Collated Gene Ontology terms

Biological process: RNA binding(2013, 2014, 2018, 2024)

Molecular function: rRNA processing2009, 2013, 2018, 2019, 2024 ribosome biogenesis2024 pharyngeal system development2019, 2024 neural crest cell development2019, 2024 ribosomal large subunit assembly2021 maturation of SSU-rRNA2023

Cellular component: nucleolus2009, 2016, 2017, 2018, 2023, 2024 nucleus2009, 2017, 2018, 2024 small-subunit processome2023, 2024 nucleoplasm2024 membrane2024 extracellular space2013

Phylogenetic distribution

Chordates: 21/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 2/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 0/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 14/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 3/3 
Excavates: 4/4 
Harosa: 4/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
B8JKQ1_DANRE
ZFIN»
3.4
fe06g12 ESF1 homolog (ESF1, nucleolar
pre-rRNA-processing protein, homolog (S. cerevisiae))		 Danio rerio
TI:7955 None
 
ESF1_YEAST
SGD»
3.2
ESF1 Pre-rRNA-processing protein ESF1
(18S rRNA factor 1)		 Saccharomyces cerevisiae
TI:4932 None
 
ESF1_HUMAN
Ensembl»
1.5
ESF1 ESF1 homolog (ABT1-associated protein) Homo sapiens
TI:9606 None
 
Q55EB8_DICDI
dictyBase»
1.5
DDB_G0269312 NUC153 domain-containing protein Dictyostelium discoideum
TI:44689 None
 
ESF1_RAT
RGD»
1.0
Esf1 ESF1 homolog (ABT1-associated protein) Rattus norvegicus
TI:10116 None
 
ESF1_SCHPO
PomBase»
1.0
esf1 Pre-rRNA-processing protein esf1 Schizosaccharomyces pombe
TI:4896 None
 
O46307_DROME
FlyBase»
1.0
EG:8D8.4 EG:8D8.4 protein Drosophila melanogaster
TI:7227 None
 
Q20969_CAEEL
WormBase»
1.0
CELE_F58B3.4 F58B3.4 NUC153 domain-containing protein Caenorhabditis elegans
TI:6239 None
 
A0A022RLF0_ERYGU
EnsemblFungi»
0.0
MIMGU_mgv1a019501mg NUC153 domain-containing protein Erythranthe guttata
TI:4155 None
 
A0A061EEF0_THECC
EnsemblPlants»
0.0
TCM_018180 Uncharacterized protein Theobroma cacao
TI:3641 None
 
A0A061ELX6_THECC
EnsemblPlants»
0.0
TCM_018179 Nucleus isoform 1 Theobroma cacao
TI:3641 None
 
A0A061FIL8_THECC
EnsemblPlants»
0.0
TCM_035334 Uncharacterized protein isoform 1 Theobroma cacao
TI:3641 None
 
A0A061FIM3_THECC
EnsemblPlants»
0.0
TCM_035335 Nucleus isoform 3 Theobroma cacao
TI:3641 None
 
A0A067FVA9_CITSI
Ensembl»
0.0
CISIN_1g005276mg NUC153 domain-containing protein Citrus sinensis
TI:2711 None
 
A0A078HGW1_BRANA
EnsemblPlants»
0.0
BnaA05g34050D (rape) hypothetical
protein (BnaA05g34050D protein)		 Brassica napus
TI:3708 None
 
A0A078HZG6_BRANA
EnsemblPlants»
0.0
BnaC05g48650D (rape) hypothetical
protein (BnaC05g48650D protein)		 Brassica napus
TI:3708 None
 
A0A0A0L333_CUCSA
EnsemblPlants»
0.0
Csa_3G119430 NUC153 domain-containing protein Cucumis sativus
TI:3659 None
 
A0A0K9PED6_ZOSMR
EnsemblPlants»
0.0
ZOSMA_292G00080 NUC153 domain-containing protein Zostera marina
TI:29655 None
 
A0A1D6IDW4_MAIZE
EnsemblPlants»
0.0
100278378 Pre-rRNA-processing protein esf1 Zea mays
TI:4577 None
 
A0A1D8PEZ5_CANAL
EnsemblFungi»
0.0
CAALFM_C110970WA orf19.9855 NUC153 domain-containing protein Candida albicans
TI:5476 None
 
