Collated Gene Ontology terms

Biological process: RNA binding(2006, 2007, 2014, 2024)

Molecular function: mRNA 3'-end processing2024 mRNA processing2024 transmembrane transport2024 intraciliary transport involved in cilium assembly2024 RNA processing2007

Cellular component: mRNA cleavage stimulating factor complex2007, 2017, 2018, 2024 nucleus2017, 2024 nucleoplasm2010, 2013, 2017, 2023, 2024 ribosome2024 membrane2024 ciliary tip2024 ciliary pocket collar2024 ciliary basal body2024 9+2 motile cilium2024

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 3/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 2/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 3/4 
Harosa: 1/4 
Hacrobia: 0/0 
Plants: 33/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
G2HEA5_PANTR
Ensembl»
0.0
CSTF1 Cleavage stimulation factor 50 kDa subunit Pan troglodytes
TI:9598 None
 
CSTF1_HUMAN
Ensembl»
0.5
CSTF1 Cleavage stimulation factor subunit 1 (CF-1 50 kDa subunit) (Cleavage
stimulation factor 50 kDa subunit) (CSTF 50 kDa subunit) (CstF-50)		 Homo sapiens
TI:9606 None
 
CTF50_ARATH
TAIR»
0.0
CSTF50 Cleavage stimulation factor subunit 50 (AtCstF-50) (AtCstF50) (CF-1 50 kDa
subunit) (Cleavage stimulation factor 50 kDa subunit) (CSTF 50 kDa subunit)		 Arabidopsis thaliana
TI:3702 None
 
A5GFW3_PIG
Ensembl»
0.0
CSTF1 Cleavage stimulation factor 50 kDa subunit Sus scrofa
TI:9823 None
 
CSTF1_MOUSE
Ensembl»
0.0
Cstf1 Cleavage stimulation factor subunit 1 (CF-1 50 kDa subunit) (Cleavage
stimulation factor 50 kDa subunit) (CSTF 50 kDa subunit) (CstF-50)		 Mus musculus
TI:10090 None
 
G7N4H3_MACMU
Ensembl»
0.0
CSTF1 Cleavage stimulation factor 50 kDa subunit Macaca mulatta
TI:9544 None
 
B4FBI9_MAIZE
EnsemblPlants»
0.0
100192488 Cleavage stimulation factor 50 kDa subunit Zea mays
TI:4577 None
 
Q9FNU4_ORYSJ
EnsemblPlants»
0.0
LOC_Os03g54770 Os03g0754900 Cleavage stimulation factor 50 kDa subunit Oryza sativa
TI:4530 None
 
A0A078J444_BRANA
EnsemblPlants»
0.0
BnaC07g49820D Cleavage stimulation factor 50 kDa subunit Brassica napus
TI:3708 None
 
A0A251UUP1_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr05g0154271 HanXRQr2_Chr05g0232341 Cleavage stimulation factor 50 kDa subunit Helianthus annuus
TI:4232 None
 
A8BFV5_GIAIC
EnsemblProtists»
0.0
GL50803_0015042 GL50803_15042 Cleavage stimulation factor 50 kDa subunit Giardia intestinalis
TI:5741 None
 
G7IGS9_MEDTR
EnsemblPlants»
0.0
11419557 Cleavage stimulation factor 50 kDa subunit Medicago truncatula
TI:3880 None
 
G7KPH7_MEDTR
EnsemblPlants»
0.0
11437498 Cleavage stimulation factor, 50 kDa subunit,
putative (Putative transcription factor WD40-like family)		 Medicago truncatula
TI:3880 None
 
Q6NVS0_XENTR
Xenbase»
0.0
cstf1 Cleavage stimulation factor 50 kDa subunit Xenopus tropicalis
TI:8364 None
 
Q8LKU8_SORBI
EnsemblPlants»
0.0
170F8.2 Cleavage stimulation factor 50 kDa subunit Sorghum bicolor
TI:4558 None
 
Q9V9V0_DROME
FlyBase»
0.0
CstF50 WD repeat-containing protein 55 homolog
(Cleavage stimulation factor 50 kDa subunit)		 Drosophila melanogaster
TI:7227 None
 
