Collated Gene Ontology terms

Biological process: U5 snRNA binding(2022, 2024) RNA binding(2024)

Molecular function: mRNA splicing, via spliceosome2023, 2024 response to high fluence blue light stimulus by blue high-fluence system2016, 2024 regulation of photomorphogenesis2016, 2024 primary root development2016, 2024 negative regulation of ubiquitin protein ligase activity2016, 2024 mRNA cis splicing, via spliceosome2022, 2023, 2024 regulation of homologous chromosome segregation2022, 2024 mRNA processing2024 RNA splicing2024 chromosome segregation2024
alternative mRNA splicing, via spliceosome2024

Cellular component: nucleus2009, 2022, 2024 spliceosomal complex2014, 2018, 2024 nuclear speck2016, 2024 nucleoplasm2015, 2022, 2023, 2024 chromosome, centromeric region2022, 2024 cytosol2009, 2023, 2024 chromosome2024 membrane2024 cytoplasm2024

Phylogenetic distribution

Chordates: 19/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 8/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 1/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
H2QY12_PANTR
Ensembl»
0.0
C9H9orf78 Chromosome 9 C9orf78 homolog (Chromosome
9 open reading frame 78)		 Pan troglodytes
TI:9598 None
 
F1RQE0_PIG
Ensembl»
0.0
C1H9orf78 Chromosome 1 C9orf78 homolog (Telomere length and
silencing protein 1 homolog) (Uncharacterized protein C9orf78 homolog)		 Sus scrofa
TI:9823 None
 
TLS1_HUMAN
Ensembl»
2.9
C9orf78 Splicing factor C9orf78
(Hepatocellular carcinoma-associated antigen 59)		 Homo sapiens
TI:9606 None
 
TLS1_MOUSE
Ensembl»
0.0
Splicing factor C9orf78 homolog Mus musculus
TI:10090 None
 
CSU2_ARATH
TAIR»
3.2
CSU2 Protein COP1 SUPPRESSOR 2 Arabidopsis thaliana
TI:3702 None
 
Q7Y163_ORYSJ
EnsemblPlants»
0.0
LOC_Os03g25720 Os03g0374100 Hepatocellular carcinoma-associated antigen 59 family protein, expressed (Os03g0374100 protein)
(cDNA clone:001-042-H03, full insert sequence) (cDNA clone:J033011M11, full insert sequence)		 Oryza sativa
TI:4530 None
 
A0A397XPU8_BRACM
EnsemblPlants»
0.0
BRAA10T42384Z BRAPAZ1V2_A10P01120.2 BRARA_J00094 Protein COP1 SUPPRESSOR 2 Brassica campestris
TI:3711 None
 
B4FSC7_MAIZE
EnsemblPlants»
0.0
100282469 Hepatocellular carcinoma-associated antigen
59 family protein		 Zea mays
TI:4577 None
 
B7P7C6_IXOSC
EnsemblMetazoa»
0.0
IscW_ISCW001649 Telomere length and silencing protein 1 homolog Ixodes scapularis
TI:6945 None
 
B9I987_POPTR
EnsemblPlants»
0.0
POPTR_014G110200 Hepatocellular carcinoma-associated antigen
59 family protein		 Populus trichocarpa
TI:3694 None
 
Q5XJ46_DANRE
ZFIN»
0.5
DKEY-226M8.1 Novel protein (Zgc:103692) (Uncharacterized
protein C9orf78 homolog) (Zgc:103692)		 Danio rerio
TI:7955 None
 
Q9W0A9_DROME
FlyBase»
0.5
Dmel\CG7974 GM02612p (Uncharacterized protein, isoform
A) (Uncharacterized protein, isoform B)		 Drosophila melanogaster
TI:7227 None
 
A0A072VMT1_MEDTR
EnsemblPlants»
0.0
25484718 Hepatocellular carcinoma-associated antigen 59
(Putative hepatocellular carcinoma-associated antigen 59)		 Medicago truncatula
TI:3880 None
 
A0A078FLB2_BRANA
EnsemblPlants»
0.0
BnaC05g01090D (rape) hypothetical
protein (BnaC05g01090D protein)		 Brassica napus
TI:3708 None
 
A0A251VPQ7_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr01g0017841 HanXRQr2_Chr01g0029361 Telomere length and silencing protein Helianthus annuus
TI:4232 None
 
