Cluster UKP08001
- U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM11
Standard knownness: 5.0; Custom knownness: None; Num. species: 38; Orthology database: Panther19.0; Protein members: 39
Collated Gene Ontology terms
Molecular function: mRNA 3'-end processing by stem-loop binding and cleavage2009, 2010, 2021, 2024 regulation of chromatin organization2021, 2024 positive regulation of G1/S transition of mitotic cell cycle2014, 2024 mRNA processing2024 mRNA splicing, via spliceosome2008, 2017 P-body assembly2017 regulation of alternative mRNA splicing, via spliceosome2006 RNA splicing2024
Cellular component:
U7 snRNP2009, 2017, 2024
nucleus2006, 2009, 2024
histone pre-mRNA 3'end processing complex2009, 2013, 2024
telomerase holoenzyme complex2018, 2024
nucleoplasm2013, 2023, 2024
nuclear body2010, 2023, 2024
ribonucleoprotein complex2024
precatalytic spliceosome2017
catalytic step 2 spliceosome2017
U6 snRNP2023
U4/U6 x U5 tri-snRNP complex2020
P-body2017
Lsm1-7-Pat1 complex2023
small nuclear ribonucleoprotein complex2008
histone locus body2010
cytoplasmic U snRNP body2010
Phylogenetic distribution
| Chordates: | 22/21 |  |
| Echinoderms: | 0/0 | |
| Hemichordates: | 1/1 | |
| Annelids: | 0/1 | |
| Molluscs: | 0/0 | |
| Bryozoans: | 0/0 | |
| Platyhelminthes: | 0/0 | |
| Rotifers: | 0/0 | |
| Nematodes: | 3/3 | |
| Arthropods: | 5/5 | |
| Tardigrades: | 0/0 | |
| Placozoa: | 1/1 | |
| Cnidaria: | 0/1 | |
| Porifera: | 0/0 | |
| Choanoflagellates+: | 0/1 | |
| Dikarya: | 0/14 | |
| Fungi (other): | 0/1 | |
| Protozoa: | 2/3 | |
| Excavates: | 0/4 | |
| Harosa: | 1/4 | |
| Hacrobia: | 0/0 | |
| Plants: | 3/39 | |
| Archea: | 0/8 | |
| Bacteria: | 0/35 |
Click here to switch to the previous version of the database.
Proteins
| UniProt ID Organism DB» |
Standard knownness | clustom knownness | Gene name | Description | Species [Key only] | GO terms | Seq. links | Protein domain links | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
H9G7B4_ANOCA Ensembl» |
|
|
LSM11 | LSM11, U7 small nuclear RNA associated |
Anolis carolinensis TI:28377 None |
|
|
||||||
|
A0A1S4GVL4_ANOGA EnsemblMetazoa» |
|
|
1269847 | Sm domain-containing protein |
Anopheles gambiae TI:7165 None |
|
|
|
|||||
|
F1MKH0_BOVIN Ensembl» |
|
|
LSM11 | LSM11, U7 small nuclear RNA associated |
Bos taurus TI:9913 None |
|
|
||||||
|
A0A9J7NA18_BRAFL CTD» |
|
|
LOC118429778 | U7 snRNA-associated Sm-like protein LSm11 |
Branchiostoma floridae TI:7739 None |
|
|
||||||
|
A8XRH3_CAEBR WormBase» |
|
|
CBG17705 CBG_17705 | Protein CBG17705 |
Caenorhabditis briggsae TI:6238 None |
|
|
|
|||||
|
Q9GYQ8_CAEEL WormBase» |
|
|
C49H3.4 CELE_C49H3.4 | LSM domain-containing protein |
Caenorhabditis elegans TI:6239 None |
|
|
|
|||||
|
A0A8I3RQ11_CANLF Ensembl» |
|
|
LSM11 | LSM11, U7 small nuclear RNA associated |
Canis lupus TI:9612 None |
|
|
||||||
|
A0A2K3CZN5_CHLRE EnsemblPlants» |
|
|
CHLRE_13g571251v5 | Sm domain-containing protein |
Chlamydomonas reinhardtii TI:3055 None |
|
|
|
|||||
|
F6ZR96_CIOIN Ensembl» |
|
|
LOC100185308 | U7 snRNA-associated Sm-like protein LSm11 |
Ciona intestinalis TI:7719 None |
|
|
||||||
|
A0A8M6Z9X5_DANRE CTD» |
|
|
lsm11 | U7 snRNA-associated Sm-like protein LSm11 |
Danio rerio TI:7955 None |
|
|
||||||
|
E9FT20_DAPPU EnsemblMetazoa» |
|
|
DAPPUDRAFT_220432 | Sm domain-containing protein |
Daphnia pulex TI:6669 None |
|
|
|
|||||
|
F0ZTS1_DICPU EnsemblProtists» |
|
|
DICPUDRAFT_81530 | Sm domain-containing protein |
Dictyostelium purpureum TI:5786 None |
|
|
|
