Cluster UKP09636
- RNA POLYMERASE II-ASSOCIATED PROTEIN 1
Standard knownness: 0.8; Custom knownness: None; Num. species: 52; Orthology database: Panther19.0; Protein members: 56
Collated Gene Ontology terms
Biological process:
DNA binding(2024)
nucleotidyltransferase activity(2024)
zinc ion binding(2024)
metal ion binding(2024)
RNA polymerase II cis-regulatory region sequence-specific DNA binding(2024)
DNA-binding transcription factor activity(2024)
Molecular function: transcription by RNA polymerase II2005, 2013, 2015, 2024 ribosomal large subunit biogenesis2021 regulation of DNA-templated transcription2024 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
Cellular component: nucleus2009, 2024 cytoplasm2015, 2018, 2024 DNA-directed RNA polymerase complex2024 membrane2024 cytosol2009 RNA polymerase complex2006 RNA polymerase II, core complex2005
Phylogenetic distribution
| Chordates: | 22/21 |  |
| Echinoderms: | 0/0 | |
| Hemichordates: | 1/1 | |
| Annelids: | 0/1 | |
| Molluscs: | 0/0 | |
| Bryozoans: | 0/0 | |
| Platyhelminthes: | 0/0 | |
| Rotifers: | 0/0 | |
| Nematodes: | 3/3 | |
| Arthropods: | 4/5 | |
| Tardigrades: | 0/0 | |
| Placozoa: | 1/1 | |
| Cnidaria: | 1/1 | |
| Porifera: | 0/0 | |
| Choanoflagellates+: | 13/1 | |
| Dikarya: | 0/14 | |
| Fungi (other): | 0/1 | |
| Protozoa: | 3/3 | |
| Excavates: | 1/4 | |
| Harosa: | 3/4 | |
| Hacrobia: | 0/0 | |
| Plants: | 0/39 | |
| Archea: | 0/8 | |
| Bacteria: | 0/35 |
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Proteins
| UniProt ID Organism DB» |
Standard knownness | clustom knownness | Gene name | Description | Species [Key only] | GO terms | Seq. links | Protein domain links | |||||
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A0A1D8PN59_CANAL EnsemblFungi» |
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CAALFM_C501430CA orf19.11610 | RNA polymerase II-associated protein RBA50 |
Candida albicans TI:5476 None |
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A0A1L8FAF3_XENLA Xenbase» |
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rpap1.L | RNA polymerase II-associated protein 1 isoform X1 |
Xenopus laevis TI:8355 None |
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A0A287AIU1_PIG Ensembl» |
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RPAP1 | RNA polymerase II associated protein 1 |
Sus scrofa TI:9823 None |
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A0A2A6BE43_PRIPA EnsemblMetazoa» |
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WBGene00092921 | Nuclear receptor |
Pristionchus pacificus TI:54126 None |
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A0A6I8PHX6_ORNAN Ensembl» |
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RPAP1 | RNA polymerase II associated protein 1 |
Ornithorhynchus anatinus TI:9258 None |
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A0A6I8Q111_XENTR Xenbase» |
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rpap1 | RNA polymerase II-associated protein 1 (RNA polymerase II-associated protein 1 isoform X1) |
Xenopus tropicalis TI:8364 None |
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A0A7M7PRQ0_STRPU EnsemblMetazoa» |
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RNA polymerase II-associated protein 1 |
Strongylocentrotus purpuratus TI:7668 None |
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A0A8I3Q7V9_CANLF Ensembl» |
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RPAP1 | RNA polymerase II associated protein 1 |
Canis lupus TI:9612 None |
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A0A8J0TEQ2_XENLA Xenbase» |
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rpap1.S | RNA polymerase II associated protein 1 S homeolog isoform X1 |
Xenopus laevis TI:8355 None |
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A0A8V0ZBS1_CHICK Ensembl» |
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RPAP1 | RNA polymerase II associated protein 1 |
Gallus gallus TI:9031 None |
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A0A9J7LKW9_BRAFL CTD» |
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LOC118421486 | RNA polymerase II-associated protein 1-like |
Branchiostoma floridae TI:7739 None |
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A0A9J7M6T5_BRAFL CTD» |
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LOC118429305 | RNA polymerase II-associated protein 1-like |
Branchiostoma floridae TI:7739 None |
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A2FD64_TRIV3 VEuPathDB» |
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TVAG_116890 | RNA polymerase II-associated protein 1 C-terminal domain-containing protein |
Trichomonas vaginalis TI:5722 None |
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A7F3I6_SCLS1 VEuPathDB» |
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SS1G_11832 | Transcription factor Rba50 |
