Collated Gene Ontology terms

Biological process: RNA binding(2024) translation initiation factor activity(2024) mRNA binding(2018) acyltransferase activity(2024)

Molecular function: mRNA export from nucleus2009, 2013, 2017, 2024 RNA-mediated gene silencing2010, 2024 ta-siRNA processing2010, 2024 mRNA transport2024 mRNA processing2024 RNA splicing2024 translation2021, 2024 translational initiation2024 transcription elongation by RNA polymerase II2020 poly(A)+ mRNA export from nucleus2023
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021 intraciliary transport involved in cilium assembly2024

Cellular component: THO complex part of transcription export complex2013, 2017, 2024 THO complex2013, 2014, 2024 transcription export complex2009, 2016, 2018, 2020, 2024 nucleus2024 chromosome, telomeric region2016, 2024 nuclear speck2024 organelle2024 nucleoplasm2015 membrane2024 ciliary tip2024
ciliary pocket collar2024 ciliary basal body2024 Cul4-RING E3 ubiquitin ligase complex2008 9+2 motile cilium2024

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 14/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 1/4 
Harosa: 3/4 
Hacrobia: 0/0 
Plants: 36/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
A0A022QYR7_ERYGU
EnsemblFungi»
0.0
MIMGU_mgv1a0114402mg Translation initiation factor
beta propellor-like domain-containing protein		 Erythranthe guttata
TI:4155 None
 
A0A061FBI7_THECC
EnsemblPlants»
0.0
TCM_030526 Transducin/WD40 repeat-like superfamily protein Theobroma cacao
TI:3641 None
 
A0A067G327_CITSI
Ensembl»
0.0
CISIN_1g0213191mg Uncharacterized protein Citrus sinensis
TI:2711 None
 
A0A067GEV5_CITSI
Ensembl»
0.0
CISIN_1g0213192mg Uncharacterized protein Citrus sinensis
TI:2711 None
 
A0A078FW55_BRANA
EnsemblPlants»
0.0
BnaA10g10280D BnaA10g10280D protein Brassica napus
TI:3708 None
 
A0A078J1Z0_BRANA
EnsemblPlants»
0.0
BnaCnng32010D BnaCnng32010D protein Brassica napus
TI:3708 None
 
A0A0A0L651_CUCSA
EnsemblPlants»
0.0
Csa_3G061010 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Cucumis sativus
TI:3659 None
 
A0A0K9NR11_ZOSMR
EnsemblPlants»
0.0
ZOSMA_6G01360 Putative WD-repeat protein Zostera marina
TI:29655 None
 
A0A0U9HJH8_KLENI
EnsemblPlants»
0.0
KFL_001130110 WD40 repeat protein Klebsormidium nitens
TI:105231 None
 
A0A1D5QGW8_MACMU
Ensembl»
0.0
THOC3 THO complex 3 (THO complex subunit 3) Macaca mulatta
TI:9544 None
 
A0A1D5YIR8_WHEAT
EnsemblPlants»
0.0
CFC21_065550 CFC21_071287 CFC21_077268 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Triticum aestivum
TI:4565 None
 
A0A1L8GXT0_XENLA
Xenbase»
0.0
thoc3.L THO complex subunit 3 Xenopus laevis
TI:8355 None
   
A0A1S3WXS2_TOBAC
EnsemblFungi»
0.0
LOC107759125 THO complex subunit 3 Nicotiana tabacum
TI:4097 None
   
A0A1S3Z9Z1_TOBAC
EnsemblFungi»
0.0
LOC107784599 THO complex subunit 3-like Nicotiana tabacum
TI:4097 None
   
A0A1U7ZC15_NELNU
EnsemblBacteria»
0.0
LOC104588549 THO complex subunit 3 Nelumbo nucifera
TI:4432 None
 
A0A1U8J8G0_GOSHI
Ensembl»
0.0
LOC107903400 THO complex subunit 3-like Gossypium hirsutum
TI:3635 None
   
A0A1U8LV82_GOSHI
Ensembl»
0.0
LOC107931189 THO complex subunit 3 Gossypium hirsutum
TI:3635 None
   
A0A251UAL6_HELAN
EnsemblPlants»
0.0
TEX1 Putative transducin/WD40 repeat-like superfamily
protein (Transcription factor WD40-like family)		 Helianthus annuus
TI:4232 None
 
A0A2C9VZQ5_MANES
EnsemblPlants»
0.0
MANES_04G054100 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Manihot esculenta
TI:3983 None
 
A0A2I2Y4U7_GORGO
Ensembl»
0.0
Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Gorilla gorilla
TI:9593 None
 