T1G449_HELRO
EnsemblMetazoa»
0.0
20215847 Cleavage stimulation factor 50 kDa subunit Helobdella robusta
TI:6412 None
 
W5M6N5_LEPOC
Ensembl»
0.0
Cleavage stimulation factor 50 kDa subunit Lepisosteus oculatus
TI:7918 None
 
A0A061FX69_THECC
EnsemblPlants»
0.0
TCM_014303 Cleavage stimulation factor 50 kDa subunit Theobroma cacao
TI:3641 None
 
A0A061GCR6_THECC
EnsemblPlants»
0.0
TCM_016337 Cleavage stimulation factor 50 kDa subunit Theobroma cacao
TI:3641 None
 
A0A067FE98_CITSI
Ensembl»
0.0
CISIN_1g040370mg Cleavage stimulation factor 50 kDa subunit Citrus sinensis
TI:2711 None
 
A0A072VIS3_MEDTR
EnsemblPlants»
0.0
MTR_2g060475 Cleavage stimulation factor 50 kDa subunit Medicago truncatula
TI:3880 None
 
A0A0A0LVN0_CUCSA
EnsemblPlants»
0.0
Csa_1G039850 Cleavage stimulation factor 50 kDa subunit Cucumis sativus
TI:3659 None
 
A0A0K9PQ69_ZOSMR
EnsemblPlants»
0.0
ZOSMA_1G03780 Cleavage stimulation factor 50 kDa subunit Zostera marina
TI:29655 None
 
A0A0R0KK04_SOYBN
EnsemblPlants»
0.0
GLYMA_04G160300 Cleavage stimulation factor 50 kDa subunit Glycine max
TI:3847 None
 
A0A251PBH1_PRUPE
EnsemblPlants»
0.0
PRUPE_5G207700 Cleavage stimulation factor 50 kDa subunit Prunus persica
TI:3760 None
 
A0A2C9UL23_MANES
EnsemblPlants»
0.0
MANES_14G087700 Cleavage stimulation factor 50 kDa subunit Manihot esculenta
TI:3983 None
 
A0A2G2Y8A5_CAPAN
EnsemblPlants»
0.0
T459_30395 Uncharacterized protein Capsicum annuum
TI:4072 None
 
A0A2I4F9A0_JUGRE
EnsemblPlants»
0.0
LOC108996656 Cleavage stimulation factor 50 kDa subunit Juglans regia
TI:51240 None
 
A0A2I4F9A5_JUGRE
EnsemblPlants»
0.0
LOC108996656 Cleavage stimulation factor 50 kDa subunit Juglans regia
TI:51240 None
 
A0A2R6WAK7_MARPO
EnsemblPlants»
0.0
MARPO_0118s0024 Cleavage stimulation factor 50 kDa subunit Marchantia polymorpha
TI:3197 None
 
A0A3B6KQ94_WHEAT
EnsemblPlants»
0.0
CFC21_067709 Cleavage stimulation factor 50 kDa subunit Triticum aestivum
TI:4565 None
 
A0JN63_BOVIN
Ensembl»
0.0
CSTF1 Cleavage stimulation factor 50 kDa subunit Bos taurus
TI:9913 None
 
A7SVS3_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g174858 Cleavage stimulation factor 50 kDa subunit Nematostella vectensis
TI:45351 None
 
A8WNM2_CAEBR
WormBase»
0.0
cpf-1 Cleavage stimulation factor 50 kDa subunit Caenorhabditis briggsae
TI:6238 None
 
A9RMF9_PHYPA
EnsemblPlants»
0.0
PHYPA_022705 Cleavage stimulation factor 50 kDa subunit Physcomitrium patens
TI:3218 None
 
A9VA75_MONBE
EnsemblProtists»
0.0
MONBRDRAFT_34204 Cleavage stimulation factor 50 kDa subunit Monosiga brevicollis
TI:81824 None
 
B3RZT4_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_26681 Cleavage stimulation factor 50 kDa subunit Trichoplax adhaerens
TI:10228 None
 
