Collated Gene Ontology terms

Biological process: nucleic acid binding(2023) RNA-DNA hybrid ribonuclease activity(2023)

Molecular function: microtubule-based process2013, 2017, 2023 rhythmic process2023 regulation of circadian rhythm2003, 2019 regulation of heme biosynthetic process2019 red, far-red light phototransduction2003, 2023 red or far-red light signaling pathway2003, 2023 heme biosynthetic process2023 circadian rhythm2003, 2004 DNA damage response2023 DNA replication checkpoint signaling2023

Cellular component: cytoplasm2003, 2004, 2017, 2019, 2023 nucleus2004, 2009, 2017, 2023 microtubule2023 cytosol2009 cytoskeleton2023

Phylogenetic distribution

Chordates: 18/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 2/3 
Arthropods: 4/5 
Tardigrades: 0/0 
Placozoa: 0/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 9/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 1/4 
Hacrobia: 0/0 
Plants: 36/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2012 2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 0 2 4 6 8 10 Knownness

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
A0A3B5XVM9_WHEAT
EnsemblPlants»
0.0
SRR1-like domain-containing protein Triticum aestivum
TI:4565 None
   
A0A3Q7GRM5_SOLLC
EnsemblPlants»
0.0
RNase H type-1 domain-containing protein Solanum lycopersicum
TI:4081 None
   
A0A3Q7H9Y4_SOLLC
EnsemblPlants»
0.0
SRR1-like domain-containing protein Solanum lycopersicum
TI:4081 None 		     
A0A3Q7IPS8_SOLLC
EnsemblPlants»
0.0
SRR1-like domain-containing protein Solanum lycopersicum
TI:4081 None
   
A0A6I8P608_ORNAN
Ensembl»
0.0
SRR1-like domain-containing protein Ornithorhynchus anatinus
TI:9258 None
   
A0A7I4CPF8_PHYPA
EnsemblPlants»
0.0
SRR1-like domain-containing protein Physcomitrium patens
TI:3218 None
 
A0A7M7T1V5_STRPU
EnsemblMetazoa»
0.0
SRR1-like domain-containing protein Strongylocentrotus purpuratus
TI:7668 None
   
F2E1Z0_HORVV
EnsemblPlants»
0.0
Predicted protein Hordeum vulgare
TI:4513 None 		 
 
K4D4D1_SOLLC
EnsemblPlants»
0.0
RNase H type-1 domain-containing protein Solanum lycopersicum
TI:4081 None
   
K4D4D7_SOLLC
EnsemblPlants»
0.0
RNase H type-1 domain-containing protein Solanum lycopersicum
TI:4081 None
   
M1A628_SOLTU
EnsemblPlants»
0.0
Protein SENSITIVITY TO RED LIGHT REDUCED Solanum tuberosum
TI:4113 None
   
M1A660_SOLTU
EnsemblPlants»
0.0
Protein SENSITIVITY TO RED LIGHT REDUCED Solanum tuberosum
TI:4113 None
   
M1ALB8_SOLTU
EnsemblPlants»
0.0
Protein SENSITIVITY TO RED LIGHT REDUCED Solanum tuberosum
TI:4113 None
   
M1DIH1_SOLTU
EnsemblPlants»
0.0
Protein SENSITIVITY TO RED LIGHT REDUCED Solanum tuberosum
TI:4113 None
   
M1DQW4_SOLTU
EnsemblPlants»
0.0
Protein SENSITIVITY TO RED LIGHT REDUCED Solanum tuberosum
TI:4113 None
   
W5MQ88_LEPOC
Ensembl»
0.0
SRR1 domain containing Lepisosteus oculatus
TI:7918 None
 
B6U8Z8_MAIZE
EnsemblPlants»
0.0
100285750 SRR1-like protein Zea mays
TI:4577 None 		 
 
I1LLC3_SOYBN
EnsemblPlants»
0.0
100798856 SRR1-like domain-containing protein Glycine max
TI:3847 None
 
K7KTW1_SOYBN
EnsemblPlants»
0.0
100812408 SRR1-like domain-containing protein Glycine max
TI:3847 None
 
