Collated Gene Ontology terms

Biological process: ribosomal small subunit binding(2012, 2019, 2024) rRNA binding(2012, 2019, 2024) RNA binding(2014)

Molecular function: mitochondrial translation2012, 2019, 2020, 2024 regulation of translation2024

Cellular component: mitochondrion2009, 2012, 2014, 2019, 2023, 2024 ribosome2024 ribonucleoprotein complex2024 plasma membrane2023, 2024 nucleoplasm2023, 2024 cytosol2023, 2024 mitochondrial inner membrane2014, 2020 mitochondrial small ribosomal subunit2020

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 0/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 0/3 
Excavates: 0/4 
Harosa: 0/4 
Hacrobia: 0/0 
Plants: 0/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
G1KLU2_ANOCA
Ensembl»
0.0
PTCD3 Small ribosomal subunit protein mS39 Anolis carolinensis
TI:28377 None
   
Q7Q1I9_ANOGA
EnsemblMetazoa»
0.0
1279178 Small ribosomal subunit protein mS39 Anopheles gambiae
TI:7165 None
 
PTCD3_BOVIN
Ensembl»
0.0
PTCD3 Small ribosomal subunit protein mS39 (28S ribosomal protein
S39, mitochondrial) (MRP-S39) (Pentatricopeptide repeat domain-containing protein 3, mitochondrial)		 Bos taurus
TI:9913 None
 
A0A9J7MPD5_BRAFL
CTD»
0.0
LOC118414298 Small ribosomal subunit protein mS39 Branchiostoma floridae
TI:7739 None
   
A8WJ70_CAEBR
WormBase»
0.0
let-630 Small ribosomal subunit protein mS39 Caenorhabditis briggsae
TI:6238 None
 
Q9N584_CAEEL
WormBase»
1.5
let-630 Small ribosomal subunit protein mS39 Caenorhabditis elegans
TI:6239 None
 
A0A8I3RXL2_CANLF
Ensembl»
0.0
PTCD3 Small ribosomal subunit protein mS39 Canis lupus
TI:9612 None
   
F6TT65_CIOIN
Ensembl»
0.0
Uncharacterized protein Ciona intestinalis
TI:7719 None
 
PTCD3_DANRE
ZFIN»
3.0
ptcd3 Small ribosomal subunit protein mS39
(Pentatricopeptide repeat domain-containing protein 3, mitochondrial)		 Danio rerio
TI:7955 None
 
E9G0B5_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_221711 Small ribosomal subunit protein mS39 Daphnia pulex
TI:6669 None
 
E9I3U4_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_340092 Uncharacterized protein Daphnia pulex
TI:6669 None
 
PTCD3_DROME
FlyBase»
3.0
CG4679 Small ribosomal subunit protein
mS39 (Protein PTCD3 homolog, mitochondrial)		 Drosophila melanogaster
TI:7227 None
 
A0A3Q2GYE2_HORSE
Ensembl»
0.0
LOC111771997 Small ribosomal subunit protein mS39 Equus caballus
TI:9796 None
   
F6W365_HORSE
Ensembl»
0.0
PTCD3 Small ribosomal subunit protein mS39 Equus caballus
TI:9796 None
   
A0A2I2UTS3_FELCA
Ensembl»
0.0
PTCD3 Small ribosomal subunit protein mS39 Felis catus
TI:9685 None
 
A0A8V0YWH6_CHICK
Ensembl»
0.0
PTCD3 Small ribosomal subunit protein mS39 Gallus gallus
TI:9031 None
   
G3QHE2_GORGO
Ensembl»
0.0
PTCD3 Small ribosomal subunit protein mS39 Gorilla gorilla
TI:9593 None
 
T1FVL9_HELRO
EnsemblMetazoa»
0.0
20212865 Small ribosomal subunit protein mS39 Helobdella robusta
TI:6412 None
 
PTCD3_HUMAN
Ensembl»
5.0
PTCD3 Small ribosomal subunit protein mS39 (28S ribosomal protein S39, mitochondrial) (MRP-S39)
(Pentatricopeptide repeat domain-containing protein 3, mitochondrial) (Transformation-related gene 15 protein) (TRG-15)		 Homo sapiens
TI:9606 None
 
B7PCY6_IXOSC
EnsemblMetazoa»
0.0
IscW_ISCW003376 Uncharacterized protein Ixodes scapularis
TI:6945 None
 
W5MY69_LEPOC
Ensembl»
0.0
Small ribosomal subunit protein mS39 Lepisosteus oculatus
TI:7918 None
 
F7AG04_MACMU
Ensembl»
0.0
PTCD3 Small ribosomal subunit protein mS39 Macaca mulatta
TI:9544 None
   
F7CQ39_MONDO
Ensembl»
0.0
PTCD3 Small ribosomal subunit protein mS39 Monodelphis domestica
TI:13616 None
   
PTCD3_MOUSE
Ensembl»
2.1
Ptcd3 Small ribosomal subunit protein mS39 (28S ribosomal protein
S39, mitochondrial) (MRP-S39) (Pentatricopeptide repeat domain-containing protein 3, mitochondrial)		 Mus musculus
TI:10090 None
 
A7SHF8_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g245296 Small ribosomal subunit protein mS39 Nematostella vectensis
TI:45351 None
 
A7SHG0_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g212337 Small ribosomal subunit protein mS39 Nematostella vectensis
TI:45351 None
 
F7F7W4_ORNAN
Ensembl»
0.0
PTCD3 Small ribosomal subunit protein mS39 Ornithorhynchus anatinus
TI:9258 None
   
H2LY10_ORYLA
Ensembl»
0.0
ptcd3 Small ribosomal subunit protein mS39 Oryzias latipes
TI:8090 None
   
H2R0D7_PANTR
Ensembl»
0.0
PTCD3 Small ribosomal subunit protein mS39 Pan troglodytes
TI:9598 None
 
A0A8R1V5V2_PRIPA
EnsemblMetazoa»
0.0
WBGene00304467 Small ribosomal subunit protein mS39 Pristionchus pacificus
TI:54126 None
   
A0A8I6ANU2_RAT
RGD»
3.0
Ptcd3 Small ribosomal subunit protein mS39 Rattus norvegicus
TI:10116 None
   
A0A7M7SZ93_STRPU
EnsemblMetazoa»
0.0
Small ribosomal subunit protein mS39 Strongylocentrotus purpuratus
TI:7668 None
   
K7GKS8_PIG
Ensembl»
0.0
PTCD3 Small ribosomal subunit protein mS39 Sus scrofa
TI:9823 None
   
D6WAL8_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_00373 Small ribosomal subunit protein mS39 Tribolium castaneum
TI:7070 None
 
B3S1E0_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_57796 Uncharacterized protein Trichoplax adhaerens
TI:10228 None
 
PTCD3_XENLA
Xenbase»
0.0
ptcd3 Small ribosomal subunit protein mS39
(Pentatricopeptide repeat domain-containing protein 3, mitochondrial)		 Xenopus laevis
TI:8355 None
 
PTCD3_XENTR
Xenbase»
0.0
ptcd3 Small ribosomal subunit protein mS39
(Pentatricopeptide repeat-containing protein 3, mitochondrial)		 Xenopus tropicalis
TI:8364 None