Collated Gene Ontology terms

Biological process: molecular sequestering activity(2023, 2025) protein-containing complex binding(2022, 2025)

Molecular function: spliceosomal tri-snRNP complex assembly2022, 2025 mRNA processing2025 RNA splicing2025 spliceosomal snRNP assembly2023, 2025

Cellular component: U5 snRNP2023, 2025 nucleus2018, 2023, 2025 cytoplasm2023, 2025 spliceosomal complex2025

Phylogenetic distribution

Chordates: 18/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 0/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 0/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 0/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 0/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 0/3 
Excavates: 0/4 
Harosa: 0/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2015 2016 2017 2018 2019 2020 2021 2022 2023 2024 2025 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
A0A3B3HWY6_ORYLA
Ensembl»
0.0
U5 small nuclear ribonucleoprotein TSSC4 Oryzias latipes
TI:8090 None
   
A0A3B6AYR4_WHEAT
EnsemblPlants»
0.0
U5 small nuclear ribonucleoprotein TSSC4 Triticum aestivum
TI:4565 None
   
A0A3B6DEA2_WHEAT
EnsemblPlants»
0.0
U5 small nuclear ribonucleoprotein TSSC4 Triticum aestivum
TI:4565 None
   
A0A7M7LLQ3_STRPU
EnsemblMetazoa»
0.0
U5 small nuclear ribonucleoprotein TSSC4 Strongylocentrotus purpuratus
TI:7668 None
   
M0ZYM1_SOLTU
EnsemblPlants»
0.0
Uncharacterized protein Solanum tuberosum
TI:4113 None
   
M4CX43_BRACM
EnsemblPlants»
0.0
U5 small nuclear ribonucleoprotein TSSC4 Brassica campestris
TI:3711 None
   
M4CX90_BRACM
EnsemblPlants»
0.0
Uncharacterized protein Brassica campestris
TI:3711 None
   
W5NLC1_LEPOC
Ensembl»
0.0
U5 small nuclear ribonucleoprotein TSSC4 Lepisosteus oculatus
TI:7918 None
 
G7KX98_MEDTR
EnsemblPlants»
0.0
11427063 U5 small nuclear ribonucleoprotein TSSC4 Medicago truncatula
TI:3880 None
 
Q7Q7A9_ANOGA
EnsemblMetazoa»
0.0
1276108 U5 small nuclear ribonucleoprotein TSSC4 Anopheles gambiae
TI:7165 None
 
B7Q064_IXOSC
EnsemblMetazoa»
0.0
8033953 U5 small nuclear ribonucleoprotein TSSC4 Ixodes scapularis
TI:6945 None
 
W1PDY8_AMBTC
euHCVdb»
0.0
AMTR_s00016p00104610 U5 small nuclear ribonucleoprotein TSSC4 Amborella trichopoda
TI:13333 None
 
D6W6F8_TRICA
euHCVdb»
0.0
AUGUSTUS-3.0.2_11507 U5 small nuclear ribonucleoprotein TSSC4 Tribolium castaneum
TI:7070 None
 
M4CMW0_BRACM
EnsemblPlants»
0.0
BRAA05T20213Z Uncharacterized protein Brassica campestris
TI:3711 None
 
A0A078IRS9_BRANA
euHCVdb»
0.0
BnaA05g35050D BnaA05g35050D protein Brassica napus
TI:3708 None
 
A0A078H273_BRANA
neXtProt»
0.0
BnaC07g15460D BnaC07g15460D protein Brassica napus
TI:3708 None 		 
 
A0A078FA08_BRANA
euHCVdb»
0.0
BnaC09g43220D U5 small nuclear ribonucleoprotein TSSC4 Brassica napus
TI:3708 None
 
A0A078F5R1_BRANA
neXtProt»
0.0
BnaC09g43760D BnaC09g43760D protein Brassica napus
TI:3708 None
 
A0A2K3CUV5_CHLRE
euHCVdb»
0.0
CHLRE_16g684050v5 U5 small nuclear ribonucleoprotein TSSC4 Chlamydomonas reinhardtii
TI:3055 None
 
A0A067DX48_CITSI
euHCVdb»
0.0
CISIN_1g014297mg U5 small nuclear ribonucleoprotein TSSC4 Citrus sinensis
TI:2711 None
 
A0A067D1H0_CITSI
neXtProt»
0.0
CISIN_1g014551mg Uncharacterized protein Citrus sinensis
TI:2711 None
 
A0A067F4S3_CITSI
euHCVdb»
0.0
CISIN_1g015239mg Uncharacterized protein Citrus sinensis
TI:2711 None
 
