Collated Gene Ontology terms

Biological process: structural constituent of ribosome(2016) copper ion binding(2021) RNA binding(2014)

Molecular function: mitochondrial translation2016, 2020 positive regulation of filopodium assembly2017 negative regulation of apoptotic process2017 anatomical structure morphogenesis2005

Cellular component: mitochondrial large ribosomal subunit2016, 2018, 2019, 2020, 2024 mitochondrial ribosome2003, 2004, 2017, 2024 mitochondrion2009, 2011, 2021, 2023, 2024 ribosome2024 ribonucleoprotein complex2024 nucleolus2023, 2024 mitochondrial inner membrane2014, 2020 cytosol2017, 2019 nucleus2005

Phylogenetic distribution

Chordates: 18/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 0/1 
Porifera: 0/0 
Choanoflagellates+: 0/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 0/3 
Excavates: 0/4 
Harosa: 1/4 
Hacrobia: 0/0 
Plants: 35/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
W1NJ41_AMBTC
EnsemblPlants»
0.0
AMTR_s00023p00046070 Copper ion binding protein Amborella trichopoda
TI:13333 None
 
A0A803SS87_ANOCA
Ensembl»
0.0
mrpl40 Large ribosomal subunit protein mL40 Anolis carolinensis
TI:28377 None
   
G1KBY0_ANOCA
Ensembl»
0.0
Large ribosomal subunit protein mL40 Anolis carolinensis
TI:28377 None
   
Q7QER3_ANOGA
EnsemblMetazoa»
0.0
1272158 Large ribosomal subunit protein mL40 Anopheles gambiae
TI:7165 None
 
F4JIM4_ARATH
TAIR»
0.0
At4g21140 Copper ion-binding protein Arabidopsis thaliana
TI:3702 None
 
Q9M0V5_ARATH
TAIR»
0.5
At4g05400 At4g05400 (Copper ion binding
protein) (Uncharacterized protein At4g05400)		 Arabidopsis thaliana
TI:3702 None
 
I1I4M2_BRADI
EnsemblPlants»
0.0
100836882 Copper ion binding protein Brachypodium distachyon
TI:15368 None
 
A0A078HQX0_BRANA
EnsemblPlants»
0.0
BnaC09g21760D (rape) hypothetical
protein (BnaC09g21760D protein)		 Brassica napus
TI:3708 None
 
A0A078IAM7_BRANA
EnsemblPlants»
0.0
BnaA09g19730D (rape) hypothetical
protein (BnaA09g19730D protein)		 Brassica napus
TI:3708 None
 
M4DAJ3_BRACM
EnsemblPlants»
0.0
Uncharacterized protein Brassica campestris
TI:3711 None
   
M4ELA7_BRACM
EnsemblPlants»
0.0
Uncharacterized protein Brassica campestris
TI:3711 None
   
A8WMQ4_CAEBR
WormBase»
0.0
mrpl-40 Large ribosomal subunit protein mL40 Caenorhabditis briggsae
TI:6238 None
 
Q9TZ90_CAEEL
WormBase»
0.0
mrpl-40 Large ribosomal subunit protein mL40 Caenorhabditis elegans
TI:6239 None
 
A0A8I3Q6S0_CANLF
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40 Canis lupus
TI:9612 None
   
A0A2G2YY08_CAPAN
EnsemblPlants»
0.0
T459_21880 Copper ion binding protein Capsicum annuum
TI:4072 None
 
A0A067GIP0_CITSI
Ensembl»
0.0
CISIN_1g026298mg Ribosome biogenesis protein NOP53 Citrus sinensis
TI:2711 None
 
A0A0A0L3Z1_CUCSA
EnsemblPlants»
0.0
Csa_3G119830 Copper ion binding protein Cucumis sativus
TI:3659 None
 
Q66I86_DANRE
ZFIN»
0.0
zgc:103495 Large ribosomal subunit protein mL40 Danio rerio
TI:7955 None
 
E9HJZ4_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_203518 Large ribosomal subunit protein mL40 Daphnia pulex
TI:6669 None
 
Q9VGP7_DROME
FlyBase»
1.8
mRpL40 Large ribosomal subunit protein mL40 Drosophila melanogaster
TI:7227 None
 
A0A022R072_ERYGU
EnsemblFungi»
0.0
MIMGU_mgv1a012617mg Ribosome biogenesis protein NOP53 Erythranthe guttata
TI:4155 None
 
M3VZ28_FELCA
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40 Felis catus
TI:9685 None
 
A0A8V0ZZP5_CHICK
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40 Gallus gallus
TI:9031 None
   
A0A0R0J624_SOYBN
EnsemblPlants»
0.0
GLYMA_07G060800 Copper ion binding Glycine max
TI:3847 None
 