Sclerotinia sclerotiorum TI:5180 None |
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A7RJ67_NEMVE EnsemblMetazoa» |
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NEMVEDRAFT_v1g83376 | RNA polymerase II-associated protein 1 |
Nematostella vectensis TI:45351 None |
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A8WJK1_CAEBR WormBase» |
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CBG23910 CBG_23910 | Protein CBG23910 |
Caenorhabditis briggsae TI:6238 None |
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B3S0J8_TRIAD EnsemblMetazoa» |
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TRIADDRAFT_57076 | RNA polymerase II-associated protein 1 C-terminal domain-containing protein |
Trichoplax adhaerens TI:10228 None |
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B3S0J9_TRIAD EnsemblMetazoa» |
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TRIADDRAFT_57077 | RNA polymerase II-associated protein 1 N-terminal domain-containing protein |
Trichoplax adhaerens TI:10228 None |
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B6K754_SCHJY EnsemblFungi» |
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SJAG_04559 | RNA polymerase II associated protein |
Schizosaccharomyces japonicus TI:4897 None |
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B7PHG7_IXOSC EnsemblMetazoa» |
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IscW_ISCW018291 | RNA polymerase II-associated protein 1 C-terminal domain-containing protein |
Ixodes scapularis TI:6945 None |
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B8BQA5_THAPS EnsemblProtists» |
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THAPSDRAFT_1216 | RNA polymerase II-associated protein 1 C-terminal domain-containing protein |
Thalassiosira pseudonana TI:35128 None |
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C4MAW2_ENTH1 EnsemblProtists» |
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EHI_183890 | RNA polymerase II-associated protein 1 C-terminal domain-containing protein |
Entamoeba histolytica TI:5759 None |
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D6WZF8_TRICA EnsemblMetazoa» |
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AUGUSTUS-3.0.2_12660 | Uncharacterized protein |
Tribolium castaneum TI:7070 None |
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E3KZD9_PUCGT EnsemblFungi» |
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PGTG_15627 | RNA polymerase II-associated protein 1 C-terminal domain-containing protein |
Puccinia graminis TI:5297 None |
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E7FGQ5_DANRE ZFIN» |
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rpap1 | RNA polymerase II-associated protein 1 |
Danio rerio TI:7955 None |
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F0ZIV6_DICPU EnsemblProtists» |
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DICPUDRAFT_94382 | Uncharacterized protein |
Dictyostelium purpureum TI:5786 None |
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F4P327_BATDJ EnsemblBacteria» |
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BATDEDRAFT_88801 | RNA polymerase II-associated protein 1 C-terminal domain-containing protein |
Batrachochytrium dendrobatidis TI:109871 None |
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F5HML2_ANOGA EnsemblMetazoa» |
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11176131 | AGAP013288-PA |
Anopheles gambiae TI:7165 None |
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F6R341_HORSE Ensembl» |
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RPAP1 | RNA polymerase II associated protein 1 |
Equus caballus TI:9796 None |
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F6S9L7_CIOIN Ensembl» |
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Ras-GAP domain-containing protein |
Ciona intestinalis TI:7719 None |
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F6YC25_MONDO Ensembl» |
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RPAP1 | RNA polymerase II associated protein 1 |
Monodelphis domestica TI:13616 None |
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F7BP59_CIOIN Ensembl» |
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Uncharacterized protein |
Ciona intestinalis TI:7719 None |
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F7GYQ8_MACMU Ensembl» |
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RPAP1 | RNA polymerase II associated protein 1 |
Macaca mulatta TI:9544 None |
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G1KPH2_ANOCA Ensembl» |
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RPAP1 | RNA polymerase II associated protein 1 |
Anolis carolinensis TI:28377 None |
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G3QVU2_GORGO Ensembl» |
