Collated Gene Ontology terms

Biological process: RNA binding(2010, 2014, 2017, 2024) ribosome binding(2009, 2024) ribosomal small subunit binding(2014) exon-exon junction complex binding(2014) eukaryotic initiation factor 4G binding(2014) eukaryotic initiation factor 4E binding(2014)

Molecular function: exon-exon junction complex disassembly2014, 2015, 2017, 2024 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay2009, 2017, 2024 positive regulation of translation2009, 2024 regulation of translation2024 positive regulation of gene expression2012, 2024 mRNA transport2024 cap-dependent translational initiation2014

Cellular component: cytoplasm2008, 2010, 2013, 2022, 2024 exon-exon junction complex2009, 2017, 2024 nucleoplasm2008, 2023, 2024 nucleolus2008, 2023, 2024 nucleus2024 cytosol2009, 2023, 2024 cell junction2023, 2024 nuclear periphery2013

Phylogenetic distribution

Chordates: 19/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 0/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 4/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 10/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 1/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
PYM1_ARATH
TAIR»
0.8
PYM Partner of Y14 and mago (AtPYM) Arabidopsis thaliana
TI:3702 None
 
Q22615_CAEEL
WormBase»
1.0
CELE_T20G5.9 T20G5.9 Partner of Y14 and mago Caenorhabditis elegans
TI:6239 None
 
PYM1_DANRE
ZFIN»
2.5
pym1 Partner of Y14 and mago (PYM homolog
1 exon junction complex-associated factor) (Protein wibg homolog)		 Danio rerio
TI:7955 None
 
Q54R88_DICDI
dictyBase»
1.0
DDB_G0283313 RmlC-like cupin family protein Dictyostelium discoideum
TI:44689 None
 
PYM_DROME
FlyBase»
7.9
Pym Partner of Y14 and mago (DmPYM)
(Protein within the bgcn gene intron)		 Drosophila melanogaster
TI:7227 None
 
A0A8V1A3N8_CHICK
Ensembl»
0.0
PYM homolog 1, exon
junction complex associated factor		 Gallus gallus
TI:9031 None
   
PYM1_HUMAN
Ensembl»
4.7
PYM1 Partner of Y14 and mago (PYM homolog
1 exon junction complex-associated factor) (Protein wibg homolog)		 Homo sapiens
TI:9606 None
 
PYM1_MOUSE
Ensembl»
1.5
Pym1 Partner of Y14 and mago (PYM homolog
1 exon junction complex-associated factor) (Protein wibg homolog)		 Mus musculus
TI:10090 None
 
A0A8I6GKW1_RAT
RGD»
3.0
Pym1 PYM homolog 1, exon
junction complex associated factor		 Rattus norvegicus
TI:10116 None
   
YHY1_SCHPO
PomBase»
1.5
SPBC19C7.01 SPBC32F12.13c Uncharacterized protein C19C7.01 Schizosaccharomyces pombe
TI:4896 None