A0A0A0LDS6_CUCSA
euHCVdb»
0.0
Csa_3G599460 U5 small nuclear ribonucleoprotein TSSC4 Cucumis sativus
TI:3659 None
 
E9HFT9_DAPPU
euHCVdb»
0.0
DAPPUDRAFT_329147 U5 small nuclear ribonucleoprotein TSSC4 Daphnia pulex
TI:6669 None
 
Q9VT74_DROME
FlyBase»
1.0
Dmel\CG6674 U5 small nuclear ribonucleoprotein TSSC4 Drosophila melanogaster
TI:7227 None
 
A0A804IEB3_MUSAM
EnsemblPlants»
0.0
GSMUA_197900.1 U5 small nuclear ribonucleoprotein TSSC4 Musa acuminata
TI:4641 None
 
A0A9K3J9C6_HELAN
euHCVdb»
0.0
HanXRQr2_Chr04g0172781 Uncharacterized protein Helianthus annuus
TI:4232 None 		 
 
A0A9K3DHG6_HELAN
euHCVdb»
0.0
HanXRQr2_Chr17g0802701 U5 small nuclear ribonucleoprotein TSSC4 Helianthus annuus
TI:4232 None
 
A0A251T653_HELAN
euHCVdb»
0.0
HannXRQ_Chr12g0384731 HanXRQr2_Chr12g0564661 Tumor suppressing sub-chromosomal
transferable candidate 4		 Helianthus annuus
TI:4232 None
 
A0A251RQE7_HELAN
euHCVdb»
0.0
HannXRQ_Chr17g0550921 U5 small nuclear ribonucleoprotein TSSC4 Helianthus annuus
TI:4232 None
 
A0A1Y1I681_KLENI
euHCVdb»
0.0
KFL_002910030 U5 small nuclear ribonucleoprotein TSSC4 Klebsormidium nitens
TI:105231 None
 
C0P7A6_MAIZE
EnsemblPlants»
0.0
LOC100382401 U5 small nuclear ribonucleoprotein TSSC4 Zea mays
TI:4577 None
 
C0PBP4_MAIZE
EnsemblPlants»
0.0
LOC100382918 U5 small nuclear ribonucleoprotein TSSC4 Zea mays
TI:4577 None
 
I1N816_SOYBN
EnsemblPlants»
0.0
LOC100819106 U5 small nuclear ribonucleoprotein TSSC4 Glycine max
TI:3847 None
 
A0A0R0FY87_SOYBN
EnsemblPlants»
0.0
LOC100820108 U5 small nuclear ribonucleoprotein TSSC4 Glycine max
TI:3847 None
 
A0A2K2D864_BRADI
EnsemblPlants»
0.0
LOC100842327 U5 small nuclear ribonucleoprotein TSSC4 Brachypodium distachyon
TI:15368 None
 
I1IX92_BRADI
EnsemblPlants»
0.0
LOC100846360 U5 small nuclear ribonucleoprotein TSSC4 Brachypodium distachyon
TI:15368 None
 
A0A3Q7FCP2_SOLLC
EnsemblPlants»
0.0
LOC101246682 U5 small nuclear ribonucleoprotein TSSC4 Solanum lycopersicum
TI:4081 None
   
A0A3Q7G188_SOLLC
EnsemblPlants»
0.0
LOC101252477 Uncharacterized protein Solanum lycopersicum
TI:4081 None
   
K3Y7B9_SETIT
EnsemblPlants»
0.0
LOC101755200 U5 small nuclear ribonucleoprotein TSSC4 Setaria italica
TI:4555 None
 
M1BXJ1_SOLTU
EnsemblPlants»
0.0
LOC102581607 U5 small nuclear ribonucleoprotein TSSC4 Solanum tuberosum
TI:4113 None
   
A0A1U7Z7A8_NELNU
euHCVdb»
0.0
LOC104591860 U5 small nuclear ribonucleoprotein TSSC4 Nelumbo nucifera
TI:4432 None
   
A0A1S3X776_TOBAC
euHCVdb»
0.0
LOC107761958 Uncharacterized protein LOC107761958 Nicotiana tabacum
TI:4097 None
   
A0A1S3Z336_TOBAC
euHCVdb»
0.0
LOC107782227 Uncharacterized protein LOC107782227 Nicotiana tabacum
TI:4097 None
   
A0A1U8JUW8_GOSHI
euHCVdb»
0.0
LOC107909515 Uncharacterized protein Gossypium hirsutum
TI:3635 None
   