C6TJK7_SOYBN
EnsemblPlants»
0.0
100812323 Protein COP1 SUPPRESSOR 2 Glycine max
TI:3847 None
 
D8QPB9_SELML
EnsemblPlants»
0.0
SELMODRAFT_119432 SELMODRAFT_75683 Uncharacterized protein Selaginella moellendorffii
TI:88036 None
 
E9FWZ6_DAPPU
EnsemblMetazoa»
0.0
EOG090X0F7F EOG090X0F7F Daphnia pulex
TI:6669 None
 
F2DRT5_HORVV
EnsemblPlants»
0.0
Predicted protein Hordeum vulgare
TI:4513 None
 
I1H536_BRADI
EnsemblPlants»
0.0
100821850 Hepatocellular carcinoma-associated antigen
59 family protein		 Brachypodium distachyon
TI:15368 None
 
M5XB50_PRUPE
EnsemblPlants»
0.0
PRUPE_3G000500 Hepatocellular carcinoma-associated antigen
59 domain-containing protein		 Prunus persica
TI:3760 None
 
T1FNR9_HELRO
EnsemblMetazoa»
0.0
20210466 Hepatocellular carcinoma-associated antigen
59 domain-containing protein		 Helobdella robusta
TI:6412 None
 
TLS1_SCHPO
PomBase»
2.1
tls1 Splicing factor tls1 (Telomere
length and silencing protein 1)		 Schizosaccharomyces pombe
TI:4896 None
 
A0A022S3Q0_ERYGU
EnsemblFungi»
0.0
MIMGU_mgv1a011516mg Hepatocellular carcinoma-associated antigen
59 domain-containing protein		 Erythranthe guttata
TI:4155 None
 
A0A061DZN7_THECC
EnsemblPlants»
0.0
TCM_004978 Hepatocellular carcinoma-associated antigen
59 family protein		 Theobroma cacao
TI:3641 None
 
A0A067H423_CITSI
Ensembl»
0.0
CISIN_1g023468mg Hepatocellular carcinoma-associated antigen
59 domain-containing protein		 Citrus sinensis
TI:2711 None
 
A0A0A0KLP5_CUCSA
EnsemblPlants»
0.0
Csa_5G129300 Hepatocellular carcinoma-associated antigen
59 family protein		 Cucumis sativus
TI:3659 None
 
A0A0K9PZ48_ZOSMR
EnsemblPlants»
0.0
ZOSMA_12G00270 Hepatocellular carcinoma-associated antigen
59 family protein,expressed		 Zostera marina
TI:29655 None
 
A0A1U7ZNQ0_NELNU
EnsemblBacteria»
0.0
LOC104592514 Uncharacterized protein C9orf78 homolog Nelumbo nucifera
TI:4432 None
 
A0A1U8DWJ4_CAPAN
EnsemblPlants»
0.0
T459_02650 Protein COP1 SUPPRESSOR 2 Capsicum annuum
TI:4072 None
 
A0A1Y1IFZ6_KLENI
EnsemblPlants»
0.0
KFL_003260110 Hepatocellular carcinoma-associated antigen
59 family protein		 Klebsormidium nitens
TI:105231 None
 
A0A251U0G8_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr09g0263751 Putative hepatocellular
carcinoma-associated antigen 59		 Helianthus annuus
TI:4232 None
 
A0A2C9UM93_MANES
EnsemblPlants»
0.0
MANES_14G164500 Hepatocellular carcinoma-associated antigen
59 domain-containing protein		 Manihot esculenta
TI:3983 None
 
A0A2I4GGU5_JUGRE
EnsemblPlants»
0.0
LOC109007758 Protein COP1 SUPPRESSOR 2 Juglans regia
TI:51240 None
 
A0A2K1KIK5_PHYPA
EnsemblPlants»
0.0
PHYPA_007286 Uncharacterized protein Physcomitrium patens
TI:3218 None
 
A0A2R6XJN5_MARPO
EnsemblPlants»
0.0
MARPO_0012s0210 Hepatocellular carcinoma-associated antigen
59 domain-containing protein		 Marchantia polymorpha
TI:3197 None
 