I1HMG9_BRADI
EnsemblPlants»
0.0
100844974 SRR1-like domain-containing protein Brachypodium distachyon
TI:15368 None
 
M1A661_SOLTU
EnsemblPlants»
0.0
102602845 Protein SENSITIVITY TO RED LIGHT REDUCED Solanum tuberosum
TI:4113 None
   
A0A804KRB4_MUSAM
EnsemblPlants»
0.0
103999862 (wild Malaysian banana) hypothetical protein Musa acuminata
TI:4641 None 		 
 
K4D4D6_SOLLC
EnsemblPlants»
0.0
104644443 SRR1-like domain-containing protein Solanum lycopersicum
TI:4081 None
   
G7IYV5_MEDTR
EnsemblPlants»
0.0
11419761 Putative sensitivity To Red Light Reduced-like,
SRR1 (Sensitivity TO RED LIGHT reduced protein)		 Medicago truncatula
TI:3880 None
 
Q7QCK3_ANOGA
EnsemblMetazoa»
0.0
1273292 AGAP002668-PA Anopheles gambiae
TI:7165 None
 
T1G3E5_HELRO
EnsemblMetazoa»
0.0
20215593 SRR1-like domain-containing protein Helobdella robusta
TI:6412 None 		 
 
B7PFR4_IXOSC
EnsemblMetazoa»
0.0
8052015 SRR1-like domain-containing protein Ixodes scapularis
TI:6945 None
 
Q757C9_ASHGO
EnsemblFungi»
0.0
AGOS_AER084W AER084Wp Ashbya gossypii
TI:33169 None
 
U5CNZ7_AMBTC
EnsemblPlants»
0.0
AMTR_s00032p00165380 SRR1-like domain-containing protein Amborella trichopoda
TI:13333 None
 
F4NTM7_BATDJ
EnsemblBacteria»
0.0
BATDEDRAFT_22312 SRR1-like domain-containing protein Batrachochytrium dendrobatidis
TI:109871 None 		 
 
SRR1L_YEAST
SGD»
1.3
BER1 SRR1-like protein BER1
(Benomyl resistant protein 1)		 Saccharomyces cerevisiae
TI:4932 None
 
A0A078IUC9_BRANA
EnsemblPlants»
0.0
BnaA02g07010D (rape) hypothetical
protein (BnaA02g07010D protein)		 Brassica napus
TI:3708 None
 
A0A078H6M2_BRANA
EnsemblPlants»
0.0
BnaA10g12530D BnaA10g12530D protein Brassica napus
TI:3708 None
 
A0A078IHS6_BRANA
EnsemblPlants»
0.0
BnaC02g09900D BnaC02g09900D protein Brassica napus
TI:3708 None
 
Q5A4X6_CANAL
EnsemblFungi»
0.0
CAALFM_C500250CA orf19.8585 SRR1-like domain-containing protein Candida albicans
TI:5476 None
 
A0A3B5ZNP3_WHEAT
EnsemblPlants»
0.0
CFC21_010215 SRR1-like domain-containing protein Triticum aestivum
TI:4565 None
 
SRR1L_DROME
FlyBase»
1.0
CG7988 SRR1-like protein Drosophila melanogaster
TI:7227 None
 
A0A2K3D9D0_CHLRE
EnsemblPlants»
0.0
CHLRE_10g423700v5 SRR1-like domain-containing protein Chlamydomonas reinhardtii
TI:3055 None
 
A0A067ETY3_CITSI
Ensembl»
0.0
CISIN_1g023803mg SRR1-like domain-containing protein Citrus sinensis
TI:2711 None
 
A8WJK4_CAEBR
WormBase»
0.0
Cbr-mrpl-46 Protein CBR-MRPL-46 Caenorhabditis briggsae
TI:6238 None
 
A0A0A0KRU2_CUCSA
EnsemblPlants»
0.0
Csa_5G457240 SRR1-like domain-containing protein Cucumis sativus
TI:3659 None
 
E9FTR7_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_220555 SRR1-like domain-containing protein Daphnia pulex
TI:6669 None
 
Q555C0_DICDI
dictyBase»
0.5
DDB_G0274921 SRR1-like domain-containing protein Dictyostelium discoideum
TI:44689 None
 