B9RLL1_RICCO
EnsemblBacteria»
0.0
RCOM_1468950 Cleavage stimulation factor 50 kDa subunit Ricinus communis
TI:3988 None
 
C3ZY33_BRAFL
CTD»
0.0
LOC118430819 Cleavage stimulation factor 50 kDa subunit Branchiostoma floridae
TI:7739 None
 
C6KT45_PLAF7
EnsemblProtists»
0.0
PF3D7_0620500 Cleavage stimulation factor 50 kDa subunit Plasmodium falciparum
TI:5833 None
 
CSTF1_RAT
RGD»
0.0
Cstf1 Cleavage stimulation factor subunit 1 (Cleavage stimulation factor
50 kDa subunit) (CSTF 50 kDa subunit) (CstF-50)		 Rattus norvegicus
TI:10116 None
 
D7SIL8_VITVI
EnsemblPlants»
0.0
VIT_17s0000g05080 Cleavage stimulation factor 50 kDa subunit Vitis vinifera
TI:29760 None
 
D8QXZ6_SELML
EnsemblPlants»
0.0
SELMODRAFT_141637 Cleavage stimulation factor 50 kDa subunit Selaginella moellendorffii
TI:88036 None
 
E9G5N6_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_300374 Cleavage stimulation factor 50 kDa subunit Daphnia pulex
TI:6669 None
 
F0ZZM4_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_89999 Cleavage stimulation factor 50 kDa subunit Dictyostelium purpureum
TI:5786 None
 
F1QFK9_DANRE
ZFIN»
0.0
fc22d10 Cleavage stimulation factor 50 kDa subunit Danio rerio
TI:7955 None
 
F4P2W0_BATDJ
EnsemblBacteria»
0.0
BATDEDRAFT_88661 Cleavage stimulation factor 50 kDa subunit Batrachochytrium dendrobatidis
TI:109871 None
 
G3QW97_GORGO
Ensembl»
0.0
CSTF1 Cleavage stimulation factor 50 kDa subunit Gorilla gorilla
TI:9593 None
 
I1GN67_BRADI
EnsemblPlants»
0.0
100821755 Cleavage stimulation factor 50 kDa subunit Brachypodium distachyon
TI:15368 None
 
I1KD31_SOYBN
EnsemblPlants»
0.0
100809908 Cleavage stimulation factor 50 kDa subunit Glycine max
TI:3847 None
 
K4AIS5_SETIT
EnsemblPlants»
0.0
Cleavage stimulation factor 50 kDa subunit Setaria italica
TI:4555 None
 
M3X8P0_FELCA
Ensembl»
0.0
CSTF1 Cleavage stimulation factor 50 kDa subunit Felis catus
TI:9685 None
 
Q19864_CAEEL
WormBase»
0.0
cpf-1 Cleavage stimulation factor 50 kDa subunit Caenorhabditis elegans
TI:6239 None
 
Q387U0_TRYB2
VEuPathDB»
0.0
Tb10.61.0570 Small ribosomal subunit protein RACK1 (Cleavage stimulation factor
50 kDa subunit) (Guanine nucleotide-binding protein subunit beta-like protein)		 Trypanosoma brucei
TI:5691 None
 
Q4Q4J2_LEIMA
EnsemblProtists»
0.0
LMJF_33_0280 Small ribosomal subunit protein RACK1 (Cleavage stimulation factor
50 kDa subunit) (Guanine nucleotide-binding protein subunit beta-like protein)		 Leishmania major
TI:5664 None
 
Q54XS9_DICDI
dictyBase»
0.5
cstf1 Cleavage stimulation factor 50 kDa subunit Dictyostelium discoideum
TI:44689 None
 
Q6DFC3_XENLA
Xenbase»
0.0
cstf1.L Cleavage stimulation factor 50 kDa subunit Xenopus laevis
TI:8355 None
 
Q7QCR7_ANOGA
EnsemblMetazoa»
0.0
1273194 WD repeat-containing protein 55 homolog
(Cleavage stimulation factor 50 kDa subunit)		 Anopheles gambiae
TI:7165 None
 
