Collated Gene Ontology terms

Biological process: RNA binding(2010, 2014, 2017, 2024) ribosome binding(2009, 2024) ribosomal small subunit binding(2014) exon-exon junction complex binding(2014) eukaryotic initiation factor 4G binding(2014) eukaryotic initiation factor 4E binding(2014)

Molecular function: exon-exon junction complex disassembly2014, 2015, 2017, 2024 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay2009, 2017, 2024 positive regulation of translation2009, 2024 regulation of translation2024 positive regulation of gene expression2012, 2024 mRNA transport2024 cap-dependent translational initiation2014

Cellular component: cytoplasm2008, 2010, 2013, 2022, 2024 exon-exon junction complex2009, 2017, 2024 nucleoplasm2008, 2023, 2024 nucleolus2008, 2023, 2024 nucleus2024 cytosol2009, 2023, 2024 cell junction2023, 2024 nuclear periphery2013

Phylogenetic distribution

Chordates: 19/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 0/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 4/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 10/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 1/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
A0A078G6D5_BRANA
EnsemblPlants»
0.0
BnaA08g25310D (rape) hypothetical
protein (BnaA08g25310D protein)		 Brassica napus
TI:3708 None
 
A0A078J1G1_BRANA
EnsemblPlants»
0.0
BnaC08g14910D (rape) hypothetical
protein (BnaC08g14910D protein)		 Brassica napus
TI:3708 None
 
A0A078GRI2_BRANA
EnsemblPlants»
0.0
BnaA09g35440D BnaA09g35440D protein Brassica napus
TI:3708 None
 
A0A078G3S9_BRANA
EnsemblPlants»
0.0
BnaC05g08720D BnaC05g08720D protein Brassica napus
TI:3708 None
 
A2Q490_MEDTR
EnsemblPlants»
0.0
11423581 ENSANGP00000004563, related (Partner of Y14-mago
protein, putative) (Putative WIBG family protein)		 Medicago truncatula
TI:3880 None
 
Q5KNR1_CRYNJ
EnsemblFungi»
0.0
CNA05620 Expressed protein Cryptococcus neoformans
TI:5207 None
 
Q10NR2_ORYSJ
EnsemblPlants»
0.0
LOC_Os03g15560 Os03g0262100 Expressed protein (Os03g0262100 protein) Oryza sativa
TI:4530 None
 
B6K063_SCHJY
EnsemblFungi»
0.0
SJAG_01252 Mago binding protein Schizosaccharomyces japonicus
TI:4897 None
 
Q8I5V8_PLAF7
EnsemblProtists»
0.0
PF3D7_1209000 Mago-binding protein, putative Plasmodium falciparum
TI:5833 None
 
A0A287B9S4_PIG
Ensembl»
0.0
PYM1 PYM homolog 1, exon
junction complex associated factor		 Sus scrofa
TI:9823 None
   
A0A2I2YZ99_GORGO
Ensembl»
0.0
PYM1 PYM homolog 1, exon
junction complex associated factor		 Gorilla gorilla
TI:9593 None
 
A0A2I3ST03_PANTR
Ensembl»
0.0
PYM1 PYM homolog 1, exon
junction complex associated factor		 Pan troglodytes
TI:9598 None
 
A0A3B3HNT0_ORYLA
Ensembl»
0.0
pym1 PYM homolog 1, exon
junction complex associated factor		 Oryzias latipes
TI:8090 None
   
A0A6I8P967_ORNAN
Ensembl»
0.0
PYM1 PYM homolog 1, exon
junction complex associated factor		 Ornithorhynchus anatinus
TI:9258 None
   
A0A8I3NC42_CANLF
Ensembl»
0.0
PYM1 PYM homolog 1, exon
junction complex associated factor		 Canis lupus
TI:9612 None
   
A0A8I6GKW1_RAT
RGD»
3.0
Pym1 PYM homolog 1, exon
junction complex associated factor		 Rattus norvegicus
TI:10116 None
   
A0A8V1A3N8_CHICK
Ensembl»
0.0
PYM homolog 1, exon
junction complex associated factor		 Gallus gallus
TI:9031 None
   
H9GAH4_ANOCA
Ensembl»
0.0
PYM1 PYM homolog 1, exon
junction complex associated factor		 Anolis carolinensis
TI:28377 None
   
M3WJU1_FELCA
Ensembl»
0.0
PYM1 PYM homolog 1, exon
junction complex associated factor		 Felis catus
TI:9685 None
 
F7GQZ0_MACMU
Ensembl»
0.0
PYM1 PYM homolog 1, exon junction complex associated
factor (Partner of Y14 and mago isoform 2)		 Macaca mulatta
TI:9544 None
 
