Collated Gene Ontology terms

Biological process: chromatin binding(2017, 2022, 2024) histone H3K4 methyltransferase activity(2013, 2024) transferase activity(2024) myosin heavy chain kinase activity(2024) actin binding(2024)

Molecular function: DNA-templated transcription termination2024 nuclear RNA surveillance2022, 2024 negative regulation of DNA-templated transcription, elongation2022, 2024 negative regulation of lncRNA transcription2022, 2024 lncRNA catabolic process2022, 2024 regulation of timing of transition from vegetative to reproductive phase2016, 2024 regulation of long-day photoperiodism, flowering2017, 2024 plant-type cell wall modification2016, 2024 telomere maintenance2013, 2024 sno(s)RNA 3'-end processing2013, 2024
mRNA 3'-end processing2013, 2024 transcription initiation-coupled chromatin remodeling2015, 2022 regulation of siRNA-independent facultative heterochromatin formation2019, 2024 regulation of pericentric heterochromatin formation2023, 2024 programmed cell death2021, 2024 intraciliary transport involved in cilium assembly2024 chromatin remodeling2024 translation2021 termination of RNA polymerase II transcription, poly(A)-coupled2018 termination of RNA polymerase II transcription2020 subtelomeric heterochromatin formation2022 sorocarp development2008 mRNA processing2024 flower development2024 co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway2023

Cellular component: nucleus2009, 2012, 2016, 2022, 2024 Set1C/COMPASS complex2004, 2010, 2012, 2021, 2022, 2023, 2024 chromatin2004, 2010, 2014, 2024 histone methyltransferase complex2009, 2012, 2024 chromosome, telomeric region2016, 2024 PTW/PP1 phosphatase complex2010, 2024 nucleolus2023, 2024 cytoplasm2016, 2024 chromosome2024 mRNA cleavage and polyadenylation specificity factor complex2005, 2013, 2014, 2018, 2024
membrane2024 cytosol2009 ciliary tip2024 ciliary pocket collar2024 ciliary basal body2024 DPS complex2014, 2024 Cul4-RING E3 ubiquitin ligase complex2008 9+2 motile cilium2024 nucleoplasm2022 mitochondrion2014

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 14/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 3/3 
Excavates: 3/4 
Harosa: 4/4 
Hacrobia: 0/0 
Plants: 34/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
A0A8I6ADL8_RAT
RGD»
0.0
ENSRNOG00000063939 Uncharacterized protein Rattus norvegicus
TI:10116 None
   
A0A8V1A4E6_CHICK
Ensembl»
0.0
WDR82 WD repeat domain 82 Gallus gallus
TI:9031 None
   
APRF1_ARATH
TAIR»
1.6
APRF1 Protein ANTHESIS POMOTING FACTOR 1 Arabidopsis thaliana
TI:3702 None
 
M0R565_RAT
RGD»
3.0
Wdr82 WD repeat domain 82 Rattus norvegicus
TI:10116 None
   
Q18403_CAEEL
WormBase»
1.3
swd-2.2 WD_REPEATS_REGION domain-containing protein Caenorhabditis elegans
TI:6239 None
 
Q18404_CAEEL
WormBase»
0.5
swd-2.1 WD_REPEATS_REGION domain-containing protein Caenorhabditis elegans
TI:6239 None
 
Q54XN8_DICDI
dictyBase»
1.8
DDB_G0278945 Anaphase-promoting complex subunit
4-like WD40 domain-containing protein		 Dictyostelium discoideum
TI:44689 None
 
Q8RXD8_ARATH
TAIR»
0.8
ULCS1 Transducin/WD40 repeat-like superfamily
protein (WD repeat protein-like)		 Arabidopsis thaliana
TI:3702 None
 
Q9VQD1_DROME
FlyBase»
0.5
Dmel\CG3515 FI19335p1 Drosophila melanogaster
TI:7227 None
 
SWD2_SCHPO
PomBase»
1.5
swd2 Set1 complex component swd2 (Set1C component swd2) (COMPASS
component swd2) (Complex proteins associated with set1 protein swd2)		 Schizosaccharomyces pombe
TI:4896 None
 
SWD2_YEAST
SGD»
4.9
SWD2 COMPASS component SWD2 (Complex proteins associated
with SET1 protein SWD2) (Set1C component SWD2)		 Saccharomyces cerevisiae
TI:4932 None
 
WDR82_CHICK
CTD»
2.5
WDR82 WD repeat-containing protein 82 Gallus gallus
TI:9031 None
 
WDR82_DANRE
ZFIN»
2.5
wdr82 WD repeat-containing protein 82
(Protein word of mouth)		 Danio rerio
TI:7955 None
 
WDR82_DROME
FlyBase»
2.1
Wdr82 WD repeat-containing protein 82 Drosophila melanogaster
TI:7227 None
 
WDR82_HUMAN
Ensembl»
3.7
WDR82 WD repeat-containing protein 82 Homo sapiens
TI:9606 None
 
WDR82_MOUSE
Ensembl»
4.0
Wdr82 WD repeat-containing protein 82 Mus musculus
TI:10090 None
 
YIQ4_SCHPO
PomBase»
3.1
SPAC824.04 Uncharacterized WD
repeat-containing protein C824.04		 Schizosaccharomyces pombe
TI:4896 None