Collated Gene Ontology terms

Biological process: RNA binding(2007, 2024) nucleic acid binding(2024)

Molecular function: mRNA cis splicing, via spliceosome2014, 2024 mRNA processing2024 RNA splicing2024 mRNA splicing, via spliceosome2010, 2020 regulation of RNA splicing2016, 2024 alternative mRNA splicing, via spliceosome2014, 2020, 2024 DNA repair2008, 2024 regulation of alternative mRNA splicing, via spliceosome2008 compound eye morphogenesis2013 RNA splicing, via transesterification reactions2005

Cellular component: chloroplast2003, 2024 cytoplasm2021, 2024 nucleus2009, 2016, 2021, 2024 nucleoplasm2016, 2023, 2024 spliceosomal complex2024 protein-containing complex2018, 2024 precatalytic spliceosome2010, 2024 cytosol2009

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 9/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 4/4 
Hacrobia: 0/0 
Plants: 36/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
DR111_ARATH
TAIR»
0.8
DRT111 DNA-damage-repair/toleration protein DRT111, chloroplastic
(REQUIRED FOR SNC4-1D protein 2)		 Arabidopsis thaliana
TI:3702 None
 
Q7PL83_DROME
FlyBase»
3.9
Spf45 Splicing factor 45
(RNA-binding motif protein 17)		 Drosophila melanogaster
TI:7227 None
 
SPF45_HUMAN
Ensembl»
1.3
RBM17 Splicing factor 45 (45 kDa-splicing
factor) (RNA-binding motif protein 17)		 Homo sapiens
TI:9606 None
 
SPF45_MOUSE
Ensembl»
1.4
Rbm17 Splicing factor 45 (45 kDa-splicing
factor) (RNA-binding motif protein 17)		 Mus musculus
TI:10090 None
 
Q20966_CAEEL
WormBase»
0.5
rbm-17 Splicing factor 45
(RNA-binding motif protein 17)		 Caenorhabditis elegans
TI:6239 None
 
Q55BL6_DICDI
dictyBase»
0.5
DDB_G0270450 RNA-binding region
RNP-1 domain-containing protein		 Dictyostelium discoideum
TI:44689 None
 
Q6AY02_RAT
RGD»
1.0
Rbm17 Splicing factor 45
(RNA-binding motif protein 17)		 Rattus norvegicus
TI:10116 None
 
YAB4_SCHPO
PomBase»
1.0
SPAC2G11.04 Uncharacterized protein C2G11.04 Schizosaccharomyces pombe
TI:4896 None
 
A0A8M2BC07_DANRE
CTD»
0.5
rbm17 Splicing factor 45
(RNA-binding motif protein 17)		 Danio rerio
TI:7955 None
   
A0A8V0XUL9_CHICK
Ensembl»
0.0
RBM17 Splicing factor 45
(RNA-binding motif protein 17)		 Gallus gallus
TI:9031 None