Collated Gene Ontology terms

Biological process: structural constituent of ribosome(2016) copper ion binding(2021) RNA binding(2014)

Molecular function: mitochondrial translation2016, 2025 apoptotic process2025 anatomical structure morphogenesis2005

Cellular component: mitochondrial large ribosomal subunit2016, 2018, 2019, 2025 mitochondrial ribosome2003, 2004, 2017, 2025 mitochondrion2009, 2011, 2021, 2024, 2025 ribosome2025 ribonucleoprotein complex2025 mitochondrial inner membrane2014, 2025 cytosol2019, 2025 chloroplast2018 plasma membrane2025 nucleus2005
nucleolus2025

Phylogenetic distribution

Chordates: 20/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 0/1 
Porifera: 0/0 
Choanoflagellates+: 0/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 0/3 
Excavates: 0/4 
Harosa: 1/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2015 2016 2017 2018 2019 2020 2021 2022 2023 2024 2025 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
RM40_MOUSE
Ensembl»
0.6
Mrpl40 Large ribosomal subunit protein mL40 (39S ribosomal protein L40, mitochondrial)
(L40mt) (MRP-L40) (Nuclear localization signal-containing protein deleted in velocardiofacial syndrome homolog)		 Mus musculus
TI:10090 None
 
RM40_HUMAN
Ensembl»
2.0
MRPL40 Large ribosomal subunit protein mL40 (39S ribosomal protein L40, mitochondrial) (L40mt)
(MRP-L40) (Nuclear localization signal-containing protein deleted in velocardiofacial syndrome) (Up-regulated in metastasis)		 Homo sapiens
TI:9606 None
 
Q9VGP7_DROME
FlyBase»
1.8
mRpL40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Drosophila melanogaster
TI:7227 None
 
RM40_RAT
RGD»
0.0
Mrpl40 Large ribosomal subunit protein mL40 (39S
ribosomal protein L40, mitochondrial) (L40mt) (MRP-L40)		 Rattus norvegicus
TI:10116 None
 
G1KBY0_ANOCA
Ensembl»
0.0
Large ribosomal subunit protein mL40 (39S ribosomal
protein L40, mitochondrial) (Migration and invasion enhancer 1)		 Anolis carolinensis
TI:28377 None
   
Q5PPR8_XENLA
Xenbase»
0.0
mrpl40.S Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Xenopus laevis
TI:8355 None
 
Q9M0V5_ARATH
TAIR»
0.5
At4g05400 At4g05400 (Copper ion binding protein) Arabidopsis thaliana
TI:3702 None
 
A0A2A6B484_PRIPA
EnsemblMetazoa»
0.0
WBGene00115061 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Pristionchus pacificus
TI:54126 None
   
A0A3B3IFD9_ORYLA
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Oryzias latipes
TI:8090 None
   
A0A5G2R2V2_PIG
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Sus scrofa
TI:9823 None
   
A0A6I8NSY2_ORNAN
Ensembl»
0.0
Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Ornithorhynchus anatinus
TI:9258 None
   
A0A7M7N9E6_STRPU
EnsemblMetazoa»
0.0
Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Strongylocentrotus purpuratus
TI:7668 None
   
A0A7M7PFM5_STRPU
EnsemblMetazoa»
0.0
Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Strongylocentrotus purpuratus
TI:7668 None
   
A0A803SS87_ANOCA
Ensembl»
0.0
mrpl40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Anolis carolinensis
TI:28377 None
   
A0A8V0ZZP5_CHICK
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Gallus gallus
TI:9031 None
   
A0A9L0TIR7_HORSE
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Equus caballus
TI:9796 None
   
A4IHC1_XENTR
Xenbase»
0.0
mrpl40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Xenopus tropicalis
TI:8364 None
 
A8WMQ4_CAEBR
WormBase»
0.0
mrpl-40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Caenorhabditis briggsae
TI:6238 None
 
B3S0G1_TRIAD
CTD»
0.0
TRIADDRAFT_57036 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Trichoplax adhaerens
TI:10228 None
 
B7PR36_IXOSC
EnsemblMetazoa»
0.0
IscW_ISCW024335 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Ixodes scapularis
TI:6945 None
 
D6WU16_TRICA
euHCVdb»
0.0
AUGUSTUS-3.0.2_15959 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Tribolium castaneum
TI:7070 None
 
E9HJZ4_DAPPU
euHCVdb»
0.0
DAPPUDRAFT_203518 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Daphnia pulex
TI:6669 None
 
F6XNB9_MONDO
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Monodelphis domestica
TI:13616 None
   
F7GN40_MACMU
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Macaca mulatta
TI:9544 None
 
G3R9E9_GORGO
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Gorilla gorilla
TI:9593 None
 