A0A1U8MBL3_GOSHI
euHCVdb»
0.0
LOC107934923 U5 small nuclear ribonucleoprotein TSSC4 Gossypium hirsutum
TI:3635 None
   
A0A1U8MEI9_GOSHI
euHCVdb»
0.0
LOC107935850 U5 small nuclear ribonucleoprotein TSSC4 Gossypium hirsutum
TI:3635 None
   
A0A2I4FTA4_JUGRE
euHCVdb»
0.0
LOC109001856 U5 small nuclear ribonucleoprotein TSSC4 Juglans regia
TI:51240 None
   
A0A2I4GCR9_JUGRE
euHCVdb»
0.0
LOC109006727 Uncharacterized protein LOC109006727 Juglans regia
TI:51240 None
   
A0A9R0K8N1_SPIOL
euHCVdb»
0.0
LOC110800485 Protein TSSC4 Spinacia oleracea
TI:3562 None
   
A0A9R0KCG9_SPIOL
euHCVdb»
0.0
LOC110805247 U5 small nuclear ribonucleoprotein TSSC4 Spinacia oleracea
TI:3562 None
   
A0A2K1KKU4_PHYPA
EnsemblPlants»
0.0
LOC112282395 U5 small nuclear ribonucleoprotein TSSC4 Physcomitrium patens
TI:3218 None
 
A0A9J7M1J4_BRAFL
euHCVdb»
0.0
LOC118427298 U5 small nuclear ribonucleoprotein TSSC4 Branchiostoma floridae
TI:7739 None
   
A0A3B6C946_WHEAT
EnsemblPlants»
0.0
LOC123189092 U5 small nuclear ribonucleoprotein TSSC4 Triticum aestivum
TI:4565 None
   
F2CXB3_HORVV
EnsemblPlants»
0.0
LOC123426576 U5 small nuclear ribonucleoprotein TSSC4 Hordeum vulgare
TI:4513 None
 
Q5U4R4_XENLA
euHCVdb»
0.0
LOC495455 U5 small nuclear ribonucleoprotein TSSC4 Xenopus laevis
TI:8355 None
 
A0A9R1XL99_LACSA
euHCVdb»
0.0
LSAT_V11C300143360 U5 small nuclear ribonucleoprotein TSSC4 Lactuca sativa
TI:4236 None
 
A0A9R1XK34_LACSA
neXtProt»
0.0
LSAT_V11C400157120 Protein TSSC4 Lactuca sativa
TI:4236 None
 
Q9FFX8_ARATH
TAIR»
1.0
MAC12.6 U5 small nuclear ribonucleoprotein TSSC4 Arabidopsis thaliana
TI:3702 None
 
A0A2C9VGN0_MANES
euHCVdb»
0.0
MANES_08G101800v8 Uncharacterized protein Manihot esculenta
TI:3983 None
 
A0A2C9UZE4_MANES
euHCVdb»
0.0
MANES_11G076800v8 U5 small nuclear ribonucleoprotein TSSC4 Manihot esculenta
TI:3983 None
 
A0A2R6XX23_MARPO
euHCVdb»
0.0
MARPO_0001s0546 U5 small nuclear ribonucleoprotein TSSC4 Marchantia polymorpha
TI:3197 None
 
A0A022R7B7_ERYGU
euHCVdb»
0.0
MIMGU_mgv1a006809mg U5 small nuclear ribonucleoprotein TSSC4 Erythranthe guttata
TI:4155 None
 
A7RVI2_NEMVE
euHCVdb»
0.0
NEMVEDRAFT_v1g240971 U5 small nuclear ribonucleoprotein TSSC4 Nematostella vectensis
TI:45351 None
 
B9GNG1_POPTR
euHCVdb»
0.0
POPTR_002G238100 U5 small nuclear ribonucleoprotein TSSC4 Populus trichocarpa
TI:3694 None
 
A0A2K2B825_POPTR
euHCVdb»
0.0
POPTR_003G163100 Uncharacterized protein Populus trichocarpa
TI:3694 None
 
A0A2K1XVN9_POPTR
euHCVdb»
0.0
POPTR_014G143800 U5 small nuclear ribonucleoprotein TSSC4 Populus trichocarpa
TI:3694 None
 
M5XQR7_PRUPE
euHCVdb»
0.0
PRUPE_1G216200 Uncharacterized protein Prunus persica
TI:3760 None
 
A0A251Q8H4_PRUPE
euHCVdb»
0.0
PRUPE_3G313500 U5 small nuclear ribonucleoprotein TSSC4 Prunus persica
TI:3760 None
 