Q7ZYG2_XENLA
Xenbase»
0.0
cstf1.S Cleavage stimulation factor 50 kDa subunit Xenopus laevis
TI:8355 None
 
Q9ARL8_HORVV
EnsemblPlants»
0.0
Cleavage stimulation factor 50 kDa subunit Hordeum vulgare
TI:4513 None
 
U5D614_AMBTC
EnsemblPlants»
0.0
AMTR_s00047p00220400 Cleavage stimulation factor 50 kDa subunit Amborella trichopoda
TI:13333 None
 
A0A1S3YD10_TOBAC
EnsemblFungi»
0.0
LOC107774759 Cleavage stimulation factor 50 kDa subunit Nicotiana tabacum
TI:4097 None
   
A0A1S3YTY3_TOBAC
EnsemblFungi»
0.0
LOC107779660 Cleavage stimulation factor 50 kDa subunit Nicotiana tabacum
TI:4097 None
   
A0A1U8A7S2_NELNU
EnsemblBacteria»
0.0
LOC104597906 Cleavage stimulation factor 50 kDa subunit Nelumbo nucifera
TI:4432 None
   
A0A1U8NZA9_GOSHI
Ensembl»
0.0
LOC107953492 Cleavage stimulation factor 50 kDa subunit Gossypium hirsutum
TI:3635 None
   
A0A3B6LS37_WHEAT
EnsemblPlants»
0.0
Cleavage stimulation factor 50 kDa subunit Triticum aestivum
TI:4565 None
   
A0A3B6MWQ4_WHEAT
EnsemblPlants»
0.0
Cleavage stimulation factor 50 kDa subunit Triticum aestivum
TI:4565 None
   
A0A3Q7J7Q7_SOLLC
EnsemblPlants»
0.0
Cleavage stimulation factor 50 kDa subunit Solanum lycopersicum
TI:4081 None
   
A0A6I8P949_ORNAN
Ensembl»
0.0
CSTF1 Cleavage stimulation factor 50 kDa subunit Ornithorhynchus anatinus
TI:9258 None
   
A0A7M7NXV4_STRPU
EnsemblMetazoa»
0.0
Cleavage stimulation factor 50 kDa subunit Strongylocentrotus purpuratus
TI:7668 None
   
A0A804JPL0_MUSAM
EnsemblPlants»
0.0
Cleavage stimulation factor 50 kDa subunit Musa acuminata
TI:4641 None
   
A0A8I3Q2Q2_CANLF
Ensembl»
0.0
CSTF1 Cleavage stimulation factor 50 kDa subunit Canis lupus
TI:9612 None
   
A0A8R1UQ40_PRIPA
EnsemblMetazoa»
0.0
WBGene00274723 Cleavage stimulation factor 50 kDa subunit Pristionchus pacificus
TI:54126 None
   
E1C3Q4_CHICK
Ensembl»
0.0
CSTF1 Cleavage stimulation factor 50 kDa subunit Gallus gallus
TI:9031 None
   
F6S5J7_HORSE
Ensembl»
0.0
CSTF1 Cleavage stimulation factor 50 kDa subunit Equus caballus
TI:9796 None
   
F6SML9_CIOIN
Ensembl»
0.0
LOC100183358 Cleavage stimulation factor 50 kDa subunit Ciona intestinalis
TI:7719 None
   
F7ARW5_MONDO
Ensembl»
0.0
CSTF1 Cleavage stimulation factor 50 kDa subunit Monodelphis domestica
TI:13616 None
   
H2M085_ORYLA
Ensembl»
0.0
cstf1 Cleavage stimulation factor 50 kDa subunit Oryzias latipes
TI:8090 None
   
H9GMV4_ANOCA
Ensembl»
0.0
CSTF1 Cleavage stimulation factor 50 kDa subunit Anolis carolinensis
TI:28377 None
   
M1C4S1_SOLTU
EnsemblPlants»
0.0
Cleavage stimulation factor 50 kDa subunit Solanum tuberosum
TI:4113 None
   
M4D934_BRACM
EnsemblPlants»
0.0
Cleavage stimulation factor 50 kDa subunit Brassica campestris
TI:3711 None