Collated Gene Ontology terms

Biological process: U7 snRNA binding(2010, 2015, 2017, 2025) RNA binding(2023, 2025)

Molecular function: mRNA 3'-end processing by stem-loop binding and cleavage2009, 2010, 2021, 2025 regulation of chromatin organization2021, 2025 positive regulation of G1/S transition of mitotic cell cycle2014, 2025 mRNA processing2025 mRNA splicing, via spliceosome2008, 2025 nuclear histone mRNA catabolic process2024, 2025 P-body assembly2017 7-methylguanosine cap hypermethylation2024, 2025 regulation of alternative mRNA splicing, via spliceosome2006 RNA splicing2025

Cellular component: U7 snRNP2009, 2017, 2025 nucleus2006, 2009, 2025 nucleoplasm2013, 2024, 2025 telomerase holoenzyme complex2018, 2025 nuclear body2024, 2025 histone pre-mRNA 3'end processing complex2009, 2013, 2025 ribonucleoprotein complex2025 precatalytic spliceosome2017 catalytic step 2 spliceosome2017 U6 snRNP2023
U4/U6 x U5 tri-snRNP complex2020 P-body2025 Lsm1-7-Pat1 complex2023 small nuclear ribonucleoprotein complex2008 histone locus body2025

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 0/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 0/1 
Porifera: 0/0 
Choanoflagellates+: 0/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 1/4 
Hacrobia: 0/0 
Plants: 3/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2015 2016 2017 2018 2019 2020 2021 2022 2023 2024 2025 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
A0A1S4GVL4_ANOGA
EnsemblMetazoa»
0.0
Sm domain-containing protein Anopheles gambiae
TI:7165 None
 
A0A1Y1IID2_KLENI
neXtProt»
0.0
KFL_003870050 Sm domain-containing protein Klebsormidium nitens
TI:105231 None
 
A0A287A3H2_PIG
Ensembl»
0.0
LSM11 U7 snRNA-associated Sm-like protein LSm11 Sus scrofa
TI:9823 None
   
A0A2A6BYD0_PRIPA
EnsemblMetazoa»
0.0
WBGene00277078 Sm domain-containing protein Pristionchus pacificus
TI:54126 None
   
A0A2K1IRM3_PHYPA
EnsemblPlants»
0.0
LOC112274220 Sm domain-containing protein Physcomitrium patens
TI:3218 None
 
A0A2K3CZN5_CHLRE
euHCVdb»
0.0
CHLRE_13g571251v5 Sm domain-containing protein Chlamydomonas reinhardtii
TI:3055 None
 
A0A3Q2I9S9_HORSE
Ensembl»
0.0
LSM11 U7 snRNA-associated Sm-like protein LSm11 Equus caballus
TI:9796 None
   
A0A5F8AMJ5_MACMU
Ensembl»
0.0
LSM11 U7 snRNA-associated Sm-like protein LSm11 Macaca mulatta
TI:9544 None
   
A0A6I8PWH2_XENTR
Xenbase»
0.0
lsm11 LSM11, U7 small nuclear RNA associated
(U7 snRNA-associated Sm-like protein LSm11 isoform X1)		 Xenopus tropicalis
TI:8364 None
   
A0A7M7GJ12_STRPU
EnsemblMetazoa»
0.0
LSM domain-containing protein Strongylocentrotus purpuratus
TI:7668 None
   
A0A7M7NLG9_STRPU
EnsemblMetazoa»
0.0
LSM domain-containing protein Strongylocentrotus purpuratus
TI:7668 None
   
A0A8I3RQ11_CANLF
Ensembl»
0.0
LSM11 U7 snRNA-associated Sm-like protein LSm11 Canis lupus
TI:9612 None
   
A0A8V0YJU4_CHICK
Ensembl»
1.0
LSM11 LSM11, U7 small nuclear RNA associated Gallus gallus
TI:9031 None
   
A0A9J7NA18_BRAFL
euHCVdb»
0.0
LOC118429778 U7 snRNA-associated Sm-like protein LSm11 Branchiostoma floridae
TI:7739 None
   
A0ABE4MM37_XENLA
CTD»
0.0
lsm11.S U7 snRNA-associated Sm-like protein LSm11 Xenopus laevis
TI:8355 None
   