A0A1L8G6Q2_XENLA
Xenbase»
0.0
esf1.L ESF1 homolog isoform X1 Xenopus laevis
TI:8355 None
   
A0A1S3ZYG5_TOBAC
EnsemblFungi»
0.0
LOC107791849 Pre-rRNA-processing protein ESF1-like Nicotiana tabacum
TI:4097 None
   
A0A1S4A4M3_TOBAC
EnsemblFungi»
0.0
LOC107793663 Pre-rRNA-processing protein ESF1-like Nicotiana tabacum
TI:4097 None
   
A0A1U8AG38_NELNU
EnsemblBacteria»
0.0
LOC104603656 Pre-rRNA-processing protein ESF1 Nelumbo nucifera
TI:4432 None
   
A0A1U8PJ65_GOSHI
Ensembl»
0.0
LOC107959652 Pre-rRNA-processing protein ESF1-like Gossypium hirsutum
TI:3635 None
   
A0A1U8PM68_GOSHI
Ensembl»
0.0
LOC107959697 Pre-rRNA-processing protein esf1-like Gossypium hirsutum
TI:3635 None
   
A0A1Y1I6T7_KLENI
EnsemblPlants»
0.0
KFL_003030030 NUC153 domain-containing protein Klebsormidium nitens
TI:105231 None
 
A0A251TYV7_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr09g0257321 HanXRQr2_Chr09g0388731 Pre-rRNA-processing protein Esf1 Helianthus annuus
TI:4232 None
 
A0A2C9V6D8_MANES
EnsemblPlants»
0.0
MANES_10G142700 NUC153 domain-containing protein Manihot esculenta
TI:3983 None
 
A0A2C9VY51_MANES
EnsemblPlants»
0.0
MANES_05G205600 NUC153 domain-containing protein Manihot esculenta
TI:3983 None
 
A0A2G3A9X8_CAPAN
EnsemblPlants»
0.0
T459_06150 NUC153 domain-containing protein Capsicum annuum
TI:4072 None
 
A0A2I4FDA5_JUGRE
EnsemblPlants»
0.0
LOC108997714 Pre-rRNA-processing protein esf1 Juglans regia
TI:51240 None
 
A0A2K1J312_PHYPA
EnsemblPlants»
0.0
PHYPA_021761 NUC153 domain-containing protein Physcomitrium patens
TI:3218 None
 
A0A2R6WSA5_MARPO
EnsemblPlants»
0.0
MARPO_0061s0018 NUC153 domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A3B3HFX0_ORYLA
Ensembl»
0.0
ESF1, nucleolar pre-rRNA processing
protein, homolog (S. cerevisiae)		 Oryzias latipes
TI:8090 None
   
A0A3B6AWJ1_WHEAT
EnsemblPlants»
0.0
CFC21_016515 NUC153 domain-containing protein Triticum aestivum
TI:4565 None
 
A0A3B6C4G5_WHEAT
EnsemblPlants»
0.0
CFC21_023009 NUC153 domain-containing protein Triticum aestivum
TI:4565 None
 
A0A3B6DBR8_WHEAT
EnsemblPlants»
0.0
NUC153 domain-containing protein Triticum aestivum
TI:4565 None
   
A0A3B6MJG6_WHEAT
EnsemblPlants»
0.0
CFC21_075928 NUC153 domain-containing protein Triticum aestivum
TI:4565 None
 
A0A3B6NLP0_WHEAT
EnsemblPlants»
0.0
NUC153 domain-containing protein Triticum aestivum
TI:4565 None
   
A0A3B6PJQ9_WHEAT
EnsemblPlants»
0.0
CFC21_087169 NUC153 domain-containing protein Triticum aestivum
TI:4565 None
 
A0A3B6QAF7_WHEAT
EnsemblPlants»
0.0
CFC21_091466 NUC153 domain-containing protein Triticum aestivum
TI:4565 None
 
A0A3Q7FTZ7_SOLLC
EnsemblPlants»
0.0
101268053 NUC153 domain-containing protein Solanum lycopersicum
TI:4081 None
   
A0A5F7ZH41_MACMU
Ensembl»
0.0
ESF1 ESF1 nucleolar pre-rRNA
processing protein homolog		 Macaca mulatta
TI:9544 None
   