|||||
|
SMDL_DICDI dictyBase» |
|
|
DDB_G0289453 | Small nuclear ribonucleoprotein Sm D-like protein |
Dictyostelium discoideum TI:44689 None |
|
|
|
|||||
|
A1Z802_DROME FlyBase» |
|
|
Lsm11 | FI05704p (Lsm11) |
Drosophila melanogaster TI:7227 None |
|
|
|
|||||
|
A0A3Q2I9S9_HORSE Ensembl» |
|
|
LSM11 | LSM11, U7 small nuclear RNA associated |
Equus caballus TI:9796 None |
|
|
||||||
|
M3VWB6_FELCA Ensembl» |
|
|
LSM11 | LSM11, U7 small nuclear RNA associated |
Felis catus TI:9685 None |
|
|
|
|||||
|
A0A8V0YJU4_CHICK Ensembl» |
|
|
LSM11 | LSM11, U7 small nuclear RNA associated |
Gallus gallus TI:9031 None |
|
|
||||||
|
G3S641_GORGO Ensembl» |
|
|
LSM11 | LSM11, U7 small nuclear RNA associated |
Gorilla gorilla TI:9593 None |
|
|
|
|||||
|
LSM11_HUMAN Ensembl» |
|
|
LSM11 | U7 snRNA-associated Sm-like protein LSm11 |
Homo sapiens TI:9606 None |
|
|
|
|||||
|
B7P270_IXOSC EnsemblMetazoa» |
|
|
IscW_ISCW000713 | Uncharacterized protein |
Ixodes scapularis TI:6945 None |
|
|
|
|||||
|
A0A1Y1IID2_KLENI EnsemblPlants» |
|
|
KFL_003870050 | Sm domain-containing protein |
Klebsormidium nitens TI:105231 None |
|
|
|
|||||
|
W5MSD8_LEPOC Ensembl» |
|
|
LSM11, U7 small nuclear RNA associated |
Lepisosteus oculatus TI:7918 None |
|
|
|
||||||
|
A0A5F8AMJ5_MACMU Ensembl» |
|
|
LSM11 | LSM11, U7 small nuclear RNA associated |
Macaca mulatta TI:9544 None |
|
|
||||||
|
F7FGU7_MONDO Ensembl» |
|
|
LSM11 | LSM11, U7 small nuclear RNA associated |
Monodelphis domestica TI:13616 None |
|
|
||||||
|
LSM11_MOUSE Ensembl» |
|
|
Lsm11 | U7 snRNA-associated Sm-like protein LSm11 |
Mus musculus TI:10090 None |
|
|
|
|||||
|
F6PG15_ORNAN Ensembl» |
|
|
LSM11 | LSM11, U7 small nuclear RNA associated |
Ornithorhynchus anatinus TI:9258 None |
|
|
||||||
|
H2LT95_ORYLA Ensembl» |
|
|
lsm11 | LSM11, U7 small nuclear RNA associated |
Oryzias latipes TI:8090 None |
|
|
||||||
|
H2QRW9_PANTR Ensembl» |
|
|
LSM11 | LSM11, U7 small nuclear RNA associated |
Pan troglodytes TI:9598 None |
|
|
|
|||||
|
A0A2K1IRM3_PHYPA EnsemblPlants» |
|
|
PHYPA_026057 | Sm domain-containing protein |
Physcomitrium patens TI:3218 None |
|
|
|
|||||
|
A0A2A6BYD0_PRIPA EnsemblMetazoa» |
|
|
WBGene00277078 | Sm domain-containing protein |
Pristionchus pacificus TI:54126 None |
|
|
|
|||||
|
A6HDQ3_RAT RGD» |
|
|
Lsm11 | LSM11, U7 small nuclear RNA associated (Lsm11 protein) |
Rattus norvegicus TI:10116 None |
|
|
|
|||||
|
A0A7M7GJ12_STRPU EnsemblMetazoa» |
|
|
LSM domain-containing protein |
Strongylocentrotus purpuratus TI:7668 None |
|
|
|||||||
|
A0A7M7NLG9_STRPU EnsemblMetazoa» |
|
|
LSM domain-containing protein |
Strongylocentrotus purpuratus TI:7668 None |
|
|
|||||||
|
A0A287A3H2_PIG Ensembl» |
|
|
LSM11 | LSM11, U7 small nuclear RNA associated |
Sus scrofa TI:9823 None |
|
|
||||||
|
B5YLR2_THAPS EnsemblProtists» |
|
|
THAPS_10869 | Sm domain-containing protein |
Thalassiosira pseudonana TI:35128 None |
|
|
|
|||||
|
D6WB70_TRICA EnsemblMetazoa» |
|
|
AUGUSTUS-3.0.2_04570 | U7 snRNA-associated Sm-like protein LSm11 |
Tribolium castaneum TI:7070 None |
|
|
|
|||||
|
B3RMX7_TRIAD EnsemblMetazoa» |
|
|
TRIADDRAFT_52963 | LSM domain-containing protein |
Trichoplax adhaerens TI:10228 None |
|
|
|
|||||
|
A0A6I8PWH2_XENTR Ensembl» |
|
|
lsm11 | LSM11, U7 small nuclear RNA associated (U7 snRNA-associated Sm-like protein LSm11 isoform X1) |
Xenopus tropicalis TI:8364 None |
|
|
||||||
|
LSM11_XENLA CTD» |
|
|
lsm11 | U7 snRNA-associated Sm-like protein LSm11 |
Xenopus laevis TI:8355 None |
|
|
|
|||||