H2QL85_PANTR
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Pan troglodytes
TI:9598 None
 
Q66I86_DANRE
ZFIN»
0.0
mrpl40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Danio rerio
TI:7955 None
 
Q7QER3_ANOGA
EnsemblMetazoa»
0.0
1272158 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Anopheles gambiae
TI:7165 None
 
Q9TZ90_CAEEL
WormBase»
0.0
mrpl-40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Caenorhabditis elegans
TI:6239 None
 
T1ELL6_HELRO
EnsemblMetazoa»
0.0
20197466 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Helobdella robusta
TI:6412 None
 
W5M1B9_LEPOC
Ensembl»
0.0
Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Lepisosteus oculatus
TI:7918 None
 
A0A8I3Q6S0_CANLF
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Canis lupus
TI:9612 None
   
A0AAA9SEM5_BOVIN
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40
(39S ribosomal protein L40, mitochondrial)		 Bos taurus
TI:9913 None
   
A0ABI7ZZU4_FELCA
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40 Felis catus
TI:9685 None
   
A0A1S4BHU9_TOBAC
euHCVdb»
0.0
LOC107808434 Uncharacterized protein LOC107808434 Nicotiana tabacum
TI:4097 None
   
A0A1S4CLI0_TOBAC
neXtProt»
0.0
LOC107820362 Uncharacterized protein LOC107820362 Nicotiana tabacum
TI:4097 None
   
A0A1U8HPS7_GOSHI
euHCVdb»
0.0
LOC107886003 Copper ion binding Gossypium hirsutum
TI:3635 None
   
A0A1U8L8N1_GOSHI
neXtProt»
0.0
LOC107924898 Copper ion binding protein Gossypium hirsutum
TI:3635 None
   
A0A1U8NQ38_GOSHI
euHCVdb»
0.0
LOC107950583 Copper ion binding Gossypium hirsutum
TI:3635 None
   
A0A9R0JY15_SPIOL
neXtProt»
0.0
LOC110790280 Copper ion binding Spinacia oleracea
TI:3562 None
   
F4JIM4_ARATH
TAIR»
0.0
At4g21140 Copper ion-binding protein Arabidopsis thaliana
TI:3702 None
 
A0A022R072_ERYGU
euHCVdb»
0.0
MIMGU_mgv1a012617mg Uncharacterized protein Erythranthe guttata
TI:4155 None
 
A0A061DR18_THECC
euHCVdb»
0.0
TCM_001357 Copper ion binding isoform 1 Theobroma cacao
TI:3641 None
 
A0A067GIP0_CITSI
neXtProt»
0.0
CISIN_1g026298mg Uncharacterized protein Citrus sinensis
TI:2711 None
 
A0A078HQX0_BRANA
euHCVdb»
0.0
BnaC09g21760D (rape) hypothetical
protein (BnaC09g21760D protein)		 Brassica napus
TI:3708 None
 
A0A078IAM7_BRANA
neXtProt»
0.0
BnaA09g19730D (rape) hypothetical
protein (BnaA09g19730D protein)		 Brassica napus
TI:3708 None
 
A0A0A0L3Z1_CUCSA
euHCVdb»
0.0
Csa_3G119830 Copper ion binding protein Cucumis sativus
TI:3659 None
 
A0A0K9PHF7_ZOSMR
euHCVdb»
0.0
ZOSMA_239G00200 Uncharacterized protein Zostera marina
TI:29655 None
 
A0A0R0J624_SOYBN
EnsemblPlants»
0.0
LOC100776061 Copper ion binding Glycine max
TI:3847 None
 
A0A1U7ZHR1_NELNU
euHCVdb»
0.0
LOC104590280 Uncharacterized protein LOC104590280 Nelumbo nucifera
TI:4432 None
   
A0A251V1X2_HELAN
neXtProt»
0.0
HannXRQ_Chr04g0120611 Copper ion binding protein Helianthus annuus
TI:4232 None
 
A0A2C9VN55_MANES
euHCVdb»
0.0
MANES_06G055200v8 Copper ion binding Manihot esculenta
TI:3983 None
 
A0A2G2YY08_CAPAN
euHCVdb»
0.0
T459_21880 Copper ion binding protein Capsicum annuum
TI:4072 None
 
A0A2I4GZM7_JUGRE
euHCVdb»
0.0
LOC109012275 Uncharacterized protein LOC109012275 Juglans regia
TI:51240 None
   
A0A2K1J577_PHYPA
EnsemblPlants»
0.0
LOC112294878 Uncharacterized protein Physcomitrium patens
TI:3218 None
 
A0A2R6XP74_MARPO
euHCVdb»
0.0
MARPO_0007s0267 Uncharacterized protein Marchantia polymorpha
TI:3197 None
 
