Collated Gene Ontology terms

Biological process: RNA binding(2002, 2003, 2014, 2020, 2022, 2023, 2024) rRNA binding(2015, 2024) nucleic acid binding(2024) mRNA binding(2006)

Molecular function: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2015, 2020, 2024 ribosomal large subunit biogenesis2013, 2024 small-subunit processome assembly2017 ribosome biogenesis2024 rRNA transcription2003 rRNA processing2024 rRNA metabolic process2003 protein-containing complex assembly2003 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2017
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2017 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2017 assembly of large subunit precursor of preribosome2024 RNA processing2014

Cellular component: nucleolus2002, 2009, 2013, 2017, 2021, 2023, 2024 nucleus2013, 2017, 2024 cytoplasm2002, 2003, 2024 chromosome2023, 2024 condensed nuclear chromosome2003, 2024 nucleoplasm2023, 2024 preribosome, large subunit precursor2013, 2018, 2024 ribonucleoprotein complex2024

Phylogenetic distribution

Chordates: 21/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 4/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 14/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 3/3 
Excavates: 4/4 
Harosa: 3/4 
Hacrobia: 0/0 
Plants: 36/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
A0A8V0ZLX0_CHICK
Ensembl»
0.0
NIFK Nucleolar protein interacting with
the FHA domain of MKI67		 Gallus gallus
TI:9031 None
   
MK67I_RAT
RGD»
1.5
Nifk MKI67 FHA domain-interacting nucleolar phosphoprotein (Nucleolar protein
interacting with the FHA domain of pKI-67)		 Rattus norvegicus
TI:10116 None
 
Q22135_CAEEL
WormBase»
1.0
nifk-1 RRM domain-containing protein Caenorhabditis elegans
TI:6239 None
 
Q86H55_DICDI
dictyBase»
1.0
DDB_G0275885 RRM domain-containing protein Dictyostelium discoideum
TI:44689 None
 
Q9VCY1_DROME
FlyBase»
1.5
Dmel\CG6937 RRM domain-containing protein Drosophila melanogaster
TI:7227 None
 
YQL5_SCHPO
PomBase»
1.8
SPCC1827.05c Uncharacterized RNA-binding protein C1827.05c Schizosaccharomyces pombe
TI:4896 None
 
MK67I_DANRE
ZFIN»
1.0
nifk MKI67 FHA domain-interacting nucleolar
phosphoprotein (Nucleolar phosphoprotein NOPP34-like protein)		 Danio rerio
TI:7955 None
 
NOP15_YEAST
SGD»
4.2
NOP15 Ribosome biogenesis protein
15 (Nucleolar protein 15)		 Saccharomyces cerevisiae
TI:4932 None
 
MK67I_MOUSE
Ensembl»
0.5
Nifk MKI67 FHA domain-interacting nucleolar phosphoprotein (Nucleolar protein
interacting with the FHA domain of pKI-67) (mNIFK)		 Mus musculus
TI:10090 None
 
Q9LZ65_ARATH
TAIR»
0.0
T32M21_200 AT5g04600/T32M21_200 (Putative RNA binding protein) (RNA-binding
(RRM/RBD/RNP motifs) family protein) (Rna binding protein-like)		 Arabidopsis thaliana
TI:3702 None
 
MK67I_HUMAN
Ensembl»
4.1
NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein (Nucleolar phosphoprotein Nopp34) (Nucleolar
protein interacting with the FHA domain of pKI-67) (hNIFK)		 Homo sapiens
TI:9606 None