A0A7M7PR04_STRPU
EnsemblMetazoa»
0.0
NUC153 domain-containing protein Strongylocentrotus purpuratus
TI:7668 None
   
A0A804I9M8_MUSAM
EnsemblPlants»
0.0
GSMUA_210790.1 (wild Malaysian banana) hypothetical protein Musa acuminata
TI:4641 None
 
A0A8I3PPA1_CANLF
Ensembl»
0.0
ESF1 ESF1 nucleolar pre-rRNA
processing protein homolog		 Canis lupus
TI:9612 None
   
A0A8I7B5P6_HORVV
EnsemblPlants»
0.0
NUC153 domain-containing protein Hordeum vulgare
TI:4513 None
   
A0A8V0Z8K8_CHICK
Ensembl»
0.0
ESF1 ESF1 nucleolar pre-rRNA
processing protein homolog		 Gallus gallus
TI:9031 None
   
A0A9J7LP63_BRAFL
CTD»
0.0
LOC118422003 ESF1 homolog Branchiostoma floridae
TI:7739 None
   
A0DHM1_PARTE
EnsemblProtists»
0.0
GSPATT00016925001 Chromosome undetermined scaffold_50,
whole genome shotgun sequence		 Paramecium tetraurelia
TI:5888 None
 
A2DLU5_TRIV3
VEuPathDB»
0.0
TVAG_462330 NUC153 domain-containing protein Trichomonas vaginalis
TI:5722 None
 
A7F8Y7_SCLS1
EnsemblFungi»
0.0
SS1G_14068 NUC153 domain-containing protein Sclerotinia sclerotiorum
TI:5180 None
 
A7F8Y8_SCLS1
EnsemblFungi»
0.0
SS1G_14069 NUC153 domain-containing protein Sclerotinia sclerotiorum
TI:5180 None
 
A7SSG1_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g129893 NUC153 domain-containing protein Nematostella vectensis
TI:45351 None
 
A8B643_GIAIC
EnsemblProtists»
0.0
GL50803_008782 GL50803_8782 Protein required for cell viability Giardia intestinalis
TI:5741 None
 
A8I029_CHLRE
EnsemblPlants»
0.0
CHLRE_10g452500v5 Uncharacterized protein Chlamydomonas reinhardtii
TI:3055 None
 
A8X0V8_CAEBR
WormBase»
0.0
CBG06109 CBG_06109 Protein CBG06109 Caenorhabditis briggsae
TI:6238 None
 
A9UNJ9_MONBE
EnsemblProtists»
0.0
MONBRDRAFT_31074 NUC153 domain-containing protein Monosiga brevicollis
TI:81824 None
 
B1N3N6_ENTH1
EnsemblProtists»
0.0
EHI_097980 NUC153 domain-containing protein Entamoeba histolytica
TI:5759 None
 
B6JWN6_SCHJY
EnsemblFungi»
0.0
SJAG_00813 Pre-rRNA processing protein Esf1 Schizosaccharomyces japonicus
TI:4897 None
 
B7QLZ1_IXOSC
EnsemblMetazoa»
0.0
IscW_ISCW023079 NUC153 domain-containing protein Ixodes scapularis
TI:6945 None
 
B8BZ39_THAPS
EnsemblProtists»
0.0
THAPSDRAFT_22212 NUC153 domain-containing protein Thalassiosira pseudonana
TI:35128 None
 
B9T718_RICCO
EnsemblBacteria»
0.0
RCOM_0310730 Pre-rRNA-processing protein ESF1, putative Ricinus communis
TI:3988 None
 
C5XA68_SORBI
EnsemblPlants»
0.0
SORBI_3002G325400 NUC153 domain-containing protein Sorghum bicolor
TI:4558 None
 
D1ZZY9_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_07375 ESF1 homolog-like Protein Tribolium castaneum
TI:7070 None
 
D8SEQ3_SELML
EnsemblPlants»
0.0
SELMODRAFT_268496 NUC153 domain-containing protein Selaginella moellendorffii
TI:88036 None
 
D8SHN7_SELML
EnsemblPlants»
0.0
SELMODRAFT_268642 NUC153 domain-containing protein Selaginella moellendorffii
TI:88036 None
 
E9GIS0_DAPPU
EnsemblMetazoa»
0.0
EOG090X0289 EOG090X0289 Daphnia pulex
TI:6669 None
 