A0A2I4E3E0_JUGRE
EnsemblPlants»
0.0
LOC108985900 THO complex subunit 3 Juglans regia
TI:51240 None
 
A0A2R6WY31_MARPO
EnsemblPlants»
0.0
MARPO_0049s0058 Uncharacterized protein Marchantia polymorpha
TI:3197 None
 
A0A337SC67_FELCA
Ensembl»
0.0
Uncharacterized protein Felis catus
TI:9685 None 		 
 
A0A3B3IEH8_ORYLA
Ensembl»
0.0
thoc3 THO complex 3 Oryzias latipes
TI:8090 None
   
A0A3Q7HIN8_SOLLC
EnsemblPlants»
0.0
101265940 Uncharacterized protein Solanum lycopersicum
TI:4081 None
   
A0A5F8GTI7_MONDO
Ensembl»
0.0
Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Monodelphis domestica
TI:13616 None
   
A0A6I8PA65_ORNAN
Ensembl»
0.0
THOC3 THO complex 3 Ornithorhynchus anatinus
TI:9258 None
   
A0A7M7HCD5_STRPU
EnsemblMetazoa»
0.0
THO complex subunit 3 Strongylocentrotus purpuratus
TI:7668 None
   
A0A803T4W5_ANOCA
Ensembl»
0.0
Anaphase-promoting complex subunit
4 WD40 domain-containing protein		 Anolis carolinensis
TI:28377 None
   
A0A804JSS2_MUSAM
EnsemblPlants»
0.0
103990486 (wild Malaysian banana) hypothetical protein Musa acuminata
TI:4641 None
 
A0A804Q9Y0_MAIZE
EnsemblPlants»
0.0
THO complex subunit 3 Zea mays
TI:4577 None
   
A0A8I3NMM3_CANLF
Ensembl»
0.0
THOC3 THO complex 3 Canis lupus
TI:9612 None
   
A0A8I6Y0I8_HORVV
EnsemblPlants»
0.0
Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Hordeum vulgare
TI:4513 None
   
A0A8J0R2M6_XENTR
Xenbase»
0.0
thoc3 THO complex subunit 3 Xenopus tropicalis
TI:8364 None
   
A0A8R1Z991_PRIPA
EnsemblMetazoa»
0.0
WBGene00304852 WD40 domain-containing protein Pristionchus pacificus
TI:54126 None
   
A0A8V0YNZ7_CHICK
Ensembl»
0.0
THOC3 THO complex 3 Gallus gallus
TI:9031 None
   
A0C5M6_PARTE
EnsemblProtists»
0.0
GSPATT00035222001 Chromosome undetermined scaffold_150,
whole genome shotgun sequence		 Paramecium tetraurelia
TI:5888 None
 
A0CAW6_PARTE
EnsemblProtists»
0.0
GSPATT00036714001 Chromosome undetermined scaffold_162,
whole genome shotgun sequence		 Paramecium tetraurelia
TI:5888 None
 
A0DI78_PARTE
EnsemblProtists»
0.0
GSPATT00017116001 Chromosome undetermined scaffold_51,
whole genome shotgun sequence		 Paramecium tetraurelia
TI:5888 None
 
A0DPA6_PARTE
EnsemblProtists»
0.0
GSPATT00019055001 Chromosome undetermined scaffold_59,
whole genome shotgun sequence		 Paramecium tetraurelia
TI:5888 None
 
A2FU98_TRIV3
VEuPathDB»
0.0
TVAG_472710 Uncharacterized protein Trichomonas vaginalis
TI:5722 None
 
A5ADM7_VITVI
EnsemblPlants»
0.0
VIT_19s0015g01220 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Vitis vinifera
TI:29760 None
 
A6KB01_RAT
RGD»
1.0
Thoc3 THO complex 3 Rattus norvegicus
TI:10116 None
 
A7EN57_SCLS1
VEuPathDB»
0.0
SS1G_06756 Uncharacterized protein Sclerotinia sclerotiorum
TI:5180 None
 
A7SNF3_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g172456 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Nematostella vectensis
TI:45351 None
 
A8JHR3_CHLRE
EnsemblPlants»
0.0
CHLRE_12g559850v5 Uncharacterized protein Chlamydomonas reinhardtii
TI:3055 None
 
A8XFC9_CAEBR
WormBase»
0.0
thoc-3 Protein CBR-THOC-3.1 Caenorhabditis briggsae
TI:6238 None
 
A9P9W4_POPTR
EnsemblPlants»
0.0
POPTR_001G470900 Uncharacterized protein Populus trichocarpa
TI:3694 None
 
