Collated Gene Ontology terms

Biological process: RNA binding(2014, 2022, 2025) ubiquitin-like protein ligase binding(2023) sequence-specific DNA binding(2025) nuclear localization sequence binding(2022) nuclear import signal receptor activity(2024) microtubule plus end polymerase(2021) microtubule binding(2025) mRNA binding(2018) histone binding(2025) DNA-binding transcription factor activity(2025)

Molecular function: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2013, 2015, 2025 ribosome biogenesis2013, 2025 regulation of DNA-templated transcription2025 maturation of SSU-rRNA2005 protein ubiquitination2017 protein import into nucleus2025 mitotic spindle organization2019 microtubule polymerization2025 heterochromatin formation2025 establishment or maintenance of microtubule cytoskeleton polarity2017
centrosome duplication2017 SCF complex assembly2017

Cellular component: nucleus2009, 2013, 2017, 2023, 2025 nucleolus2018, 2020, 2024, 2025 plasma membrane2024, 2025 membrane2025 cytoplasm2018, 2025 preribosome, small subunit precursor2015, 2025 nuclear membrane2025 ribosome2013, 2025 spindle pole body2025 spindle pole2023
microtubule plus-end2017 kinetochore2021 cytosol2025 centrosome2021 ISWI-type complex2025 90S preribosome2018

Phylogenetic distribution

Chordates: 21/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 0/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 2/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 15/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 3/4 
Harosa: 2/4 
Hacrobia: 0/0 
Plants: 5/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2015 2016 2017 2018 2019 2020 2021 2022 2023 2024 2025 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
A0A1D8PQQ7_CANAL
CGD»
0.0
CAALFM_C701030CA orf19.7011 mRNA-binding protein Candida albicans
TI:5476 None
 
A0A1S4KT99_IXOSC
EnsemblMetazoa»
0.0
Uncharacterized protein Ixodes scapularis
TI:6945 None 		 
 
A0A1Y1HLJ7_KLENI
neXtProt»
0.0
KFL_000140530 ARM repeat superfamily protein Klebsormidium nitens
TI:105231 None
 
A0A2I3SQ21_PANTR
Ensembl»
0.0
RRP12 Ribosomal RNA processing 12 homolog Pan troglodytes
TI:9598 None
 
A0A2K3CNG0_CHLRE
euHCVdb»
0.0
CHLRE_19g751197v5 Uncharacterized protein Chlamydomonas reinhardtii
TI:3055 None
 
A0A2R6WSB0_MARPO
euHCVdb»
0.0
MARPO_0061s0020 Uncharacterized protein Marchantia polymorpha
TI:3197 None
 
A0A3Q1M070_BOVIN
Ensembl»
0.0
RRP12 Ribosomal RNA processing 12 homolog Bos taurus
TI:9913 None
   
A0A5G2QWF3_PIG
Ensembl»
0.0
RRP12 Ribosomal RNA processing 12 homolog Sus scrofa
TI:9823 None
   
A0A6I8RE83_XENTR
Xenbase»
0.0
rrp12 RRP12-like protein isoform X1
(Ribosomal RNA processing 12 homolog)		 Xenopus tropicalis
TI:8364 None
   
A0A7I4BYU9_PHYPA
EnsemblPlants»
0.0
Uncharacterized protein Physcomitrium patens
TI:3218 None
 
A0A7M7NVH9_STRPU
EnsemblMetazoa»
0.0
Ribosomal RNA-processing protein
12-like conserved domain-containing protein		 Strongylocentrotus purpuratus
TI:7668 None
   
A0A7U2EWK9_PHANO
TubercuList»
0.0
JI435_076030 Ribosomal RNA-processing protein
12-like conserved domain-containing protein		 Phaeosphaeria nodorum
TI:13684 None
 
A0A8I3PYD0_CANLF
Ensembl»
0.0
RRP12 Ribosomal RNA processing 12 homolog Canis lupus
TI:9612 None
   
A0A8J0T5X0_XENLA
Xenbase»
0.0
rrp12.S RRP12-like protein isoform X1 Xenopus laevis
TI:8355 None
   
A0A8J0T8W9_XENLA
Xenbase»
0.0
rrp12.L LOW QUALITY PROTEIN: RRP12-like protein Xenopus laevis
TI:8355 None 		     
A0A8J1JWS8_XENTR
Xenbase»
0.0
LOC101731045 RRP12-like protein Xenopus tropicalis
TI:8364 None 		     
A0A8J1JXW0_XENTR
Xenbase»
0.0
LOC116412241 RRP12-like protein isoform X1 Xenopus tropicalis
TI:8364 None 		     
A0A8V0Z8M3_CHICK
Ensembl»
0.5
RRP12 Ribosomal RNA processing 12 homolog Gallus gallus
TI:9031 None
   