B6TLX6_MAIZE
EnsemblPlants»
0.0
100283795 PYM protein Zea mays
TI:4577 None
 
A0A0K9NLH0_ZOSMR
EnsemblPlants»
0.0
ZOSMA_84G00340 Partner of Y14 and mago Zostera marina
TI:29655 None
 
A0A1L8H9P5_XENLA
Xenbase»
0.0
pym1.S Partner of Y14 and mago Xenopus laevis
TI:8355 None
   
A0A1S4BGF4_TOBAC
EnsemblFungi»
0.0
LOC107807981 Partner of Y14 and mago Nicotiana tabacum
TI:4097 None
   
A0A8R1Z4I1_PRIPA
EnsemblMetazoa»
0.0
WBGene00304951 Partner of Y14 and mago Pristionchus pacificus
TI:54126 None
   
A8X9P3_CAEBR
WormBase»
0.0
CBG09807 CBG_09807 Partner of Y14 and mago Caenorhabditis briggsae
TI:6238 None
 
D6WV11_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_05977 Partner of Y14 and mago Tribolium castaneum
TI:7070 None
 
E9FYZ9_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_43105 Partner of Y14 and mago Daphnia pulex
TI:6669 None
 
Q22615_CAEEL
WormBase»
1.0
CELE_T20G5.9 T20G5.9 Partner of Y14 and mago Caenorhabditis elegans
TI:6239 None
 
PYM1_ARATH
TAIR»
0.8
PYM Partner of Y14 and mago (AtPYM) Arabidopsis thaliana
TI:3702 None
 
PYM_DROME
FlyBase»
7.9
Pym Partner of Y14 and mago (DmPYM)
(Protein within the bgcn gene intron)		 Drosophila melanogaster
TI:7227 None
 
PYM1_BOVIN
Ensembl»
0.0
PYM1 Partner of Y14 and mago (PYM homolog
1 exon junction complex-associated factor) (Protein wibg homolog)		 Bos taurus
TI:9913 None
 
PYM1_DANRE
ZFIN»
2.5
pym1 Partner of Y14 and mago (PYM homolog
1 exon junction complex-associated factor) (Protein wibg homolog)		 Danio rerio
TI:7955 None
 
PYM1_HUMAN
Ensembl»
4.7
PYM1 Partner of Y14 and mago (PYM homolog
1 exon junction complex-associated factor) (Protein wibg homolog)		 Homo sapiens
TI:9606 None
 
PYM1_MOUSE
Ensembl»
1.5
Pym1 Partner of Y14 and mago (PYM homolog
1 exon junction complex-associated factor) (Protein wibg homolog)		 Mus musculus
TI:10090 None
 
PYM1_XENLA
Xenbase»
0.0
pym1 Partner of Y14 and mago (PYM homolog
1 exon junction complex-associated factor) (Protein wibg homolog)		 Xenopus laevis
TI:8355 None
 
PYM1_XENTR
Xenbase»
0.0
pym1 Partner of Y14 and mago (PYM homolog
1 exon junction complex-associated factor) (Protein wibg homolog)		 Xenopus tropicalis
TI:8364 None
 
PYM_ANOGA
CTD»
0.0
Pym Partner of Y14 and mago (Protein wibg homolog) Anopheles gambiae
TI:7165 None
 
A0A1S3Y8W0_TOBAC
EnsemblFungi»
0.0
LOC107773864 Partner of Y14 and mago-like Nicotiana tabacum
TI:4097 None
   
A0A1U7ZG10_NELNU
EnsemblBacteria»
0.0
LOC104589756 Partner of Y14 and mago-like Nelumbo nucifera
TI:4432 None
   
A0A1U8JM09_GOSHI
Ensembl»
0.0
LOC107908599 Partner of Y14 and mago-like Gossypium hirsutum
TI:3635 None
   
A0A1U8KVR0_GOSHI
Ensembl»
0.0
LOC107921171 Partner of Y14 and mago-like Gossypium hirsutum
TI:3635 None
   
A0A1U8LA91_GOSHI
Ensembl»
0.0
LOC107925364 Partner of Y14 and mago-like Gossypium hirsutum
TI:3635 None
   
A0A2I4GDZ7_JUGRE
EnsemblPlants»
0.0
LOC109007049 Partner of Y14 and mago-like Juglans regia
TI:51240 None
 
A0A2I4H4I4_JUGRE
EnsemblPlants»
0.0
LOC109013417 Partner of Y14 and mago-like Juglans regia
TI:51240 None
   
A0A1U7ZDA4_NELNU
EnsemblBacteria»
0.0
LOC104589326 Partner of Y14 and mago-like isoform X1 Nelumbo nucifera
TI:4432 None
   
