Collated Gene Ontology terms

Biological process: nucleic acid binding(2025) RNA binding(2025)

Molecular function: mRNA processing2025 RNA splicing2025 mRNA splicing, via spliceosome2025

Cellular component: nucleoplasm2017, 2024, 2025 spliceosomal complex2025 nucleus2018 mitochondrion2018

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 0/3 
Arthropods: 3/5 
Tardigrades: 0/0 
Placozoa: 0/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 0/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 0/3 
Excavates: 0/4 
Harosa: 1/4 
Hacrobia: 0/0 
Plants: 35/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2015 2016 2017 2018 2019 2020 2021 2022 2023 2024 2025 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
RBM48_HUMAN
Ensembl»
0.6
RBM48 RNA-binding protein 48 Homo sapiens
TI:9606 None
 
RBM48_MOUSE
Ensembl»
0.0
Rbm48 RNA-binding protein 48 Mus musculus
TI:10090 None
 
A0A1L8FQY6_XENLA
Xenbase»
0.0
rbm48.S RNA-binding protein 48 Xenopus laevis
TI:8355 None
   
A0A1S3Z396_TOBAC
euHCVdb»
0.0
LOC107782542 RNA-binding protein 48 Nicotiana tabacum
TI:4097 None
   
A0A1S4D3K1_TOBAC
euHCVdb»
0.0
LOC107825510 RNA-binding protein 48 Nicotiana tabacum
TI:4097 None
   
A0A2I2Y675_GORGO
Ensembl»
0.0
RBM48 RNA-binding protein 48 Gorilla gorilla
TI:9593 None
 
A0A8I3NNZ0_CANLF
Ensembl»
0.0
RBM48 RNA-binding protein 48 Canis lupus
TI:9612 None
   
A0A9L0RL62_HORSE
Ensembl»
0.0
RBM48 RNA-binding protein 48 Equus caballus
TI:9796 None
   
A0A9R0K7W1_SPIOL
euHCVdb»
0.0
LOC110799716 RNA-binding protein 48 Spinacia oleracea
TI:3562 None
   
F1SFC8_PIG
Ensembl»
0.0
RBM48 RNA-binding protein 48 Sus scrofa
TI:9823 None
   
F4IGS5_ARATH
TAIR»
0.0
At2g27790 RNA-binding protein 48 Arabidopsis thaliana
TI:3702 None
 
F4K2V9_ARATH
TAIR»
0.0
At5g27300 RNA-binding protein 48 Arabidopsis thaliana
TI:3702 None
 
F6RN96_MACMU
Ensembl»
0.0
RBM48 RNA-binding protein 48 Macaca mulatta
TI:9544 None
   
F7G7G9_MONDO
Ensembl»
0.0
RBM48 RNA-binding protein 48 Monodelphis domestica
TI:13616 None
   
G1KR14_ANOCA
Ensembl»
0.0
RBM48 RNA-binding protein 48 Anolis carolinensis
TI:28377 None
   
H2QZF7_PANTR
Ensembl»
0.0
RBM48 RNA-binding protein 48 Pan troglodytes
TI:9598 None
 
Q5F3S8_CHICK
Ensembl»
0.0
RBM48 RNA-binding protein 48 Gallus gallus
TI:9031 None
 
RBM48_RAT
RGD»
0.0
Rbm48 RNA-binding protein 48 Rattus norvegicus
TI:10116 None
 
A0A022Q3I0_ERYGU
euHCVdb»
0.0
MIMGU_mgv1a022373mg RNA-binding protein 48 Erythranthe guttata
TI:4155 None
 
A0A061E6B7_THECC
euHCVdb»
0.0
TCM_010406 RNA-binding protein 48 Theobroma cacao
TI:3641 None
 
A0A067GRL8_CITSI
euHCVdb»
0.0
CISIN_1g026963mg RNA-binding protein 48 Citrus sinensis
TI:2711 None
 
A0A0A0LQL2_CUCSA
euHCVdb»
0.0
Csa_2G348830 RNA-binding protein 48 Cucumis sativus
TI:3659 None
 
A0A0K9NRZ4_ZOSMR
euHCVdb»
0.0
ZOSMA_67G00340 RNA-binding protein 48 Zostera marina
TI:29655 None
 
A0A1U7Z5G4_NELNU
euHCVdb»
0.0
LOC104591408 RNA-binding protein 48 Nelumbo nucifera
TI:4432 None
   
A0A1U8PY67_NELNU
euHCVdb»
0.0
LOC104586909 RNA-binding protein 48 Nelumbo nucifera
TI:4432 None
   
A0A251T295_HELAN
euHCVdb»
0.0
HannXRQ_Chr12g0371541 RNA-binding protein 48 Helianthus annuus
TI:4232 None
 
