Collated Gene Ontology terms

Biological process: endonuclease activity(2024) tRNA-intron endonuclease activity(2003, 2013, 2024)

Molecular function: tRNA processing2021, 2024 tRNA-type intron splice site recognition and cleavage2017, 2024 tRNA splicing, via endonucleolytic cleavage and ligation2009, 2024 mRNA processing2024 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021 brain morphogenesis2011

Cellular component: tRNA-intron endonuclease complex2013, 2017, 2024 mitochondrial outer membrane2004, 2013, 2018, 2024 nucleus2024 nucleolus2024 mitochondrion2018, 2024 nucleoplasm2015 mitochondrial membrane2009 membrane2024 endomembrane system2024

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 2/3 
Arthropods: 3/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 14/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 2/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
A0A8M9PNE7_DANRE
CTD»
1.3
tsen54 tRNA-splicing endonuclease subunit
Sen54 isoform X1		 Danio rerio
TI:7955 None
   
A0A8V1AEY4_CHICK
Ensembl»
0.0
TSEN54 tRNA splicing endonuclease subunit 54 Gallus gallus
TI:9031 None
   
D3ZZT6_RAT
RGD»
1.0
Tsen54 tRNA splicing endonuclease subunit 54 Rattus norvegicus
TI:10116 None
   
F4J8D6_ARATH
TAIR»
0.0
At3g02370 tRNA-splicing endonuclease subunit Arabidopsis thaliana
TI:3702 None
 
Q54ND7_DICDI
dictyBase»
0.5
DDB_G0285335 tRNA-splicing endonuclease subunit
Sen54 N-terminal domain-containing protein		 Dictyostelium discoideum
TI:44689 None
 
Q6DBN3_ARATH
TAIR»
0.0
At3g57360 At3g57360 (tRNA-splicing endonuclease subunit) Arabidopsis thaliana
TI:3702 None
 
Q9TXV5_CAEEL
WormBase»
0.5
tsen-54 tRNA-splicing endonuclease subunit
Sen54 N-terminal domain-containing protein		 Caenorhabditis elegans
TI:6239 None
 
Q9VTV4_DROME
FlyBase»
1.3
Tsen54 tRNA splicing endonuclease subunit 54 Drosophila melanogaster
TI:7227 None
 
SEN54_HUMAN
Ensembl»
1.3
TSEN54 tRNA-splicing endonuclease subunit Sen54 (SEN54
homolog) (HsSEN54) (tRNA-intron endonuclease Sen54)		 Homo sapiens
TI:9606 None
 
SEN54_MOUSE
Ensembl»
0.0
Tsen54 tRNA-splicing endonuclease subunit
Sen54 (tRNA-intron endonuclease Sen54)		 Mus musculus
TI:10090 None
 
SEN54_SCHPO
PomBase»
1.0
sen54 Probable tRNA-splicing endonuclease subunit
sen54 (tRNA-intron endonuclease sen54)		 Schizosaccharomyces pombe
TI:4896 None
 
SEN54_YEAST
SGD»
2.1
SEN54 tRNA-splicing endonuclease subunit SEN54 (Splicing endonuclease
of 54 kDa) (tRNA-intron endonuclease SEN54)		 Saccharomyces cerevisiae
TI:4932 None