F0ZUB3_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_38359 SRR1-like domain-containing protein Dictyostelium purpureum
TI:5786 None
 
A0A059BIL9_EUCGR
EnsemblPlants»
0.0
EUGRSUZ_G03239 SRR1-like domain-containing protein Eucalyptus grandis
TI:71139 None
 
A0A9K3NJD1_HELAN
EnsemblPlants»
0.0
HanXRQr2_Chr06g0251121 SRR1-like protein Helianthus annuus
TI:4232 None 		 
 
A0A251UHT5_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr06g0173441 SRR1-like domain-containing protein Helianthus annuus
TI:4232 None
 
A0A1Y1IBY3_KLENI
EnsemblPlants»
0.0
KFL_003210050 SRR1-like domain-containing protein Klebsormidium nitens
TI:105231 None
 
A0A1U7Z3W7_NELNU
EnsemblBacteria»
0.0
LOC104590052 Protein SENSITIVITY TO RED LIGHT REDUCED 1 Nelumbo nucifera
TI:4432 None
 
A0A1S3WYH0_TOBAC
EnsemblFungi»
0.0
LOC107759352 Protein SENSITIVITY TO RED LIGHT REDUCED 1-like Nicotiana tabacum
TI:4097 None
   
A0A1S3XPS4_TOBAC
EnsemblFungi»
0.0
LOC107767249 Protein SENSITIVITY TO RED LIGHT REDUCED 1-like Nicotiana tabacum
TI:4097 None
   
A0A1S3YNM2_TOBAC
EnsemblFungi»
0.0
LOC107778040 Protein SENSITIVITY TO RED LIGHT REDUCED 1-like Nicotiana tabacum
TI:4097 None
   
A0A1S4DA38_TOBAC
EnsemblFungi»
0.0
LOC107827450 Protein SENSITIVITY TO RED LIGHT REDUCED 1-like Nicotiana tabacum
TI:4097 None
   
A0A1S4DLS4_TOBAC
EnsemblFungi»
0.0
LOC107831141 Uncharacterized protein LOC107831141 Nicotiana tabacum
TI:4097 None
   
A0A1S4DLR4_TOBAC
EnsemblFungi»
0.0
LOC107831142 Protein SENSITIVITY TO RED LIGHT REDUCED 1-like Nicotiana tabacum
TI:4097 None
   
A0A1S4DMH2_TOBAC
EnsemblFungi»
0.0
LOC107831143 Uncharacterized protein LOC107831143 Nicotiana tabacum
TI:4097 None
   
A0A1U8KB77_GOSHI
Ensembl»
0.0
LOC107915127 Protein SENSITIVITY TO RED LIGHT REDUCED 1-like Gossypium hirsutum
TI:3635 None
   
A0A1U8KGD1_GOSHI
Ensembl»
0.0
LOC107915133 Protein SENSITIVITY TO RED LIGHT REDUCED 1-like Gossypium hirsutum
TI:3635 None
   
A0A2I4GZX1_JUGRE
EnsemblPlants»
0.0
LOC109012327 Protein SENSITIVITY TO RED LIGHT REDUCED 1-like Juglans regia
TI:51240 None
 
A0A9J7HH75_BRAFL
CTD»
0.0
LOC118404434 SRR1-like protein Branchiostoma floridae
TI:7739 None 		     
A0A2C9W312_MANES
EnsemblPlants»
0.0
MANES_04G160200 SRR1-like domain-containing protein Manihot esculenta
TI:3983 None
 
A0A2R6XMT9_MARPO
EnsemblPlants»
0.0
MARPO_0008s0158 SRR1-like domain-containing protein Marchantia polymorpha
TI:3197 None
 
A0A022RR27_ERYGU
Ensembl»
0.0
MIMGU_mgv1a011643mg SRR1-like domain-containing protein Erythranthe guttata
TI:4155 None
 
A9UWG8_MONBE
EnsemblProtists»
0.0
MONBRDRAFT_7276 SRR1-like domain-containing protein Monosiga brevicollis
TI:81824 None
 
A7RV76_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g202639 SRR1-like domain-containing protein Nematostella vectensis
TI:45351 None
 