A0A9J7LSH9_BRAFL
CTD»
0.0
LOC118424082 Partner of Y14 and mago-like isoform X1 Branchiostoma floridae
TI:7739 None
   
B4FUX7_MAIZE
EnsemblPlants»
0.0
100273358 Partner of Y14-MAGO Zea mays
TI:4577 None
 
A0A061DXF2_THECC
EnsemblPlants»
0.0
TCM_006420 Partner of Y14-MAGO isoform 1 Theobroma cacao
TI:3641 None
 
M1C728_SOLTU
EnsemblPlants»
0.0
102592344 Partner of Y14-mago Solanum tuberosum
TI:4113 None
   
A0A251V5F2_HELAN
EnsemblPlants»
0.0
PYM Putative partner of Y14-MAGO
(WIBG, Mago-binding, WIBG domain superfamily)		 Helianthus annuus
TI:4232 None
 
A0A1Y1HLK7_KLENI
EnsemblPlants»
0.0
KFL_000140630 Pym super family protein Klebsormidium nitens
TI:105231 None
 
Q5B6A9_EMENI
EnsemblFungi»
0.0
ANIA_03921 RNA binding protein
Pym, putative (AFU_orthologue AFUA_6G08430)		 Emericella nidulans
TI:162425 None
 
Q7SGT8_NEUCR
EnsemblFungi»
0.0
NCU03232 RNA binding protein Pym Neurospora crassa
TI:5141 None
 
Q4WMX0_ASPFU
EnsemblFungi»
0.0
AFUA_6G08430 RNA binding protein Pym, putative Aspergillus fumigatus
TI:746128 None
 
Q54R88_DICDI
dictyBase»
1.0
DDB_G0283313 RmlC-like cupin family protein Dictyostelium discoideum
TI:44689 None
 
A0A0A0KQG4_CUCSA
EnsemblPlants»
0.0
Csa_5G453710 Uncharacterized protein Cucumis sativus
TI:3659 None
 
D7U780_VITVI
EnsemblPlants»
0.0
VIT_16s0013g00930 Uncharacterized protein Vitis vinifera
TI:29760 None
 
K4AGL5_SETIT
EnsemblPlants»
0.0
Uncharacterized protein Setaria italica
TI:4555 None
 
YHY1_SCHPO
PomBase»
1.5
SPBC19C7.01 SPBC32F12.13c Uncharacterized protein C19C7.01 Schizosaccharomyces pombe
TI:4896 None
 
A0A067DSC8_CITSI
Ensembl»
0.0
CISIN_1g0266391mg WHEP-TRS domain-containing protein Citrus sinensis
TI:2711 None
 
A0A022PS04_ERYGU
EnsemblFungi»
0.0
MIMGU_mgv1a013377mg WIBG Mago-binding domain-containing protein Erythranthe guttata
TI:4155 None
 
A0A067DEU0_CITSI
Ensembl»
0.0
CISIN_1g0266392mg WIBG Mago-binding domain-containing protein Citrus sinensis
TI:2711 None
 
A0A0A0K274_CUCSA
EnsemblPlants»
0.0
Csa_7G066320 WIBG Mago-binding domain-containing protein Cucumis sativus
TI:3659 None
 
A0A0A0KNF4_CUCSA
EnsemblPlants»
0.0
Csa_5G453700 WIBG Mago-binding domain-containing protein Cucumis sativus
TI:3659 None
 
A0A0R0K4W3_SOYBN
EnsemblPlants»
0.0
100820219 WIBG Mago-binding domain-containing protein Glycine max
TI:3847 None
 
A0A1U8DVV5_CAPAN
EnsemblPlants»
0.0
T459_33872 WIBG Mago-binding domain-containing protein Capsicum annuum
TI:4072 None
 
A0A1Z5SAD0_SORBI
EnsemblPlants»
0.0
SORBI_3001G429400 WIBG Mago-binding domain-containing protein Sorghum bicolor
TI:4558 None
 
A0A251RIZ5_PRUPE
EnsemblPlants»
0.0
PRUPE_1G562800 WIBG Mago-binding domain-containing protein Prunus persica
TI:3760 None
 
A0A2C9V5Q4_MANES
EnsemblPlants»
0.0
MANES_10G132000 WIBG Mago-binding domain-containing protein Manihot esculenta
TI:3983 None
 
A0A2C9VHL4_MANES
EnsemblPlants»
0.0
MANES_07G013800 WIBG Mago-binding domain-containing protein Manihot esculenta
TI:3983 None
 
A0A2K1KQ39_PHYPA
EnsemblPlants»
0.0
PHYPA_006801 WIBG Mago-binding domain-containing protein Physcomitrium patens
TI:3218 None
 