A0A9J7KZZ4_BRAFL
euHCVdb»
0.0
LOC118413858 RRP12-like protein isoform X1 (RRP12-like protein isoform X2)
(RRP12-like protein isoform X3) (RRP12-like protein isoform X4)		 Branchiostoma floridae
TI:7739 None
   
A0ABI7Y005_FELCA
Ensembl»
0.0
RRP12 Ribosomal RNA processing 12 homolog Felis catus
TI:9685 None
   
A0C5F5_PARTE
euHCVdb»
0.0
GSPATT00006521001 Ribosomal RNA-processing protein
12-like conserved domain-containing protein		 Paramecium tetraurelia
TI:5888 None
 
A0CRU3_PARTE
euHCVdb»
0.0
GSPATT00009825001 Ribosomal RNA-processing protein
12-like conserved domain-containing protein		 Paramecium tetraurelia
TI:5888 None 		 
 
A2D7A8_TRIV3
TubercuList»
0.0
TVAG_119620 RRP12 HEAT domain-containing protein Trichomonas vaginalis
TI:5722 None
 
A7F9R3_SCLS1
TubercuList»
0.0
SS1G_14344 Uncharacterized protein Sclerotinia sclerotiorum
TI:5180 None
 
A7RIM7_NEMVE
neXtProt»
0.0
NEMVEDRAFT_v1g82572 RRP12-like protein Nematostella vectensis
TI:45351 None
 
A7T9K6_NEMVE
euHCVdb»
0.0
NEMVEDRAFT_v1g224201 RRP12-like protein Nematostella vectensis
TI:45351 None 		 
 
A8XYA9_CAEBR
WormBase»
0.0
CBG20655 CBG_20655 Protein CBG20655 Caenorhabditis briggsae
TI:6238 None
 
A9VDX5_MONBE
euHCVdb»
0.0
MONBRDRAFT_39345 RRP12 HEAT domain-containing protein Monosiga brevicollis
TI:81824 None
 
B3S2R9_TRIAD
CTD»
0.0
TRIADDRAFT_58459 Ribosomal RNA-processing protein
12-like conserved domain-containing protein		 Trichoplax adhaerens
TI:10228 None
 
B3S2S0_TRIAD
CTD»
0.0
TRIADDRAFT_58460 RRP12-like protein Trichoplax adhaerens
TI:10228 None
 
B6K0C9_SCHJY
TubercuList»
0.0
rrp12 Ribosome biogenesis protein Rrp12 Schizosaccharomyces japonicus
TI:4897 None
 
B6K7H5_SCHJY
TubercuList»
0.0
SJAG_04687 rRNA processing protein Rrp12-like protein Schizosaccharomyces japonicus
TI:4897 None
 
D6WZI8_TRICA
neXtProt»
0.0
AUGUSTUS-3.0.2_11830 RRP12-like protein Tribolium castaneum
TI:7070 None
 
D8QW92_SELML
neXtProt»
0.0
SELMODRAFT_78845 Uncharacterized protein Selaginella moellendorffii
TI:88036 None
 
D8SAL9_SELML
euHCVdb»
0.0
SELMODRAFT_178120 Uncharacterized protein Selaginella moellendorffii
TI:88036 None
 
E3KVD2_PUCGT
TubercuList»
0.0
PGTG_14311 Ribosomal RNA-processing protein
12-like conserved domain-containing protein		 Puccinia graminis
TI:5297 None 		 
 
E9HIT6_DAPPU
neXtProt»
0.0
DAPPUDRAFT_260244 Uncharacterized protein Daphnia pulex
TI:6669 None
 
F0ZEW1_DICPU
TubercuList»
0.0
DICPUDRAFT_149879 Uncharacterized protein Dictyostelium purpureum
TI:5786 None
 
F4NVJ3_BATDJ
euHCVdb»
0.0
BATDEDRAFT_84823 Uncharacterized protein Batrachochytrium dendrobatidis
TI:109871 None
 
F6WGM4_ORNAN
Ensembl»
0.0
RRP12 Ribosomal RNA processing 12 homolog Ornithorhynchus anatinus
TI:9258 None
   
F6X6Z7_MONDO
Ensembl»
0.0
RRP12 Ribosomal RNA processing 12 homolog Monodelphis domestica
TI:13616 None
   