A9TTX0_PHYPA
EnsemblPlants»
0.0
PHYPA_019510 Anaphase-promoting complex subunit
4 WD40 domain-containing protein		 Physcomitrium patens
TI:3218 None
 
A9UT92_MONBE
EnsemblProtists»
0.0
MONBRDRAFT_23390 Anaphase-promoting complex subunit
4 WD40 domain-containing protein		 Monosiga brevicollis
TI:81824 None
 
AAC3_DICDI
dictyBase»
0.5
AAC3 WD repeat-containing protein AAC3
(AAC-rich mRNA clone AAC3 protein)		 Dictyostelium discoideum
TI:44689 None
 
B3RNZ7_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_20906 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Trichoplax adhaerens
TI:10228 None
 
B6K6F5_SCHJY
EnsemblFungi»
0.0
SJAG_05328 TRE Xcomplex subunit Tex1 Schizosaccharomyces japonicus
TI:4897 None
 
B7QI45_IXOSC
EnsemblMetazoa»
0.0
8041598 WD repeat-containing protein 55 homolog Ixodes scapularis
TI:6945 None
 
B8BTR0_THAPS
EnsemblProtists»
0.0
THAPSDRAFT_2222 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Thalassiosira pseudonana
TI:35128 None
 
B9SUL6_RICCO
EnsemblBacteria»
0.0
RCOM_0998840 WD-repeat protein, putative Ricinus communis
TI:3988 None
 
C3Y441_BRAFL
CTD»
0.0
LOC118414108 THO complex subunit 3-like Branchiostoma floridae
TI:7739 None
 
C5X8Y2_SORBI
EnsemblPlants»
0.0
SORBI_3002G160700 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Sorghum bicolor
TI:4558 None
 
D6WIR9_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_00095 F-box-like/WD repeat-containing protein ebi Tribolium castaneum
TI:7070 None
 
D8SHI3_SELML
EnsemblPlants»
0.0
SELMODRAFT_179772 Uncharacterized protein Selaginella moellendorffii
TI:88036 None
 
D8T5S8_SELML
EnsemblPlants»
0.0
SELMODRAFT_185709 Uncharacterized protein Selaginella moellendorffii
TI:88036 None
 
E3KCI8_PUCGT
EnsemblFungi»
0.0
PGTG_08185 Uncharacterized protein Puccinia graminis
TI:5297 None
 
E9H241_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_307424 Translation initiation factor
beta propellor-like domain-containing protein		 Daphnia pulex
TI:6669 None
 
F0ZU75_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_38307 Uncharacterized protein Dictyostelium purpureum
TI:5786 None
 
F1A2T3_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_51243 Uncharacterized protein Dictyostelium purpureum
TI:5786 None
 
F1A669_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_85585 Uncharacterized protein Dictyostelium purpureum
TI:5786 None 		 
 
F1S386_PIG
Ensembl»
0.0
THOC3 THO complex 3 (THO complex subunit 3) Sus scrofa
TI:9823 None
 
F4P959_BATDJ
EnsemblBacteria»
0.0
BATDEDRAFT_90779 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Batrachochytrium dendrobatidis
TI:109871 None
 
F6ZML6_CIOIN
Ensembl»
0.0
Uncharacterized protein Ciona intestinalis
TI:7719 None
 
F7BAN6_HORSE
Ensembl»
0.0
THOC3 THO complex subunit 3 Equus caballus
TI:9796 None
   
F7CHT4_MONDO
Ensembl»
0.0
THOC3 THO complex 3 Monodelphis domestica
TI:13616 None
   
G3R8W2_GORGO
Ensembl»
0.0
Uncharacterized protein Gorilla gorilla
TI:9593 None
 
G7IY98_MEDTR
EnsemblPlants»
0.0
11438034 Putative transcription factor
WD40-like family (Transducin/WD-like repeat-protein)		 Medicago truncatula
TI:3880 None
 
H2R3N4_PANTR
Ensembl»
0.0
THOC3 THO complex 3 Pan troglodytes
TI:9598 None
 
H3GCK6_PHYRM
EnsemblProtists»
0.0
Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Phytophthora ramorum
TI:164328 None
 
H8WGY8_CAEBR
WormBase»
0.0
Cbr-thoc-3.2 Protein CBR-THOC-3.2 Caenorhabditis briggsae
TI:6238 None
 
I1IP80_BRADI
EnsemblPlants»
0.0
100838230 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Brachypodium distachyon
TI:15368 None
 
I1KYS6_SOYBN
EnsemblPlants»
0.0
100782507 Uncharacterized protein Glycine max
TI:3847 None
 