A0A2K2B0A6_POPTR
EnsemblPlants»
0.0
POPTR_003G021500 WIBG Mago-binding domain-containing protein Populus trichocarpa
TI:3694 None
 
A0A2K2C150_POPTR
EnsemblPlants»
0.0
POPTR_001G209100 WIBG Mago-binding domain-containing protein Populus trichocarpa
TI:3694 None
 
A0A2K2DTT8_BRADI
EnsemblPlants»
0.0
100837845 WIBG Mago-binding domain-containing protein Brachypodium distachyon
TI:15368 None
 
A0A2R6WQX0_MARPO
EnsemblPlants»
0.0
MARPO_0065s0027 WIBG Mago-binding domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A397YVA3_BRACM
EnsemblPlants»
0.0
BRARA_F00762 WIBG Mago-binding domain-containing protein Brassica campestris
TI:3711 None
 
A0A3B6HQ53_WHEAT
EnsemblPlants»
0.0
WIBG Mago-binding domain-containing protein Triticum aestivum
TI:4565 None
   
A0A3B6ISM1_WHEAT
EnsemblPlants»
0.0
CFC21_058138 WIBG Mago-binding domain-containing protein Triticum aestivum
TI:4565 None
 
A0A3B6JKP0_WHEAT
EnsemblPlants»
0.0
CFC21_041118 WIBG Mago-binding domain-containing protein Triticum aestivum
TI:4565 None
 
A0A3Q7EQR4_SOLLC
EnsemblPlants»
0.0
101261756 WIBG Mago-binding domain-containing protein Solanum lycopersicum
TI:4081 None
   
A0A7M7RH58_STRPU
EnsemblMetazoa»
0.0
WIBG Mago-binding domain-containing protein Strongylocentrotus purpuratus
TI:7668 None
   
A0A804L6V4_MUSAM
EnsemblPlants»
0.0
WIBG Mago-binding domain-containing protein Musa acuminata
TI:4641 None
   
A0A8I6Y871_HORVV
EnsemblPlants»
0.0
WIBG Mago-binding domain-containing protein Hordeum vulgare
TI:4513 None
   
A5BFF8_VITVI
EnsemblPlants»
0.0
VIT_12s0034g01010 WIBG Mago-binding domain-containing protein Vitis vinifera
TI:29760 None
 
A7F6R0_SCLS1
VEuPathDB»
0.0
SS1G_13289 WIBG Mago-binding domain-containing protein Sclerotinia sclerotiorum
TI:5180 None
 
A7SX96_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g136497 WIBG Mago-binding domain-containing protein Nematostella vectensis
TI:45351 None
 
A8J1Y0_CHLRE
EnsemblPlants»
0.0
CHLRE_06g279250v5 WIBG Mago-binding domain-containing protein Chlamydomonas reinhardtii
TI:3055 None
 
A9UZU7_MONBE
EnsemblProtists»
0.0
MONBRDRAFT_8361 WIBG Mago-binding domain-containing protein Monosiga brevicollis
TI:81824 None
 
B3RQS8_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_22941 WIBG Mago-binding domain-containing protein Trichoplax adhaerens
TI:10228 None
 
B3RQT6_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_22285 WIBG Mago-binding domain-containing protein Trichoplax adhaerens
TI:10228 None
 
B9SRJ9_RICCO
EnsemblBacteria»
0.0
RCOM_1411970 WIBG Mago-binding domain-containing protein Ricinus communis
TI:3988 None
 
D8QN86_SELML
EnsemblPlants»
0.0
SELMODRAFT_74160 SELMODRAFT_87032 WIBG Mago-binding domain-containing protein Selaginella moellendorffii
TI:88036 None
 
E3KUB3_PUCGT
EnsemblFungi»
0.0
PGTG_14603 WIBG Mago-binding domain-containing protein Puccinia graminis
TI:5297 None
 
F0ZH64_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_91792 WIBG Mago-binding domain-containing protein Dictyostelium purpureum
TI:5786 None
 
F6QKM5_CIOIN
Ensembl»
0.0
WIBG Mago-binding domain-containing protein Ciona intestinalis
TI:7719 None
 
I1KSS4_SOYBN
EnsemblPlants»
0.0
100791525 WIBG Mago-binding domain-containing protein Glycine max
TI:3847 None
 
M4DK09_BRACM
EnsemblPlants»
0.0
BRARA_H02713 WIBG Mago-binding domain-containing protein Brassica campestris
TI:3711 None
 
W1NIJ8_AMBTC
EnsemblPlants»
0.0
AMTR_s00008p00071380 WIBG Mago-binding domain-containing protein Amborella trichopoda
TI:13333 None
 
Q6CG22_YARLI
EnsemblFungi»
0.0
YALI0_B01562g YALI0B01562p Yarrowia lipolytica
TI:4952 None