F7ANS3_HORSE
Ensembl»
0.0
RRP12 Ribosomal RNA processing 12 homolog Equus caballus
TI:9796 None
   
F7AUU2_MACMU
Ensembl»
0.0
RRP12 Ribosomal RNA processing 12 homolog Macaca mulatta
TI:9544 None
   
G3RFW8_GORGO
Ensembl»
0.0
RRP12 Ribosomal RNA processing 12 homolog Gorilla gorilla
TI:9593 None
 
H2LXP6_ORYLA
Ensembl»
0.0
RRP12 Ribosomal RNA processing 12 homolog Oryzias latipes
TI:8090 None
   
H3GFF0_PHYRM
EnsemblProtists»
0.0
Uncharacterized protein Phytophthora ramorum
TI:164328 None
 
H9G648_ANOCA
Ensembl»
0.0
RRP12 Ribosomal RNA processing 12 homolog Anolis carolinensis
TI:28377 None
   
M0R3M8_RAT
RGD»
0.5
Rrp12 Ribosomal RNA processing 12 Rattus norvegicus
TI:10116 None
   
Q1K5H7_NEUCR
TubercuList»
0.0
NCU01675 Ribosomal RNA-processing protein 12 Neurospora crassa
TI:5141 None
 
Q386Q9_TRYB2
TubercuList»
0.0
Tb11.02.0110 RRP12 HEAT domain-containing protein Trypanosoma brucei
TI:5691 None
 
Q4KMF4_DANRE
ZFIN»
0.0
rrp12 RRP12-like protein (Ribosomal RNA
processing 12 homolog (S. cerevisiae))		 Danio rerio
TI:7955 None
 
Q4Q3T4_LEIMA
TubercuList»
0.0
LMJF_33_2530 RRP12 HEAT domain-containing protein Leishmania major
TI:5664 None
 
Q4X0Z0_ASPFU
TubercuList»
0.0
AFUA_2G11810 Pre-rRNA processing protein Rrp12, putative Aspergillus fumigatus
TI:746128 None
 
Q54UV2_DICDI
dictyBase»
0.0
DDB_G0280797 ETS domain-containing protein Dictyostelium discoideum
TI:44689 None
 
Q5AZT0_EMENI
TubercuList»
0.0
ANIA_06200 Pre-rRNA processing protein
Rrp12, putative (AFU_orthologue AFUA_2G11810)		 Emericella nidulans
TI:162425 None
 
Q5K7E6_CRYD1
TubercuList»
0.0
CNN00120 Ribosomal protein, putative Cryptococcus deneoformans
TI:40410 None
 
Q6C6P9_YARLI
TubercuList»
0.0
YALI0_E07425g YALI0E07425p Yarrowia lipolytica
TI:4952 None
 
Q750G7_EREGS
euHCVdb»
0.0
AGOS_AGL014C AGL014Cp Eremothecium gossypii
TI:33169 None
 
Q7QD52_ANOGA
EnsemblMetazoa»
0.0
1273002 AGAP002961-PA Anopheles gambiae
TI:7165 None
 
Q965N8_CAEEL
WormBase»
0.0
CELE_Y46E12BL.2 Y46E12BL.2 Ribosomal RNA-processing protein
12-like conserved domain-containing protein		 Caenorhabditis elegans
TI:6239 None
 
RRP12_CHICK
CTD»
0.5
RRP12 RRP12-like protein Gallus gallus
TI:9031 None
 
RRP12_DROME
FlyBase»
0.5
CG2691 RRP12-like protein Drosophila melanogaster
TI:7227 None
 
RRP12_HUMAN
Ensembl»
1.0
RRP12 RRP12-like protein Homo sapiens
TI:9606 None
 
RRP12_MOUSE
Ensembl»
0.5
Rrp12 RRP12-like protein Mus musculus
TI:10090 None
 
RRP12_SCHPO
PomBase»
1.0
rrp12 Putative ribosomal RNA-processing protein 12 Schizosaccharomyces pombe
TI:4896 None
 
RRP12_YEAST
SGD»
3.6
RRP12 Ribosomal RNA-processing protein 12 Saccharomyces cerevisiae
TI:4932 None
 
W5M895_LEPOC
Ensembl»
0.0
Ribosomal RNA processing 12 homolog Lepisosteus oculatus
TI:7918 None
 
YON1_SCHPO
PomBase»
0.5
SPBC1105.01 SPBP7E8.03 Uncharacterized protein C1105.01 Schizosaccharomyces pombe
TI:4896 None