ESF1_ASHGO
EnsemblFungi»
0.0
ESF1 Pre-rRNA-processing protein ESF1
(18S rRNA factor 1)		 Ashbya gossypii
TI:33169 None
 
ESF1_MOUSE
Ensembl»
0.0
Esf1 ESF1 homolog (ABT1-associated protein) Mus musculus
TI:10090 None
 
F0Z6T8_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_15659 NUC153 domain-containing protein Dictyostelium purpureum
TI:5786 None
 
F1SBJ2_PIG
Ensembl»
0.0
ESF1 ESF1 nucleolar pre-rRNA
processing protein homolog		 Sus scrofa
TI:9823 None
   
F4P5T0_BATDJ
EnsemblBacteria»
0.0
BATDEDRAFT_12422 NUC153 domain-containing protein Batrachochytrium dendrobatidis
TI:109871 None
 
F6HD50_VITVI
EnsemblPlants»
0.0
VIT_00s0510g00040 NUC153 domain-containing protein Vitis vinifera
TI:29760 None
 
F6HDC8_VITVI
EnsemblPlants»
0.0
VIT_00s1677g00020 NUC153 domain-containing protein Vitis vinifera
TI:29760 None
 
F6I7Q0_VITVI
EnsemblPlants»
0.0
VIT_00s1987g00010 Uncharacterized protein Vitis vinifera
TI:29760 None
 
F6RB84_ORNAN
Ensembl»
0.0
ESF1 ESF1 nucleolar pre-rRNA
processing protein homolog		 Ornithorhynchus anatinus
TI:9258 None
   
F7A0S2_XENTR
Xenbase»
0.0
esf1 ESF1 homolog isoform X1 (ESF1
nucleolar pre-rRNA processing protein homolog)		 Xenopus tropicalis
TI:8364 None
   
F7ASI8_MONDO
Ensembl»
0.0
ESF1 ESF1 nucleolar pre-rRNA
processing protein homolog		 Monodelphis domestica
TI:13616 None
   
F7BLB3_HORSE
Ensembl»
0.0
ESF1 ESF1 nucleolar pre-rRNA
processing protein homolog		 Equus caballus
TI:9796 None
   
G1K8X2_ANOCA
Ensembl»
0.0
ESF1 ESF1 nucleolar pre-rRNA
processing protein homolog		 Anolis carolinensis
TI:28377 None
   
G3QUZ3_GORGO
Ensembl»
0.0
ESF1 ESF1 nucleolar pre-rRNA
processing protein homolog		 Gorilla gorilla
TI:9593 None
 
G7JB27_MEDTR
EnsemblPlants»
0.0
MTR_3g107330 Uncharacterized protein Medicago truncatula
TI:3880 None
 
G7JB29_MEDTR
EnsemblPlants»
0.0
MTR_3g107350 Pre-rRNA-processing esf1-like protein Medicago truncatula
TI:3880 None
 
G7JDZ9_MEDTR
EnsemblPlants»
0.0
11411854 Pre-rRNA-processing esf1-like protein Medicago truncatula
TI:3880 None
 
G7JNE8_MEDTR
EnsemblPlants»
0.0
MTR_4g073330 Pre-rRNA-processing esf1-like protein Medicago truncatula
TI:3880 None
 
H2MWM9_ORYLA
Ensembl»
0.0
esf1 ESF1 nucleolar pre-rRNA
processing protein homolog		 Oryzias latipes
TI:8090 None
   
H2XW54_CIOIN
Ensembl»
0.0
NUC153 domain-containing protein Ciona intestinalis
TI:7719 None
 
H3GH31_PHYRM
EnsemblProtists»
0.0
NUC153 domain-containing protein Phytophthora ramorum
TI:164328 None
 
H6QSL9_PUCGT
EnsemblFungi»
0.0
PGTG_21833 Uncharacterized protein Puccinia graminis
TI:5297 None
 
H6QSM0_PUCGT
EnsemblFungi»
0.0
PGTG_21834 NUC153 domain-containing protein Puccinia graminis
TI:5297 None
 
I1GTT2_BRADI
EnsemblPlants»
0.0
100837852 NUC153 domain-containing protein Brachypodium distachyon
TI:15368 None
 
