Collated Gene Ontology terms

Biological process: myosin II head/neck binding(2018, 2019, 2025) metal ion binding(2025) actin binding(2025) histone acetyltransferase activity(2022) protein domain specific binding(2011) DNA-binding transcription factor activity(2025) DNA binding(2025)

Molecular function: regulation of focal adhesion assembly2018, 2019, 2025 positive regulation of stress fiber assembly2017, 2018, 2019, 2025 regulation of primary metabolic process2025 positive regulation of macromolecule metabolic process2025 actomyosin structure organization2025 positive regulation of protein phosphorylation2018, 2025 negative regulation of cell migration2017, 2018, 2025 cytoplasmic actin-based contraction involved in cell motility2017, 2025 chromatin remodeling2025 regulation of DNA-templated transcription2025

Cellular component: stress fiber2018, 2019, 2025 actin cytoskeleton2024, 2025 myosin II complex2018, 2025 M band2007

Phylogenetic distribution

Chordates: 21/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 2/3 
Arthropods: 3/5 
Tardigrades: 0/0 
Placozoa: 0/1 
Cnidaria: 0/1 
Porifera: 0/0 
Choanoflagellates+: 1/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 1/3 
Excavates: 0/4 
Harosa: 0/4 
Hacrobia: 0/0 
Plants: 1/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2015 2016 2017 2018 2019 2020 2021 2022 2023 2024 2025 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
LIMC1_HUMAN
Ensembl»
7.1
LIMCH1 LIM and calponin
homology domains-containing protein 1		 Homo sapiens
TI:9606 None
 
LIMC1_MOUSE
Ensembl»
7.0
Limch1 LIM and calponin
homology domains-containing protein 1		 Mus musculus
TI:10090 None
 
A0A8I5XVC5_RAT
RGD»
3.0
Limch1 LIM and calponin homology domains 1 Rattus norvegicus
TI:10116 None
   
Q8MNT0_CAEEL
WormBase»
2.3
lim-8 PDZ domain-containing protein Caenorhabditis elegans
TI:6239 None
 
Q55E66_DICDI
dictyBase»
0.5
DDB_G0269374 Uncharacterized protein Dictyostelium discoideum
TI:44689 None
 
A0A1D5QBM7_MACMU
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Macaca mulatta
TI:9544 None
   
A0A1L8HTL4_XENLA
Xenbase»
0.0
limch1.L LIM and calponin homology
domains-containing protein 1 isoform X1		 Xenopus laevis
TI:8355 None
   
A0A287AMS3_PIG
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Sus scrofa
TI:9823 None
   
A0A2I2Y3Z8_GORGO
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Gorilla gorilla
TI:9593 None
 
A0A2I3RCQ8_PANTR
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Pan troglodytes
TI:9598 None
 
A0A2K3CNW3_CHLRE
neXtProt»
0.0
CHLRE_17g700500v5 BRCT domain-containing protein Chlamydomonas reinhardtii
TI:3055 None 		 
 
A0A2K3CRG5_CHLRE
euHCVdb»
0.0
CHLRE_17g736950v5 Mediator of RNA polymerase II transcription subunit
25 von Willebrand factor type A domain-containing protein		 Chlamydomonas reinhardtii
TI:3055 None 		 
 
A0A2K3DZ78_CHLRE
euHCVdb»
0.0
CHLRE_03g203300v5 Uncharacterized protein Chlamydomonas reinhardtii
TI:3055 None 		 
   
A0A3Q2GZ75_HORSE
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Equus caballus
TI:9796 None
   
A0A5F8H435_MONDO
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Monodelphis domestica
TI:13616 None
   
A0A6I8PAV9_ORNAN
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Ornithorhynchus anatinus
TI:9258 None
   
A0A7M7LT05_STRPU
EnsemblMetazoa»
0.0
Trichohyalin-like Strongylocentrotus purpuratus
TI:7668 None
   
A0A803TGV0_ANOCA
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Anolis carolinensis
TI:28377 None
   
A0A8I3NTC9_CANLF
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Canis lupus
TI:9612 None
   
A0A8J0R0V7_XENTR
Xenbase»
0.0
limch1 LIM and calponin homology
domains-containing protein 1 isoform X1		 Xenopus tropicalis
TI:8364 None
   
A0A8J0U7W4_XENLA
Xenbase»
0.0
limch1.S LIM and calponin homology
domains-containing protein 1-like isoform X1		 Xenopus laevis
TI:8355 None
   
A0A8M3B082_DANRE
ZFIN»
0.0
limch1b LIM and calponin homology
domains-containing protein 1 isoform X1		 Danio rerio
TI:7955 None
   
A0A8V0YUD9_CHICK
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Gallus gallus
TI:9031 None
   
A0A9J7LEB9_BRAFL
euHCVdb»
0.0
LOC118419103 LIM and calponin homology
domains-containing protein 1-like isoform X1		 Branchiostoma floridae
TI:7739 None
   
A0AB32TKX9_DANRE
ZFIN»
0.0
limch1a LIM and calponin homology
domains-containing protein 1a isoform X1		 Danio rerio
TI:7955 None
   
A0ABI0P361_BOVIN
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Bos taurus
TI:9913 None
   
A0ABI7ZIM3_FELCA
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Felis catus
TI:9685 None
   
A8XPG8_CAEBR
WormBase»
0.0
lim-8 Protein CBR-LIM-8 Caenorhabditis briggsae
TI:6238 None
 
D6W7G1_TRICA
euHCVdb»
0.0
AUGUSTUS-3.0.2_05164 LIM zinc-binding domain-containing protein Tribolium castaneum
TI:7070 None
 
E9H9M9_DAPPU
neXtProt»
0.0
DAPPUDRAFT_8259 LIM zinc-binding domain-containing protein Daphnia pulex
TI:6669 None
 
F5HMP2_ANOGA
EnsemblMetazoa»
0.0
1281694 AGAP001480-PB (AGAP001480-PC) (AGAP001480-PD) Anopheles gambiae
TI:7165 None
 
H2LUP1_ORYLA
Ensembl»
0.0
LOC101155575 LIM and calponin homology domains 1a Oryzias latipes
TI:8090 None
   
H2N0H1_ORYLA
Ensembl»
0.0
LIMCH1 LIM and calponin homology domains 1 Oryzias latipes
TI:8090 None
   
LIMC1_XENLA
Xenbase»
0.0
limch1 LIM and calponin
homology domains-containing protein 1		 Xenopus laevis
TI:8355 None
 
Q54T90_DICDI
dictyBase»
0.0
DDB_G0281919 BRCT domain-containing protein Dictyostelium discoideum
TI:44689 None 		 
   
Q551S2_DICDI
dictyBase»
0.0
DDB_G0276389 Cilium assembly protein
DZIP1 N-terminal domain-containing protein		 Dictyostelium discoideum
TI:44689 None 		 
 
Q6C1W6_YARLI
TubercuList»
0.0
YALI0_F12837g YALI0F12837p Yarrowia lipolytica
TI:4952 None 		 
   
T1EY24_HELRO
EnsemblMetazoa»
0.0
20201474 Uncharacterized protein Helobdella robusta
TI:6412 None
   
T1F335_HELRO
EnsemblMetazoa»
0.0
20203234 Ig-like domain-containing protein Helobdella robusta
TI:6412 None
   
W5N5K7_LEPOC
Ensembl»
0.0
LIM and calponin homology domains 1 Lepisosteus oculatus
TI:7918 None