B9RFZ5_RICCO
neXtProt»
0.0
RCOM_1438220 Uncharacterized protein Ricinus communis
TI:3988 None 		 
 
B9RGX4_RICCO
euHCVdb»
0.0
RCOM_1445090 U5 small nuclear ribonucleoprotein TSSC4 Ricinus communis
TI:3988 None
 
A0A1B6PKG0_SORBI
euHCVdb»
0.0
SORBI_3006G058300 U5 small nuclear ribonucleoprotein TSSC4 Sorghum bicolor
TI:4558 None
 
Q9LYU5_ARATH
TAIR»
1.0
T31B5_130 Uncharacterized protein At5g13310
(Uncharacterized protein T31B5_130)		 Arabidopsis thaliana
TI:3702 None
 
A0A2G3AB60_CAPAN
euHCVdb»
0.0
T459_06554 U5 small nuclear ribonucleoprotein TSSC4 Capsicum annuum
TI:4072 None
 
A0A1U8F2B8_CAPAN
neXtProt»
0.0
T459_14657 Uncharacterized protein Capsicum annuum
TI:4072 None
 
A0A061E3U7_THECC
neXtProt»
0.0
TCM_008351 Uncharacterized protein Theobroma cacao
TI:3641 None
 
A0A061EE81_THECC
euHCVdb»
0.0
TCM_017346 U5 small nuclear ribonucleoprotein TSSC4 Theobroma cacao
TI:3641 None
 
A0A287A8Y0_PIG
Ensembl»
0.0
TSSC4 U5 small nuclear ribonucleoprotein TSSC4 Sus scrofa
TI:9823 None
   
A0A8I3NUR1_CANLF
Ensembl»
0.0
TSSC4 U5 small nuclear ribonucleoprotein TSSC4 Canis lupus
TI:9612 None
   
A0A8V0ZR81_CHICK
Ensembl»
1.0
TSSC4 U5 small nuclear ribonucleoprotein TSSC4 Gallus gallus
TI:9031 None
   
A0ABI7W6D8_FELCA
Ensembl»
0.0
TSSC4 U5 small nuclear ribonucleoprotein TSSC4 Felis catus
TI:9685 None
   
F6Q7U7_MACMU
Ensembl»
0.0
TSSC4 U5 small nuclear ribonucleoprotein TSSC4 Macaca mulatta
TI:9544 None
   
G1KB35_ANOCA
Ensembl»
0.0
TSSC4 U5 small nuclear ribonucleoprotein TSSC4 Anolis carolinensis
TI:28377 None
   
G3QX83_GORGO
Ensembl»
0.0
TSSC4 U5 small nuclear ribonucleoprotein TSSC4 Gorilla gorilla
TI:9593 None
 
H2Q2X0_PANTR
Ensembl»
0.0
TSSC4 U5 small nuclear ribonucleoprotein TSSC4 Pan troglodytes
TI:9598 None
 
TSSC4_BOVIN
Ensembl»
0.0
TSSC4 U5 small nuclear ribonucleoprotein TSSC4 Bos taurus
TI:9913 None
 
TSSC4_HUMAN
Ensembl»
4.2
TSSC4 U5 small nuclear ribonucleoprotein TSSC4 (Tumor-suppressing STF cDNA 4
protein) (Tumor-suppressing subchromosomal transferable fragment candidate gene 4 protein)		 Homo sapiens
TI:9606 None
 
TSSC4_MOUSE
Ensembl»
4.5
Tssc4 U5 small nuclear ribonucleoprotein TSSC4 Mus musculus
TI:10090 None
 
TSSC4_RAT
RGD»
4.5
Tssc4 U5 small nuclear ribonucleoprotein TSSC4 Rattus norvegicus
TI:10116 None
 
D7TFH9_VITVI
euHCVdb»
0.0
VIT_01s0150g00040 Uncharacterized protein Vitis vinifera
TI:29760 None
 
F6H429_VITVI
euHCVdb»
0.0
VIT_14s0068g01100 U5 small nuclear ribonucleoprotein TSSC4 Vitis vinifera
TI:29760 None
 
A0A0K9PDB6_ZOSMR
euHCVdb»
0.0
ZOSMA_27G00210 U5 small nuclear ribonucleoprotein TSSC4 Zostera marina
TI:29655 None
 
A0A803KIR9_XENTR
Xenbase»
0.0
tssc4 U5 small nuclear ribonucleoprotein TSSC4 Xenopus tropicalis
TI:8364 None
   
TSSC4_DANRE
ZFIN»
2.5
tssc4 U5 small nuclear ribonucleoprotein TSSC4 Danio rerio
TI:7955 None