K3ZQR7_SETIT
EnsemblPlants»
0.0
101778470 NUC153 domain-containing protein Setaria italica
TI:4555 None
 
K7BUZ2_PANTR
Ensembl»
0.0
ESF1 ESF1 nucleolar pre-rRNA processing protein homolog
(ESF1, nucleolar pre-rRNA processing protein, homolog)		 Pan troglodytes
TI:9598 None
 
K7K6G1_SOYBN
EnsemblPlants»
0.0
100788064 NUC153 domain-containing protein Glycine max
TI:3847 None
 
K7MGX2_SOYBN
EnsemblPlants»
0.0
100785167 NUC153 domain-containing protein Glycine max
TI:3847 None
 
M0ZVU9_SOLTU
EnsemblPlants»
0.0
102602551 Pre-rRNA-processing protein ESF1 Solanum tuberosum
TI:4113 None
   
M3WZT6_FELCA
Ensembl»
0.0
ESF1 ESF1 nucleolar pre-rRNA
processing protein homolog		 Felis catus
TI:9685 None
 
M4C9Y9_BRACM
EnsemblPlants»
0.0
NUC153 domain-containing protein Brassica campestris
TI:3711 None
   
M4FDG9_BRACM
EnsemblPlants»
0.0
NUC153 domain-containing protein Brassica campestris
TI:3711 None
   
M5W851_PRUPE
EnsemblPlants»
0.0
PRUPE_7G173800 Uncharacterized protein Prunus persica
TI:3760 None
 
Q38AI3_TRYB2
VEuPathDB»
0.0
Tb10.6k15.2760 NUC153 domain-containing protein Trypanosoma brucei
TI:5691 None
 
Q4Q0A5_LEIMA
EnsemblProtists»
0.0
LMJF_36_6520 NUC153 domain-containing protein Leishmania major
TI:5664 None
 
Q4WHH1_ASPFU
EnsemblFungi»
0.0
AFUA_2G05420 Pre-rRNA processing protein Esf1, putative Aspergillus fumigatus
TI:746128 None
 
Q5AW27_EMENI
EnsemblFungi»
0.0
ANIA_07503 Pre-rRNA processing protein
Esf1, putative (AFU_orthologue AFUA_2G05420)		 Emericella nidulans
TI:162425 None
 
Q5KPW7_CRYNJ
EnsemblFungi»
0.0
CNA01290 rRNA processing-related protein, putative Cryptococcus neoformans
TI:5207 None
 
Q5TNQ7_ANOGA
EnsemblMetazoa»
0.0
3290799 AGAP003294-PA Anopheles gambiae
TI:7165 None
 
Q6CBN0_YARLI
EnsemblFungi»
0.0
YALI0_C17083g YALI0C17083p Yarrowia lipolytica
TI:4952 None
 
Q7RYC2_NEUCR
EnsemblFungi»
0.0
NCU04485 Pre-rRNA processing protein Esf1 Neurospora crassa
TI:5141 None
 
Q7XHX9_ORYSJ
EnsemblPlants»
0.0
Os07g0531700 Os07g0531700 protein (cDNA
clone:J023094A01, full insert sequence)		 Oryza sativa
TI:4530 None
 
Q8I5X4_PLAF7
EnsemblProtists»
0.0
PF3D7_1207100 Small subunit rRNA processing factor, putative Plasmodium falciparum
TI:5833 None
 
Q9MAC6_ARATH
TAIR»
0.0
At3g01160 Pre-rRNA-processing ESF1-like
protein (T4P13.15 protein)		 Arabidopsis thaliana
TI:3702 None
 
T1EFS6_HELRO
EnsemblMetazoa»
0.0
20195428 NUC153 domain-containing protein Helobdella robusta
TI:6412 None
 
U5GEW1_POPTR
EnsemblPlants»
0.0
POPTR_005G108800 NUC153 domain-containing protein Populus trichocarpa
TI:3694 None
 
W1NUF8_AMBTC
EnsemblPlants»
0.0
AMTR_s00002p00245500 NUC153 domain-containing protein Amborella trichopoda
TI:13333 None
 
W5NGB6_LEPOC
Ensembl»
0.0
ESF1, nucleolar pre-rRNA processing
protein, homolog (S. cerevisiae)		 Lepisosteus oculatus
TI:7918 None