Collated Gene Ontology terms

Biological process: SNARE binding(2016, 2020, 2024) mRNA binding(2020, 2024)

Molecular function: endocytic recycling2015, 2016, 2020, 2024 retrograde transport, endosome to Golgi2015, 2024 protein transport2024 positive regulation of locomotion involved in locomotory behavior2016, 2024 positive regulation of dense core granule transport2016, 2024

Cellular component: EARP complex2015, 2016, 2020, 2024 cytosol2024 recycling endosome2015, 2016, 2020, 2024 membrane2014, 2020, 2024 endosome2016, 2024 perinuclear region of cytoplasm2016, 2024 extracellular exosome2013 GARP complex2017

Phylogenetic distribution

Chordates: 21/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 1/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 2/4 
Harosa: 3/4 
Hacrobia: 0/0 
Plants: 35/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
VPS50_HUMAN
Ensembl»
4.8
VPS50 Syndetin (Coiled-coil domain-containing protein
132) (EARP/GARPII complex subunit VPS50)		 Homo sapiens
TI:9606 None
 
VPS50_MOUSE
Ensembl»
2.8
Vps50 Syndetin (Bcl2-like protein blm) (Coiled-coil domain-containing
protein 132) (EARP/GARPII complex subunit VPS50)		 Mus musculus
TI:10090 None
 
Q8RXC2_ARATH
TAIR»
0.8
At2g27890 At2g27890:At2g27900:At2g27910 At2g27900 At2g27910 At2g27890 (Coiled-coil protein)
(Uncharacterized protein At2g27890:At2g27900:At2g27910)		 Arabidopsis thaliana
TI:3702 None
 
VPS50_RAT
RGD»
3.5
Vps50 Syndetin (Coiled-coil domain-containing protein
132) (EARP/GARPII complex subunit VPS50)		 Rattus norvegicus
TI:10116 None
 
A1ZAY8_DROME
FlyBase»
1.5
Vps50 FI23003p1 (Vacuolar protein sorting 50) Drosophila melanogaster
TI:7227 None
 
Q18602_CAEEL
WormBase»
4.2
vps-50 Vps54_N domain-containing protein Caenorhabditis elegans
TI:6239 None
 
Q54MU4_DICDI
dictyBase»
1.0
DDB_G0285655 Exocyst complex component Sec8 Dictyostelium discoideum
TI:44689 None
 
Q54NV0_DICDI
dictyBase»
1.0
DDB_G0284973 Exocyst complex component Sec8 Dictyostelium discoideum
TI:44689 None
 
VPS50_CHICK
Ensembl»
2.0
VPS50 Syndetin (Coiled-coil domain-containing protein
132) (EARP/GARPII complex subunit VPS50)		 Gallus gallus
TI:9031 None
 
A0A8M6Z2H2_DANRE
CTD»
1.0
si:ch211-287b5.1 Syndetin isoform X1 Danio rerio
TI:7955 None