A0A3B6NX60_WHEAT
EnsemblPlants»
0.0
CFC21_085504 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A3B6PT20_WHEAT
EnsemblPlants»
0.0
CFC21_090400 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A3B6PUB6_WHEAT
EnsemblPlants»
0.0
CFC21_090402 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A3B6QLD4_WHEAT
EnsemblPlants»
0.0
CFC21_094745 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A804JWU8_MUSAM
EnsemblPlants»
0.0
103992061 (wild Malaysian banana) hypothetical protein Musa acuminata
TI:4641 None
 
A7F5I5_SCLS1
EnsemblFungi»
0.0
SS1G_12863 Uncharacterized protein Sclerotinia sclerotiorum
TI:5180 None
 
A7RMW7_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g160725 Telomere length and silencing protein 1 homolog Nematostella vectensis
TI:45351 None
 
A8ICG2_CHLRE
EnsemblPlants»
0.0
CHLRE_10g423350v5 Uncharacterized protein Chlamydomonas reinhardtii
TI:3055 None
 
A8WMN4_CAEBR
WormBase»
0.0
CBG00304 CBG_00304 Protein CBG00304 Caenorhabditis briggsae
TI:6238 None
 
A9RK59_PHYPA
EnsemblPlants»
0.0
PHYPA_009114 Uncharacterized protein Physcomitrium patens
TI:3218 None
 
A9UXL7_MONBE
EnsemblProtists»
0.0
MONBRDRAFT_25044 Uncharacterized protein Monosiga brevicollis
TI:81824 None
 
B3S591_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_50676 Hepatocellular carcinoma-associated antigen
59 domain-containing protein		 Trichoplax adhaerens
TI:10228 None
 
B9S044_RICCO
EnsemblBacteria»
0.0
RCOM_1297580 Protein C9orf78, putative Ricinus communis
TI:3988 None
 
C3ZCM5_BRAFL
CTD»
0.0
LOC118420686 Telomere length and silencing protein 1 homolog Branchiostoma floridae
TI:7739 None
 
C5WYN7_SORBI
EnsemblPlants»
0.0
SORBI_3001G358500 Uncharacterized protein Sorghum bicolor
TI:4558 None
 
C8VBB6_EMENI
EnsemblFungi»
0.0
ANIA_07442 Uncharacterized protein Emericella nidulans
TI:162425 None
 
D6WEK7_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_03173 Uncharacterized protein
C9orf78 homolog-like Protein		 Tribolium castaneum
TI:7070 None
 
E3KIP2_PUCGT
EnsemblFungi»
0.0
PGTG_10545 Hepatocellular carcinoma-associated antigen 59 Puccinia graminis
TI:5297 None
 
F0ZXC9_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_156758 Uncharacterized protein Dictyostelium purpureum
TI:5786 None
 
F4P7U6_BATDJ
EnsemblBacteria»
0.0
BATDEDRAFT_26637 Uncharacterized protein Batrachochytrium dendrobatidis
TI:109871 None
 
F6HZE7_VITVI
EnsemblPlants»
0.0
VIT_07s0005g02360 Protein COP1 suppressor 2 Vitis vinifera
TI:29760 None
 
F6WZL2_XENTR
Xenbase»
0.0
ints7 Chromosome 9 open reading frame
78 (Uncharacterized protein C9orf78 homolog)		 Xenopus tropicalis
TI:8364 None
 
F7ACY4_CIOIN
Ensembl»
0.0
Telomere length and silencing protein 1 homolog Ciona intestinalis
TI:7719 None
 
G3RC13_GORGO
Ensembl»
0.0
C9orf78 Chromosome 9 open reading frame 78 Gorilla gorilla
TI:9593 None
 
I1JB93_SOYBN
EnsemblPlants»
0.0
100798791 Protein COP1 SUPPRESSOR 2 Glycine max
TI:3847 None
 
K4AC00_SETIT
EnsemblPlants»
0.0
Uncharacterized protein Setaria italica
TI:4555 None
 
M3W2T1_FELCA
Ensembl»
0.0
CD4H9orf78 Chromosome D4 C9orf78 homolog Felis catus
TI:9685 None
 
Q55ER9_DICDI
dictyBase»
0.5
DDB_G0268774 Uncharacterized protein Dictyostelium discoideum
TI:44689 None
 
Q5KLY9_CRYNJ
EnsemblFungi»
0.0
CNB03570 Hepatocellular carcinoma-associated antigen 59 Cryptococcus neoformans
TI:5207 None
 
