAFL
neXtProt»
0.0
LOC118413552 PHD and RING
finger domain-containing protein 1-like		 Branchiostoma floridae
TI:7739 None 		     
A0A9J7L0S5_BRAFL
neXtProt»
0.0
LOC118414129 Dentin sialophosphoprotein-like Branchiostoma floridae
TI:7739 None
   
A0A9J7L2L3_BRAFL
neXtProt»
0.0
LOC118414216 PHD and RING
finger domain-containing protein 1-like		 Branchiostoma floridae
TI:7739 None
   
A0ABI7W6S2_FELCA
Ensembl»
0.0
PHRF1 PHD and ring finger domains 1 Felis catus
TI:9685 None
   
A7F7S5_SCLS1
TubercuList»
0.0
SS1G_13655 PHD and RING finger domain-containing protein Sclerotinia sclerotiorum
TI:5180 None
 
A7US58_ANOGA
EnsemblMetazoa»
0.0
5667489 AGAP003504-PA Anopheles gambiae
TI:7165 None 		 
 
B3RLA0_TRIAD
CTD»
0.0
TRIADDRAFT_51933 PHD and RING finger domain-containing protein 1 Trichoplax adhaerens
TI:10228 None
 
B6JZF4_SCHJY
TubercuList»
0.0
asr1 CTD-binding SR-like protein rA9 Schizosaccharomyces japonicus
TI:4897 None
 
B7PBN3_IXOSC
EnsemblMetazoa»
0.0
IscW_ISCW002529 Uncharacterized protein Ixodes scapularis
TI:6945 None
 
C8VCR2_EMENI
TubercuList»
0.0
ANIA_07294 PHD and RING finger
domain protein, putative (AFU_orthologue AFUA_2G16870)		 Emericella nidulans
TI:162425 None
 
D6WC02_TRICA
neXtProt»
0.0
AUGUSTUS-3.0.2_05009 Uncharacterized protein Tribolium castaneum
TI:7070 None
 
E9HK85_DAPPU
euHCVdb»
0.0
DAPPUDRAFT_229111 PHD and RING finger domain-containing protein 1 Daphnia pulex
TI:6669 None
 
F6PH84_CIOIN
Ensembl»
0.0
Zinc finger protein Ciona intestinalis
TI:7719 None
   
F6SY99_CIOIN
Ensembl»
0.0
SFR19-like C-terminal domain-containing protein Ciona intestinalis
TI:7719 None 		     
F6XLW3_HORSE
Ensembl»
0.0
PHRF1 PHD and RING finger domain-containing protein 1 Equus caballus
TI:9796 None
   
G1KQK8_ANOCA
Ensembl»
0.0
PHRF1 PHD and ring finger domains 1 Anolis carolinensis
TI:28377 None
   
G3N2M4_BOVIN
Ensembl»
0.0
PHRF1 PHD and RING finger domain-containing protein 1 Bos taurus
TI:9913 None
   
G3QZ45_GORGO
Ensembl»
0.0
PHRF1 PHD and RING finger domain-containing protein 1 Gorilla gorilla
TI:9593 None
 
H2R5P2_PANTR
Ensembl»
0.0
PHRF1 PHD and RING finger domain-containing protein 1 Pan troglodytes
TI:9598 None
 
H3GR55_PHYRM
EnsemblProtists»
0.0
PHD-type domain-containing protein Phytophthora ramorum
TI:164328 None
 
H9H6G6_MONDO
Ensembl»
0.0
PHD and ring finger domains 1 Monodelphis domestica
TI:13616 None
   
I3LU11_PIG
Ensembl»
0.0
PHRF1 PHD and RING finger domain-containing protein 1 Sus scrofa
TI:9823 None
   
Q4WZH9_ASPFU
TubercuList»
0.0
AFUA_2G16870 PHD and RING finger domain protein, putative Aspergillus fumigatus
TI:746128 None
 
Q7S1Z2_NEUCR
TubercuList»
0.0
NCU07561 PHD and RING finger domain-containing protein Neurospora crassa
TI:5141 None
 
T1F9A4_HELRO
EnsemblMetazoa»
0.0
20205403 SFR19-like C-terminal domain-containing protein Helobdella robusta
TI:6412 None 		 
 
T1FQ88_HELRO
EnsemblMetazoa»
0.0
20210985 PHD-type domain-containing protein Helobdella robusta
TI:6412 None
 
T1FTY6_HELRO
EnsemblMetazoa»
0.0
20212283 Uncharacterized protein Helobdella robusta
TI:6412 None 		 
 
W5LWP0_LEPOC
Ensembl»
0.0
PHD and ring finger domains 1 Lepisosteus oculatus
TI:7918 None