A0A3B5Z4N5_WHEAT
EnsemblPlants»
0.0
LOC123099170 Copper ion binding protein Triticum aestivum
TI:4565 None
   
A0A3B5ZS20_WHEAT
EnsemblPlants»
0.0
LOC123181017 Copper ion binding protein Triticum aestivum
TI:4565 None
   
A0A3B6HYX7_WHEAT
EnsemblPlants»
0.0
LOC123087715 Uncharacterized protein Triticum aestivum
TI:4565 None
   
A0A3B6LST8_WHEAT
EnsemblPlants»
0.0
Uncharacterized protein Triticum aestivum
TI:4565 None
   
A0A3B6N0N7_WHEAT
EnsemblPlants»
0.0
LOC123123718 Copper ion binding protein Triticum aestivum
TI:4565 None
   
A0A3Q7EL97_SOLLC
EnsemblPlants»
0.0
Copper ion binding protein Solanum lycopersicum
TI:4081 None
   
A0A804L4U7_MUSAM
EnsemblPlants»
0.0
GSMUA_19110.1 (wild Malaysian banana) hypothetical protein Musa acuminata
TI:4641 None
 
A0A8I6XZJ6_HORVV
EnsemblPlants»
0.0
LOC123394990 Uncharacterized protein Hordeum vulgare
TI:4513 None
   
A0A9K3NTM3_HELAN
euHCVdb»
0.0
HanXRQr2_Chr04g0182311 39S ribosomal protein L40 Helianthus annuus
TI:4232 None
 
A0A9R1UYB7_LACSA
euHCVdb»
0.0
LSAT_V11C700343090 Uncharacterized protein Lactuca sativa
TI:4236 None
 
A0A9R1W8N7_LACSA
euHCVdb»
0.0
LSAT_V11C300122220 Uncharacterized protein Lactuca sativa
TI:4236 None
 
B4F7S5_MAIZE
EnsemblPlants»
0.0
LOC100272832 Copper ion binding Zea mays
TI:4577 None
 
B9I1E6_POPTR
euHCVdb»
0.0
POPTR_011G098000 Uncharacterized protein Populus trichocarpa
TI:3694 None
 
B9SB38_RICCO
neXtProt»
0.0
RCOM_1338770 Copper ion binding protein Ricinus communis
TI:3988 None
 
C5XS95_SORBI
neXtProt»
0.0
SORBI_3004G010700 Copper ion binding Sorghum bicolor
TI:4558 None
 
F6I695_VITVI
euHCVdb»
0.0
VIT_15s0046g01480 Uncharacterized protein Vitis vinifera
TI:29760 None
 
H3GBC0_PHYRM
EnsemblProtists»
0.0
Uncharacterized protein Phytophthora ramorum
TI:164328 None
 
I1I4M2_BRADI
EnsemblPlants»
0.0
LOC100836882 Copper ion binding protein Brachypodium distachyon
TI:15368 None
 
I1MKP1_SOYBN
EnsemblPlants»
0.0
LOC100778582 Uncharacterized protein Glycine max
TI:3847 None
 
K3YLH2_SETIT
EnsemblPlants»
0.0
Uncharacterized protein Setaria italica
TI:4555 None
 
K3YUY3_SETIT
EnsemblPlants»
0.0
LOC101770749 Copper ion binding Setaria italica
TI:4555 None
 
K3YVZ8_SETIT
EnsemblPlants»
0.0
SETIT_1G010700v2 Uncharacterized protein Setaria italica
TI:4555 None
 
M0ZGZ5_SOLTU
EnsemblPlants»
0.0
LOC102596043 Copper ion binding protein Solanum tuberosum
TI:4113 None
   
M4DAJ3_BRACM
EnsemblPlants»
0.0
Uncharacterized protein Brassica campestris
TI:3711 None
   
M4ELA7_BRACM
EnsemblPlants»
0.0
Uncharacterized protein Brassica campestris
TI:3711 None
   
Q5QMU6_ORYSJ
neXtProt»
0.0
Os01g0511200 Os01g0511200 protein (cDNA
clone:001-016-F02, full insert sequence)		 Oryza sativa
TI:4530 None
 
W1NJ41_AMBTC
euHCVdb»
0.0
AMTR_s00023p00046070 Copper ion binding protein Amborella trichopoda
TI:13333 None
 
A0A072TMA7_MEDTR
EnsemblPlants»
0.0
25500592 Copper ion-binding protein Medicago truncatula
TI:3880 None
 
A0A1Y1HIE4_KLENI
euHCVdb»
0.0
KFL_000100210 Uncharacterized protein Klebsormidium nitens
TI:105231 None
 
A0A251NZU2_PRUPE
euHCVdb»
0.0
PRUPE_6G341300 Uncharacterized protein Prunus persica
TI:3760 None