A0A0P0VJ47_ORYSJ
EnsemblPlants»
0.0
Os02g0484390 Os02g0484390 protein Oryza sativa
TI:4530 None
 
A0A0P0WE80_ORYSJ
EnsemblPlants»
0.0
Os04g0588900 Os04g0588900 protein Oryza sativa
TI:4530 None
 
A0A0P0WE06_ORYSJ
EnsemblPlants»
0.0
Os04g0589000 Os04g0589000 protein Oryza sativa
TI:4530 None
 
Q5W7C4_ORYSJ
EnsemblPlants»
0.0
Os05g0118000 Os05g0118000 protein Oryza sativa
TI:4530 None
 
O96208_PLAF7
EnsemblProtists»
0.0
PF3D7_0212700 SRR1-like protein Plasmodium falciparum
TI:5833 None
 
A9U3I6_PHYPA
EnsemblPlants»
0.0
PHYPA_016219 SRR1-like domain-containing protein Physcomitrium patens
TI:3218 None
 
B9GM13_POPTR
EnsemblPlants»
0.0
POPTR_001G026700 SRR1-like domain-containing protein Populus trichocarpa
TI:3694 None
 
A0A2K2B9T4_POPTR
EnsemblPlants»
0.0
POPTR_003G198000 SRR1-like domain-containing protein Populus trichocarpa
TI:3694 None
 
M5VQP0_PRUPE
EnsemblPlants»
0.0
PRUPE_7G009600 SRR1-like domain-containing protein Prunus persica
TI:3760 None
 
B9S4K4_RICCO
EnsemblBacteria»
0.0
RCOM_0809580 Protein SENSITIVITY TO
RED LIGHT REDUCED, putative		 Ricinus communis
TI:3988 None
 
B9RGB6_RICCO
EnsemblBacteria»
0.0
RCOM_1452690 Leucine-rich repeat-containing protein, putative Ricinus communis
TI:3988 None
 
D8SYN6_SELML
EnsemblPlants»
0.0
SELMODRAFT_128008 SRR1-like domain-containing protein Selaginella moellendorffii
TI:88036 None
 
K3YCN3_SETIT
EnsemblPlants»
0.0
SETIT_7G216800v2 SRR1-like domain-containing protein Setaria italica
TI:4555 None
 
B6JZM7_SCHJY
EnsemblFungi»
0.0
SJAG_02069 SRR1 family protein Schizosaccharomyces japonicus
TI:4897 None
 
A0A1W0W163_SORBI
EnsemblPlants»
0.0
SORBI_3003G402200 SRR1-like domain-containing protein Sorghum bicolor
TI:4558 None
 
A0A1Z5RDV6_SORBI
EnsemblPlants»
0.0
SORBI_3006G141300 SRR1-like domain-containing protein Sorghum bicolor
TI:4558 None
 
A0A1Z5REP3_SORBI
EnsemblPlants»
0.0
SORBI_3006G195900 SRR1-like domain-containing protein Sorghum bicolor
TI:4558 None
 
SRR1L_SCHPO
PomBase»
2.1
SPBC14C8.13 SRR1-like protein Schizosaccharomyces pombe
TI:4896 None
 
A0A251T109_HELAN
EnsemblPlants»
0.0
SRR1 Putative sensitivity to red light
reduced protein (SRR1) (SRR1-like protein)		 Helianthus annuus
TI:4232 None
 
D8S6P5_SELML
EnsemblPlants»
0.0
SRR1 Uncharacterized protein SRR1 Selaginella moellendorffii
TI:88036 None
 
SRR1_ARATH
TAIR»
3.2
SRR1 Protein SENSITIVITY TO RED LIGHT REDUCED 1 Arabidopsis thaliana
TI:3702 None
 
A0A1B1XWM6_WHEAT
EnsemblPlants»
0.0
SRR1-B1 Sensitivity to red light reduced 1-B1 Triticum aestivum
TI:4565 None
 
A0A5F8HH81_MONDO
Ensembl»
0.0
SRRD SRR1 domain containing Monodelphis domestica
TI:13616 None
   