A0ABI7WTC3_FELCA
Ensembl»
0.0
LSM11 Sm domain-containing protein Felis catus
TI:9685 None
   
A1Z802_DROME
FlyBase»
3.5
Lsm11 FI05704p (Lsm11) Drosophila melanogaster
TI:7227 None
 
A6HDQ3_RAT
RGD»
2.0
Lsm11 U7 snRNA-associated Sm-like protein LSm11 Rattus norvegicus
TI:10116 None
 
A8XRH3_CAEBR
WormBase»
0.0
CBG17705 CBG_17705 Protein CBG17705 Caenorhabditis briggsae
TI:6238 None
 
B3RMX7_TRIAD
CTD»
0.0
TRIADDRAFT_52963 LSM domain-containing protein Trichoplax adhaerens
TI:10228 None
 
B5YLR2_THAPS
euHCVdb»
0.0
THAPS_10869 Sm domain-containing protein Thalassiosira pseudonana
TI:35128 None
 
B7P270_IXOSC
EnsemblMetazoa»
0.0
IscW_ISCW000713 Uncharacterized protein Ixodes scapularis
TI:6945 None
 
D6WB70_TRICA
euHCVdb»
0.0
AUGUSTUS-3.0.2_04570 U7 snRNA-associated Sm-like protein LSm11 Tribolium castaneum
TI:7070 None
 
E9FT20_DAPPU
neXtProt»
0.0
DAPPUDRAFT_220432 Uncharacterized protein Daphnia pulex
TI:6669 None
 
E9QIK5_DANRE
ZFIN»
0.0
lsm11 LSM11, U7 small nuclear RNA-associated
(U7 snRNA-associated Sm-like protein LSm11)		 Danio rerio
TI:7955 None
 
F0ZTS1_DICPU
TubercuList»
0.0
DICPUDRAFT_81530 Sm domain-containing protein Dictyostelium purpureum
TI:5786 None
 
F1MKH0_BOVIN
Ensembl»
0.0
LSM11 U7 snRNA-associated Sm-like protein LSm11 Bos taurus
TI:9913 None
   
F6PG15_ORNAN
Ensembl»
0.0
LSM11 U7 snRNA-associated Sm-like protein LSm11 Ornithorhynchus anatinus
TI:9258 None
   
F6ZR96_CIOIN
Ensembl»
0.0
LOC100185308 U7 snRNA-associated Sm-like protein LSm11 Ciona intestinalis
TI:7719 None
   
F7FGU7_MONDO
Ensembl»
0.0
LSM11 U7 snRNA-associated Sm-like protein LSm11 Monodelphis domestica
TI:13616 None
   
G3S641_GORGO
Ensembl»
0.0
LSM11 U7 snRNA-associated Sm-like protein LSm11 Gorilla gorilla
TI:9593 None
 
H2LT95_ORYLA
Ensembl»
0.0
LSM11 LSM11, U7 small nuclear RNA associated Oryzias latipes
TI:8090 None
   
H2QRW9_PANTR
Ensembl»
0.0
LSM11 U7 snRNA-associated Sm-like protein LSm11 Pan troglodytes
TI:9598 None
 
H9G7B4_ANOCA
Ensembl»
0.0
LSM11 LSM11, U7 small nuclear RNA associated Anolis carolinensis
TI:28377 None
   
LSM11_HUMAN
Ensembl»
6.2
LSM11 U7 snRNA-associated Sm-like protein LSm11 Homo sapiens
TI:9606 None
 
LSM11_MOUSE
Ensembl»
5.3
Lsm11 U7 snRNA-associated Sm-like protein LSm11 Mus musculus
TI:10090 None
 
LSM11_XENLA
CTD»
0.0
lsm11 U7 snRNA-associated Sm-like protein LSm11 Xenopus laevis
TI:8355 None
 
Q9GYQ8_CAEEL
WormBase»
1.0
C49H3.4 CELE_C49H3.4 Sm domain-containing protein Caenorhabditis elegans
TI:6239 None
 
SMDL_DICDI
dictyBase»
2.0
DDB_G0289453 Small nuclear ribonucleoprotein
Sm D-like protein		 Dictyostelium discoideum
TI:44689 None
 
W5MSD8_LEPOC
Ensembl»
0.0
LSM11, U7 small nuclear RNA associated Lepisosteus oculatus
TI:7918 None