A0A2I4DDN3_JUGRE
euHCVdb»
0.0
LOC108979102 RNA-binding protein 48 Juglans regia
TI:51240 None
   
A0A2K1J8H4_PHYPA
EnsemblPlants»
0.0
LOC112293163 RNA-binding protein 48 Physcomitrium patens
TI:3218 None
 
A0A2R6X8X7_MARPO
euHCVdb»
0.0
MARPO_0029s0094 RNA-binding protein 48 Marchantia polymorpha
TI:3197 None
 
A0A3B6ASE2_WHEAT
EnsemblPlants»
0.0
LOC123184823 RNA-binding protein 48 Triticum aestivum
TI:4565 None
   
A0A3B6C0Z1_WHEAT
EnsemblPlants»
0.0
RNA-binding protein 48 Triticum aestivum
TI:4565 None
   
A0A3B6D7F8_WHEAT
EnsemblPlants»
0.0
LOC123051694 RNA-binding protein 48 Triticum aestivum
TI:4565 None
   
A0A3B6NHH6_WHEAT
EnsemblPlants»
0.0
LOC123131644 RNA-binding protein 48 Triticum aestivum
TI:4565 None
   
A0A3B6PDD9_WHEAT
EnsemblPlants»
0.0
LOC123133173 RNA-binding protein 48 Triticum aestivum
TI:4565 None
   
A0A3B6QBH4_WHEAT
EnsemblPlants»
0.0
LOC123143023 RNA-binding protein 48 Triticum aestivum
TI:4565 None
   
A0A3Q7HPI0_SOLLC
EnsemblPlants»
0.0
LOC101251605 RNA-binding protein 48 Solanum lycopersicum
TI:4081 None
   
A0A7D9NKN3_XENTR
Xenbase»
0.0
rbm48 RNA-binding protein 48 Xenopus tropicalis
TI:8364 None
   
A0A7M7N2H8_STRPU
EnsemblMetazoa»
0.0
RNA-binding protein 48 Strongylocentrotus purpuratus
TI:7668 None
   
A0A7M7P5E2_STRPU
EnsemblMetazoa»
0.0
RNA-binding protein 48 Strongylocentrotus purpuratus
TI:7668 None
   
A0A804HP92_MUSAM
EnsemblPlants»
0.0
RNA-binding protein 48 Musa acuminata
TI:4641 None
   
A0A8I6XPR2_HORVV
EnsemblPlants»
0.0
LOC123402874 RNA-binding protein 48 Hordeum vulgare
TI:4513 None
   
A0A8I7B524_HORVV
EnsemblPlants»
0.0
LOC123429530 RNA-binding protein 48 Hordeum vulgare
TI:4513 None
   
A0A9J7N419_BRAFL
euHCVdb»
0.0
LOC118424411 RNA-binding protein 48 Branchiostoma floridae
TI:7739 None
   
A0A9K3MWA0_HELAN
euHCVdb»
0.0
HanXRQr2_Chr12g0544091 RNA-binding protein 48 Helianthus annuus
TI:4232 None
 
A0ABM2ZKY2_GOSHI
euHCVdb»
0.0
LOC107920956 RNA-binding protein 48 Gossypium hirsutum
TI:3635 None
   
A0ABM3A017_GOSHI
euHCVdb»
0.0
LOC121216842 RNA-binding protein 48 Gossypium hirsutum
TI:3635 None
   
A0ABM3AKI1_GOSHI
euHCVdb»
0.0
LOC121220147 RNA-binding protein 48 Gossypium hirsutum
TI:3635 None
   
A0ABM3BIJ5_GOSHI
euHCVdb»
0.0
LOC107916836 RNA-binding protein 48 Gossypium hirsutum
TI:3635 None
   
B9HPX6_POPTR
euHCVdb»
0.0
POPTR_009G167600 RNA-binding protein 48 Populus trichocarpa
TI:3694 None
 
B9SH88_RICCO
euHCVdb»
0.0
RCOM_0527840 RNA-binding protein 48 Ricinus communis
TI:3988 None
 
C5XRJ3_SORBI
euHCVdb»
0.0
SORBI_3004G004100 RNA-binding protein 48 Sorghum bicolor
TI:4558 None
 
D7TDI3_VITVI
euHCVdb»
0.0
VIT_01s0127g00370 RNA-binding protein 48 Vitis vinifera
TI:29760 None
 
E9HI69_DAPPU
euHCVdb»
0.0
DAPPUDRAFT_301410 RNA-binding protein 48 Daphnia pulex
TI:6669 None
 
G7KG19_MEDTR
EnsemblPlants»
0.0
11435370 RNA-binding protein 48 Medicago truncatula
TI:3880 None
 