I1MKP1_SOYBN
EnsemblPlants»
0.0
100778582 Uncharacterized protein Glycine max
TI:3847 None
 
G3R9E9_GORGO
Ensembl»
0.0
Large ribosomal subunit protein mL40 Gorilla gorilla
TI:9593 None
 
A0A1U8HPS7_GOSHI
Ensembl»
0.0
LOC107886003 Uncharacterized protein LOC107886003 Gossypium hirsutum
TI:3635 None
   
A0A1U8L8N1_GOSHI
Ensembl»
0.0
LOC107924898 Uncharacterized protein LOC107924898 Gossypium hirsutum
TI:3635 None
   
A0A1U8NQ38_GOSHI
Ensembl»
0.0
LOC107950583 Uncharacterized protein LOC107950583 Gossypium hirsutum
TI:3635 None
   
A0A1U8NQT4_GOSHI
Ensembl»
0.0
LOC107950158 Uncharacterized protein LOC107950158 Gossypium hirsutum
TI:3635 None
   
A0A251V1X2_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr04g0120611 Copper ion binding protein Helianthus annuus
TI:4232 None
 
T1ELL6_HELRO
EnsemblMetazoa»
0.0
20197466 Large ribosomal subunit protein mL40 Helobdella robusta
TI:6412 None
 
RM40_HUMAN
Ensembl»
2.0
MRPL40 Large ribosomal subunit protein mL40 (39S ribosomal protein L40, mitochondrial) (L40mt)
(MRP-L40) (Nuclear localization signal-containing protein deleted in velocardiofacial syndrome) (Up-regulated in metastasis)		 Homo sapiens
TI:9606 None
 
A0A8I6XZJ6_HORVV
EnsemblPlants»
0.0
Uncharacterized protein Hordeum vulgare
TI:4513 None
   
B7PR36_IXOSC
EnsemblMetazoa»
0.0
IscW_ISCW024335 Large ribosomal subunit protein mL40 Ixodes scapularis
TI:6945 None
 
A0A2I4GZM7_JUGRE
EnsemblPlants»
0.0
LOC109012275 Uncharacterized protein LOC109012275 Juglans regia
TI:51240 None
 
A0A1Y1HIE4_KLENI
EnsemblPlants»
0.0
KFL_000100210 Uncharacterized protein Klebsormidium nitens
TI:105231 None
 
W5M1B9_LEPOC
Ensembl»
0.0
Large ribosomal subunit protein mL40 Lepisosteus oculatus
TI:7918 None
 
F7GN40_MACMU
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40 Macaca mulatta
TI:9544 None
 
A0A2C9VN55_MANES
EnsemblPlants»
0.0
MANES_06G055200 Copper ion binding Manihot esculenta
TI:3983 None
 
A0A2R6XP74_MARPO
EnsemblPlants»
0.0
MARPO_0007s0267 Uncharacterized protein Marchantia polymorpha
TI:3197 None
 
A0A072TMA7_MEDTR
EnsemblPlants»
0.0
25500592 Copper ion-binding protein Medicago truncatula
TI:3880 None
 
F6XNB9_MONDO
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40 Monodelphis domestica
TI:13616 None
   
RM40_MOUSE
Ensembl»
0.6
Mrpl40 Large ribosomal subunit protein mL40 (39S ribosomal protein L40, mitochondrial)
(L40mt) (MRP-L40) (Nuclear localization signal-containing protein deleted in velocardiofacial syndrome homolog)		 Mus musculus
TI:10090 None
 
A0A804L4U7_MUSAM
EnsemblPlants»
0.0
103970556 (wild Malaysian banana) hypothetical protein Musa acuminata
TI:4641 None
 
A0A1U7ZHR1_NELNU
EnsemblBacteria»
0.0
LOC104590280 Uncharacterized protein LOC104590280 Nelumbo nucifera
TI:4432 None
   
A0A1S4BHU9_TOBAC
EnsemblFungi»
0.0
LOC107808434 Uncharacterized protein LOC107808434 Nicotiana tabacum
TI:4097 None
   
A0A1S4CLI0_TOBAC
EnsemblFungi»
0.0
LOC107820362 Uncharacterized protein LOC107820362 Nicotiana tabacum
TI:4097 None
   
A0A6I8NSY2_ORNAN
Ensembl»
0.0
Large ribosomal subunit protein mL40 Ornithorhynchus anatinus
TI:9258 None
   
Q5QMU6_ORYSJ
EnsemblPlants»
0.0
Os01g0511200 Os01g0511200 protein (cDNA
clone:001-016-F02, full insert sequence)		 Oryza sativa
TI:4530 None
 
A0A3B3IFD9_ORYLA
Ensembl»
0.0
mrpl40 Large ribosomal subunit protein mL40 Oryzias latipes
TI:8090 None
   