I1N056_SOYBN
EnsemblPlants»
0.0
100812126 Uncharacterized protein Glycine max
TI:3847 None
 
K3ZV23_SETIT
EnsemblPlants»
0.0
101755743 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Setaria italica
TI:4555 None
 
M1C059_SOLTU
EnsemblPlants»
0.0
102597071 Transducin family protein Solanum tuberosum
TI:4113 None
   
M4CF63_BRACM
EnsemblPlants»
0.0
BRARA_J01048 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Brassica campestris
TI:3711 None
 
M5VXG7_PRUPE
EnsemblPlants»
0.0
PRUPE_6G035000 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Prunus persica
TI:3760 None
 
M5W083_PRUPE
EnsemblPlants»
0.0
PRUPE_6G033200 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Prunus persica
TI:3760 None
 
P91867_CAEEL
WormBase»
0.5
thoc-3 WD_REPEATS_REGION domain-containing protein Caenorhabditis elegans
TI:6239 None
 
Q4WQB0_ASPFU
EnsemblFungi»
0.0
AFUA_4G12190 WD repeat-containing protein Aspergillus fumigatus
TI:746128 None
 
Q54XM5_DICDI
dictyBase»
0.5
DDB_G0278851 WD40 repeat-containing protein Dictyostelium discoideum
TI:44689 None
 
Q59X91_CANAL
EnsemblFungi»
0.0
CAALFM_C500840WA orf19.8219 Uncharacterized protein Candida albicans
TI:5476 None
 
Q5B729_EMENI
EnsemblFungi»
0.0
ANIA_03651 WD repeat-containing
protein (AFU_orthologue AFUA_4G12190)		 Emericella nidulans
TI:162425 None
 
Q5KJ91_CRYNJ
EnsemblFungi»
0.0
CND00190 Anaphase-promoting complex subunit
4 WD40 domain-containing protein		 Cryptococcus neoformans
TI:5207 None
 
Q69VQ7_ORYSJ
EnsemblPlants»
0.0
Os09g0298400 Os09g0298400 protein Oryza sativa
TI:4530 None
 
Q6AXK9_DANRE
ZFIN»
0.5
zgc:100815 THO complex 3 (THO complex subunit 3) Danio rerio
TI:7955 None
 
Q6C4P2_YARLI
EnsemblFungi»
0.0
YALI0_E24827g YALI0E24827p Yarrowia lipolytica
TI:4952 None
 
Q752E2_ASHGO
EnsemblFungi»
0.0
AGOS_AFR634W AFR634Wp Ashbya gossypii
TI:33169 None
 
Q7PTI6_ANOGA
EnsemblMetazoa»
0.0
1269478 AGAP003891-PA Anopheles gambiae
TI:7165 None
 
Q7SCY1_NEUCR
EnsemblFungi»
0.0
NCU02753 WD repeat-containing protein Neurospora crassa
TI:5141 None
 
Q9VHT2_DROME
FlyBase»
0.5
tex FI07663p (Tex) (Tex protein) Drosophila melanogaster
TI:7227 None
 
T1FNS0_HELRO
EnsemblMetazoa»
0.0
20210467 Uncharacterized protein Helobdella robusta
TI:6412 None
 
TEX1_YEAST
SGD»
3.2
TEX1 Protein TEX1 (Trex component 1) Saccharomyces cerevisiae
TI:4932 None
 
THOC3_ARATH
TAIR»
1.6
THO3 THO complex subunit 3 (TEX1 homolog) (AtTEX1) Arabidopsis thaliana
TI:3702 None
 
THOC3_BOVIN
Ensembl»
0.0
THOC3 THO complex subunit 3 (Tho3) Bos taurus
TI:9913 None
 
THOC3_HUMAN
Ensembl»
1.3
THOC3 THO complex subunit 3
(Tho3) (TEX1 homolog) (hTREX45)		 Homo sapiens
TI:9606 None
 
THOC3_MOUSE
Ensembl»
0.0
Thoc3 THO complex subunit 3 (Tho3) Mus musculus
TI:10090 None
 
U5D9B9_AMBTC
EnsemblPlants»
0.0
AMTR_s00061p00102140 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Amborella trichopoda
TI:13333 None
 
W5N0W1_LEPOC
Ensembl»
0.0
THO complex 3 Lepisosteus oculatus
TI:7918 None
 
YJKA_SCHPO
PomBase»
1.5
SPCC18B5.10c Uncharacterized WD
repeat-containing protein C18B5.10c		 Schizosaccharomyces pombe
TI:4896 None