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RPAP1 | RNA polymerase II associated protein 1 |
Gorilla gorilla TI:9593 None |
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H2L086_CAEEL WormBase» |
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CELE_F56B3.4 F56B3.4 | RNA polymerase II-associated protein 1 N-terminal domain-containing protein |
Caenorhabditis elegans TI:6239 None |
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H2MKR8_ORYLA Ensembl» |
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rpap1 | RNA polymerase II associated protein 1 |
Oryzias latipes TI:8090 None |
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H2Q983_PANTR Ensembl» |
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RPAP1 | RNA polymerase II associated protein 1 |
Pan troglodytes TI:9598 None |
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H3GPI4_PHYRM EnsemblProtists» |
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RNA polymerase II-associated protein 1 N-terminal domain-containing protein |
Phytophthora ramorum TI:164328 None |
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M3WH98_FELCA Ensembl» |
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RPAP1 | RNA polymerase II associated protein 1 |
Felis catus TI:9685 None |
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Q4WWH9_ASPFU EnsemblFungi» |
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AFUA_3G05940 | Transcription factor Rba50, putative |
Aspergillus fumigatus TI:746128 None |
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Q54VP8_DICDI dictyBase» |
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DDB_G0280209 | Uncharacterized protein |
Dictyostelium discoideum TI:44689 None |
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Q5B9K9_EMENI EnsemblFungi» |
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ANIA_02771 | Transcription factor Rba50, putative (AFU_orthologue AFUA_3G05940) |
Emericella nidulans TI:162425 None |
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Q5KFJ8_CRYNJ EnsemblFungi» |
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CNF01500 | Cytoplasm protein, putative |
Cryptococcus neoformans TI:5207 None |
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Q6C4H3_YARLI EnsemblFungi» |
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YALI0_E26807g | YALI0E26807p |
Yarrowia lipolytica TI:4952 None |
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Q751U8_ASHGO EnsemblFungi» |
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AGOS_AFR727W | AFR727Wp |
Ashbya gossypii TI:33169 None |
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Q7S0F6_NEUCR EnsemblFungi» |
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NCU06859 | Transcription factor Rba50 |
Neurospora crassa TI:5141 None |
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Q8IJ79_PLAF7 EnsemblProtists» |
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PF3D7_1032900 | RNA polymerase II-associated protein 1, putative |
Plasmodium falciparum TI:5833 None |
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Q9VTX1_DROME FlyBase» |
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anon-69Ag | FI19811p1 |
Drosophila melanogaster TI:7227 None |
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RBA50_SCHPO PomBase» |
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rba50 | RNA polymerase II-associated protein rba50 |
Schizosaccharomyces pombe TI:4896 None |
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RBA50_YEAST SGD» |
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RBA50 | RNA polymerase II-associated protein RBA50 (RNA polymerase II-associated protein of 50 kDa) |
Saccharomyces cerevisiae TI:4932 None |
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RPAP1_BOVIN Ensembl» |
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RPAP1 | RNA polymerase II-associated protein 1 |
Bos taurus TI:9913 None |
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RPAP1_HUMAN Ensembl» |
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RPAP1 | RNA polymerase II-associated protein 1 |
Homo sapiens TI:9606 None |
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RPAP1_MOUSE Ensembl» |
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Rpap1 | RNA polymerase II-associated protein 1 |
Mus musculus TI:10090 None |
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RPAP1_RAT RGD» |
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Rpap1 | RNA polymerase II-associated protein 1 |
Rattus norvegicus TI:10116 None |
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W5NBV1_LEPOC Ensembl» |
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RNA polymerase II associated protein 1 |
Lepisosteus oculatus TI:7918 None |
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