Q640Y5_XENLA
Xenbase»
0.0
c8h9orf78.L Chromosome 9 open reading frame
78 L homeolog (MGC84248 protein)		 Xenopus laevis
TI:8355 None
 
Q7Q562_ANOGA
EnsemblMetazoa»
0.0
1277206 AGAP006620-PA Anopheles gambiae
TI:7165 None
 
Q7SGB8_NEUCR
EnsemblFungi»
0.0
NCU02731 Uncharacterized protein Neurospora crassa
TI:5141 None
 
Q8IKF5_PLAF7
EnsemblProtists»
0.0
PF3D7_1468200 Telomere length and
silencing protein 1, putative		 Plasmodium falciparum
TI:5833 None
 
Q9XVH9_CAEEL
WormBase»
0.5
CELE_T23G11.4 T23G11.4 Hepatocellular carcinoma-associated antigen 59 Caenorhabditis elegans
TI:6239 None
 
W1P5I2_AMBTC
EnsemblPlants»
0.0
AMTR_s00045p00207500 Hepatocellular carcinoma-associated antigen
59 domain-containing protein		 Amborella trichopoda
TI:13333 None
 
W5M8W8_LEPOC
Ensembl»
0.0
C9orf78 Chromosome LG21 open
reading frame, human C9orf78		 Lepisosteus oculatus
TI:7918 None
 
A0A096MJX5_RAT
RGD»
2.0
C3h9orf78 Uncharacterized protein Rattus norvegicus
TI:10116 None
   
A0A1S3YRR1_TOBAC
EnsemblFungi»
0.0
LOC107778924 Uncharacterized protein C9orf78-like Nicotiana tabacum
TI:4097 None
   
A0A1S4BPV9_TOBAC
EnsemblFungi»
0.0
LOC107810621 Uncharacterized protein C9orf78-like Nicotiana tabacum
TI:4097 None
   
A0A1U8K5H8_GOSHI
Ensembl»
0.0
LOC107912287 Uncharacterized protein C9orf78 Gossypium hirsutum
TI:3635 None
   
A0A3B6NVL6_WHEAT
EnsemblPlants»
0.0
Uncharacterized protein Triticum aestivum
TI:4565 None
   
A0A3Q7F0G5_SOLLC
EnsemblPlants»
0.0
Protein COP1 SUPPRESSOR 2 Solanum lycopersicum
TI:4081 None
   
A0A5F8HCT9_MONDO
Ensembl»
0.0
Telomere length and silencing protein 1 homolog Monodelphis domestica
TI:13616 None
   
A0A6I8NC17_ORNAN
Ensembl»
0.0
C9orf78 Chromosome 9 open reading frame 78 Ornithorhynchus anatinus
TI:9258 None
   
A0A7M7PRD7_STRPU
EnsemblMetazoa»
0.0
Telomere length and silencing protein 1 homolog Strongylocentrotus purpuratus
TI:7668 None
   
A0A8I3PEF5_CANLF
Ensembl»
0.0
C9H9orf78 Chromosome 9 open reading frame 78 Canis lupus
TI:9612 None
   
A0A8I3RVI2_CANLF
Ensembl»
0.0
Uncharacterized protein Canis lupus
TI:9612 None
   
A0A8R1V2N1_PRIPA
EnsemblMetazoa»
0.0
WBGene00304613 Uncharacterized protein Pristionchus pacificus
TI:54126 None
   
F1P4D4_CHICK
Ensembl»
0.5
C9orf78 Chromosome 9 open reading frame 78 Gallus gallus
TI:9031 None
   
F6PG42_MONDO
Ensembl»
0.0
C9orf78 Chromosome 9 open reading frame 78 Monodelphis domestica
TI:13616 None
   
F7B164_HORSE
Ensembl»
0.0
C25H9orf78 Chromosome 25 C9orf78 homolog Equus caballus
TI:9796 None
   
H2M6V3_ORYLA
Ensembl»
0.0
C9orf78 Chromosome 9 C9orf78 homolog Oryzias latipes
TI:8090 None
   
M0ZJS3_SOLTU
EnsemblPlants»
0.0
Hepatocellular carcinoma-associated antigen
59 family protein		 Solanum tuberosum
TI:4113 None