A0A5G2QZZ9_PIG
Ensembl»
0.0
SRRD SRR1 domain containing Sus scrofa
TI:9823 None
   
A0A8I3Q830_CANLF
Ensembl»
0.0
SRRD SRR1 domain containing Canis lupus
TI:9612 None 		     
A0A8V0ZTH2_CHICK
Ensembl»
0.0
SRRD SRR1 domain containing Gallus gallus
TI:9031 None 		     
E1BFS3_BOVIN
Ensembl»
0.0
SRRD SRR1 domain containing Bos taurus
TI:9913 None
   
F7F0S2_MACMU
Ensembl»
0.0
SRRD SRR1 domain containing Macaca mulatta
TI:9544 None
   
G3QQM6_GORGO
Ensembl»
0.0
SRRD SRR1 domain containing Gorilla gorilla
TI:9593 None 		 
 
H2QLE7_PANTR
Ensembl»
0.0
SRRD SRR1 domain containing Pan troglodytes
TI:9598 None 		 
 
M3WDS6_FELCA
Ensembl»
0.0
SRRD SRR1 domain containing Felis catus
TI:9685 None
 
SRR1L_HUMAN
Ensembl»
1.5
SRRD SRR1-like protein
(SRR1 domain-containing protein)		 Homo sapiens
TI:9606 None
 
A0A8I6AKY0_RAT
RGD»
1.0
Srrd SRR1 domain containing Rattus norvegicus
TI:10116 None
   
SRR1L_MOUSE
Ensembl»
2.1
Srrd SRR1-like protein
(SRR1 domain-containing protein)		 Mus musculus
TI:10090 None
 
A0A1U8FAA0_CAPAN
EnsemblPlants»
0.0
T459_30006 Protein SENSITIVITY TO RED LIGHT REDUCED 1 Capsicum annuum
TI:4072 None
 
A0A1U8F2R8_CAPAN
EnsemblPlants»
0.0
T459_30026 SRR1-like domain-containing protein Capsicum annuum
TI:4072 None
 
A0A1U8F2B4_CAPAN
EnsemblPlants»
0.0
T459_30027 SRR1-like domain-containing protein Capsicum annuum
TI:4072 None
 
A0A061FGX3_THECC
EnsemblPlants»
0.0
TCM_032315 Sensitivity to red light reduced 1 Theobroma cacao
TI:3641 None
 
A0A061F8P0_THECC
EnsemblPlants»
0.0
TCM_032317 Sensitivity to red light reduced 1 Theobroma cacao
TI:3641 None
 
A0A061FS11_THECC
EnsemblPlants»
0.0
TCM_045259 Sensitivity to red light
reduced protein (SRR1), putative		 Theobroma cacao
TI:3641 None
 
A0A0D1CNK4_USTMA
EnsemblFungi»
0.0
UMAG_03835 SRR1-like domain-containing protein Ustilago maydis
TI:5270 None
 
A0A8R1YBC8_PRIPA
EnsemblMetazoa»
0.0
WBGene00106101 SRR1-like domain-containing protein Pristionchus pacificus
TI:54126 None 		     
Q6CES0_YARLI
EnsemblFungi»
0.0
YALI0_B13486g YALI0B13486p Yarrowia lipolytica
TI:4952 None
 
A0A0K9PEL6_ZOSMR
EnsemblPlants»
0.0
ZOSMA_28G00030 SRR1-like domain-containing protein Zostera marina
TI:29655 None
 
A0A0K9P2P9_ZOSMR
EnsemblPlants»
0.0
ZOSMA_45G00660 SRR1-like domain-containing protein Zostera marina
TI:29655 None
 
A0A0K9P0M0_ZOSMR
EnsemblPlants»
0.0
ZOSMA_45G00750 Sensitivity to red light reduced protein (SRR1) Zostera marina
TI:29655 None
 
A0A3B3IAW7_ORYLA
Ensembl»
0.0
srrd SRR1 domain containing Oryzias latipes
TI:8090 None
   
A0A6I8PSV1_XENTR
Ensembl»
0.0
srrd SRR1 domain containing (SRR1-like protein) Xenopus tropicalis
TI:8364 None 		     
A0A8M2BJQ4_DANRE
CTD»
0.0
srrd SRR1-like protein isoform X1 Danio rerio
TI:7955 None