H2M5S1_ORYLA
Ensembl»
0.0
rbm48 RNA-binding protein 48 Oryzias latipes
TI:8090 None
   
I1HW45_BRADI
EnsemblPlants»
0.0
LOC100835948 RNA-binding protein 48 Brachypodium distachyon
TI:15368 None
 
K3YVJ5_SETIT
EnsemblPlants»
0.0
LOC101767223 RNA-binding protein 48 Setaria italica
TI:4555 None
 
K7LT47_SOYBN
EnsemblPlants»
0.0
LOC100527829 RNA-binding protein 48 Glycine max
TI:3847 None
 
M1D774_SOLTU
EnsemblPlants»
0.0
LOC102581457 RNA-binding protein 48 Solanum tuberosum
TI:4113 None
   
M4D690_BRACM
EnsemblPlants»
0.0
RNA-binding protein 48 Brassica campestris
TI:3711 None
   
M5WH91_PRUPE
euHCVdb»
0.0
PRUPE_4G221000 RNA-binding protein 48 Prunus persica
TI:3760 None
 
Q6YPG3_ORYSJ
euHCVdb»
0.0
OJA1212_C06.21-1 RNA-binding protein 48 Oryza sativa
TI:4530 None
 
RBM48_BOVIN
Ensembl»
0.0
RBM48 RNA-binding protein 48 Bos taurus
TI:9913 None
 
RBM48_DANRE
ZFIN»
0.0
rbm48 RNA-binding protein 48 Danio rerio
TI:7955 None
 
W1P452_AMBTC
euHCVdb»
0.0
AMTR_s00096p00065500 RNA-binding protein 48 Amborella trichopoda
TI:13333 None
 
W5MXI0_LEPOC
Ensembl»
0.0
RNA-binding protein 48 Lepisosteus oculatus
TI:7918 None
 
A0A2I3RX99_PANTR
Ensembl»
0.0
RNA-binding protein 48 Pan troglodytes
TI:9598 None
 
A0A6I8PKG9_ORNAN
Ensembl»
0.0
RNA-binding protein 48 Ornithorhynchus anatinus
TI:9258 None
   
A0ABI7WNM1_FELCA
Ensembl»
0.0
RBM48 RNA-binding protein 48 Felis catus
TI:9685 None
   
A7ST14_NEMVE
euHCVdb»
0.0
NEMVEDRAFT_v1g130539 RNA-binding protein 48 Nematostella vectensis
TI:45351 None
 
B6SH26_MAIZE
EnsemblPlants»
0.0
LOC100280490 RNA-binding protein 48 Zea mays
TI:4577 None
 
G3SIL7_GORGO
Ensembl»
0.0
LOC101141112 RNA-binding protein 48 Gorilla gorilla
TI:9593 None
 
H2XWR1_CIOIN
Ensembl»
0.0
RNA-binding protein 48 Ciona intestinalis
TI:7719 None
 
A0A9R0I509_SPIOL
euHCVdb»
0.0
LOC110782972 Uncharacterized protein LOC110782972 Spinacia oleracea
TI:3562 None
   
T1FTN6_HELRO
EnsemblMetazoa»
0.0
20212183 RNA-binding protein 48 Helobdella robusta
TI:6412 None
 
A0A1S4GJN1_ANOGA
EnsemblMetazoa»
0.0
Uncharacterized protein Anopheles gambiae
TI:7165 None
 
A0A9R1UGQ2_LACSA
euHCVdb»
0.0
LSAT_V11C900504570 Uncharacterized protein Lactuca sativa
TI:4236 None
 
A8DYB1_DROME
FlyBase»
0.0
Dmel\CG34231 RNA-binding protein 48 Drosophila melanogaster
TI:7227 None
 
M4D691_BRACM
EnsemblPlants»
0.0
RNA-binding protein 48 Brassica campestris
TI:3711 None
   
U5G8C6_POPTR
euHCVdb»
0.0
POPTR_006G221300 RRM domain-containing protein Populus trichocarpa
TI:3694 None
 
A0A0R0HG95_SOYBN
EnsemblPlants»
0.0
GLYMA_11G125900 Uncharacterized protein Glycine max
TI:3847 None 		 
 
A0A2G2YXJ8_CAPAN
euHCVdb»
0.0
T459_21720 RNA-binding protein 48 Capsicum annuum
TI:4072 None 		 
 
D8QVG9_SELML
euHCVdb»
0.0
SELMODRAFT_112525 SELMODRAFT_78456 RRM domain-containing protein Selaginella moellendorffii
TI:88036 None 		 
 
H3GTC0_PHYRM
EnsemblProtists»
0.0
Uncharacterized protein Phytophthora ramorum
TI:164328 None