H2QL85_PANTR
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40 Pan troglodytes
TI:9598 None
 
A0A2K1J577_PHYPA
EnsemblPlants»
0.0
PHYPA_022535 Uncharacterized protein Physcomitrium patens
TI:3218 None
 
H3GBC0_PHYRM
EnsemblProtists»
0.0
Myb-like domain-containing protein Phytophthora ramorum
TI:164328 None
 
B9I1E6_POPTR
EnsemblPlants»
0.0
POPTR_011G098000 Uncharacterized protein Populus trichocarpa
TI:3694 None
 
A0A2A6B484_PRIPA
EnsemblMetazoa»
0.0
WBGene00115061 Large ribosomal subunit protein mL40 Pristionchus pacificus
TI:54126 None
 
A0A251NZU2_PRUPE
EnsemblPlants»
0.0
PRUPE_6G341300 Uncharacterized protein Prunus persica
TI:3760 None
 
A0A8I5ZP13_RAT
RGD»
0.0
ENSRNOG00000067330 Large ribosomal subunit protein mL40 Rattus norvegicus
TI:10116 None
   
RM40_RAT
RGD»
0.0
Mrpl40 Large ribosomal subunit protein mL40 (39S
ribosomal protein L40, mitochondrial) (L40mt) (MRP-L40)		 Rattus norvegicus
TI:10116 None
 
B9SB38_RICCO
EnsemblBacteria»
0.0
RCOM_1338770 Copper ion binding protein Ricinus communis
TI:3988 None
 
K3YLH2_SETIT
EnsemblPlants»
0.0
Uncharacterized protein Setaria italica
TI:4555 None
 
K3YUY3_SETIT
EnsemblPlants»
0.0
101770749 Copper ion binding Setaria italica
TI:4555 None
 
K3YVZ8_SETIT
EnsemblPlants»
0.0
SETIT_1G010700v2 Uncharacterized protein Setaria italica
TI:4555 None
 
A0A3Q7EL97_SOLLC
EnsemblPlants»
0.0
Copper ion binding protein Solanum lycopersicum
TI:4081 None
   
M0ZGZ5_SOLTU
EnsemblPlants»
0.0
Copper ion binding protein Solanum tuberosum
TI:4113 None
   
C5XS95_SORBI
EnsemblPlants»
0.0
SORBI_3004G010700 Copper ion binding Sorghum bicolor
TI:4558 None
 
A0A7M7N9E6_STRPU
EnsemblMetazoa»
0.0
Large ribosomal subunit protein mL40 Strongylocentrotus purpuratus
TI:7668 None
   
A0A7M7PFM5_STRPU
EnsemblMetazoa»
0.0
Large ribosomal subunit protein mL40 Strongylocentrotus purpuratus
TI:7668 None
   
A0A5G2R2V2_PIG
Ensembl»
0.0
MRPL40 Large ribosomal subunit protein mL40 Sus scrofa
TI:9823 None
   
A0A061DR18_THECC
EnsemblPlants»
0.0
TCM_001357 Copper ion binding isoform 1 Theobroma cacao
TI:3641 None
 
D6WU16_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_15959 Large ribosomal subunit protein mL40 Tribolium castaneum
TI:7070 None
 
B3S0G1_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_57036 Large ribosomal subunit protein mL40 Trichoplax adhaerens
TI:10228 None
 
A0A3B5Z4N5_WHEAT
EnsemblPlants»
0.0
CFC21_009055 Copper ion binding protein Triticum aestivum
TI:4565 None
 
A0A3B5ZS20_WHEAT
EnsemblPlants»
0.0
CFC21_011226 Copper ion binding protein Triticum aestivum
TI:4565 None
 
A0A3B6HYX7_WHEAT
EnsemblPlants»
0.0
CFC21_054255 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A3B6LST8_WHEAT
EnsemblPlants»
0.0
CFC21_073404 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A3B6N0N7_WHEAT
EnsemblPlants»
0.0
Copper ion binding protein Triticum aestivum
TI:4565 None
   
F6I695_VITVI
EnsemblPlants»
0.0
VIT_15s0046g01480 Uncharacterized protein Vitis vinifera
TI:29760 None
 
A4IHC1_XENTR
Xenbase»
0.0
mrpl40 Large ribosomal subunit protein mL40 Xenopus tropicalis
TI:8364 None
 
Q5PPR8_XENLA
Xenbase»
0.0
mrpl40.S Large ribosomal subunit protein mL40 Xenopus laevis
TI:8355 None
 
B4F7S5_MAIZE
EnsemblPlants»
0.0
100272832 Copper ion binding Zea mays
TI:4577 None
 
A0A0K9PHF7_ZOSMR
EnsemblPlants»
0.0
ZOSMA_239G00200 Uncharacterized protein Zostera marina
TI:29655 None