Collated Gene Ontology terms

Biological process: peptidoglycan binding(2023, 2024) metal ion binding(2024)

Molecular function: Golgi organization2019, 2020, 2024 regulation of apoptotic process2024 protein ubiquitination2024 negative regulation of peptidoglycan recognition protein signaling pathway2023 negative regulation of inflammatory response2017 negative regulation of T cell activation2017 innate immune response2024

Cellular component: Golgi apparatus2019, 2023, 2024 membrane2024 plasma membrane2019, 2024 Golgi membrane2023, 2024 nucleoplasm2023, 2024 cytoplasm2017

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 6/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 2/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
LYSM3_RAT
RGD»
2.0
Lysmd3 LysM and putative
peptidoglycan-binding domain-containing protein 3		 Rattus norvegicus
TI:10116 None
 
LYSM3_HUMAN
Ensembl»
2.1
LYSMD3 LysM and putative
peptidoglycan-binding domain-containing protein 3		 Homo sapiens
TI:9606 None
 
LYSM3_MOUSE
Ensembl»
0.5
Lysmd3 LysM and putative
peptidoglycan-binding domain-containing protein 3		 Mus musculus
TI:10090 None
 
LYSM3_CHICK
CTD»
1.0
LYSMD3 LysM and putative
peptidoglycan-binding domain-containing protein 3		 Gallus gallus
TI:9031 None
 
LYSM3_DANRE
ZFIN»
1.0
lysmd3 LysM and putative
peptidoglycan-binding domain-containing protein 3		 Danio rerio
TI:7955 None
 
Q7K4J7_DROME
FlyBase»
1.6
Dmel\CG17985 LD36653p Drosophila melanogaster
TI:7227 None
 
A0A8V0YHE2_CHICK
Ensembl»
0.0
LYSMD3 LysM domain containing 3 Gallus gallus
TI:9031 None
   
A0A8V0Z7L5_CHICK
Ensembl»
0.0
LYSMD4 LysM domain containing 4 Gallus gallus
TI:9031 None
   
A5JYU6_CAEEL
WormBase»
0.0
lmd-1 LysM domain-containing protein Caenorhabditis elegans
TI:6239 None
 
FB60_ARATH
TAIR»
0.0
At1g55000 F-box protein At1g55000 Arabidopsis thaliana
TI:3702 None
 
LYSM1_HUMAN
Ensembl»
0.0
LYSMD1 LysM and putative
peptidoglycan-binding domain-containing protein 1		 Homo sapiens
TI:9606 None
 
LYSM1_MOUSE
Ensembl»
0.0
Lysmd1 LysM and putative
peptidoglycan-binding domain-containing protein 1		 Mus musculus
TI:10090 None
 
LYSM1_RAT
RGD»
0.0
Lysmd1 LysM and putative
peptidoglycan-binding domain-containing protein 1		 Rattus norvegicus
TI:10116 None
 
LYSM4_DANRE
ZFIN»
0.0
lysmd4 LysM and putative
peptidoglycan-binding domain-containing protein 4		 Danio rerio
TI:7955 None
 
LYSM4_HUMAN
Ensembl»
0.0
LYSMD4 LysM and putative
peptidoglycan-binding domain-containing protein 4		 Homo sapiens
TI:9606 None
 
LYSM4_MOUSE
Ensembl»
0.0
Lysmd4 LysM and putative
peptidoglycan-binding domain-containing protein 4		 Mus musculus
TI:10090 None
 
M0R4W5_RAT
RGD»
0.0
Lysmd4 LysM domain containing 4 Rattus norvegicus
TI:10116 None
   
A0A8J8XSR6_RAT
RGD»
0.0
Lysmd2 LysM domain containing 2 Rattus norvegicus
TI:10116 None 		     
A0A8V1AL94_CHICK
Ensembl»
0.0
LYSMD1 LysM domain-containing protein Gallus gallus
TI:9031 None 		     
E1C5Q2_CHICK
Ensembl»
0.0
LYSMD2 LysM domain containing 2 Gallus gallus
TI:9031 None 		     
LYSM2_DANRE
ZFIN»
0.0
lysmd2 LysM and putative
peptidoglycan-binding domain-containing protein 2		 Danio rerio
TI:7955 None 		 
 
LYSM2_HUMAN
Ensembl»
0.0
LYSMD2 LysM and putative
peptidoglycan-binding domain-containing protein 2		 Homo sapiens
TI:9606 None 		 
 
LYSM2_MOUSE
AG»
0.0
Lysmd2 LysM and putative
peptidoglycan-binding domain-containing protein 2		 Mus musculus
TI:10090 None 		 
 
O02055_CAEEL
WormBase»
0.0
lmd-2 LysM domain-containing protein Caenorhabditis elegans
TI:6239 None 		 
 
Q08CB1_DANRE
ZFIN»
0.0
zgc:153301 LysM and putative peptidoglycan-binding
domain-containing protein 1 (Zgc:153301)		 Danio rerio
TI:7955 None 		 
 
Q54BF7_DICDI
dictyBase»
0.0
DDB_G0293644 PH domain-containing protein Dictyostelium discoideum
TI:44689 None 		 
 
Q54DD6_DICDI
dictyBase»
0.0
DDB_G0292322 Peptidoglycan-binding LysM
domain-containing protein		 Dictyostelium discoideum
TI:44689 None 		 
 
Q54ND6_DICDI
dictyBase»
0.0
DDB_G0285337 LysM domain-containing protein Dictyostelium discoideum
TI:44689 None 		 
 
Q8L708_ARATH
TAIR»
0.0
At5g08200 At5g08200 (Peptidoglycan-binding LysM domain-containing
protein) (Uncharacterized protein At5g08200)		 Arabidopsis thaliana
TI:3702 None 		 
 
Q8VYP8_ARATH
TAIR»
0.0
MYJ24.12 Peptidoglycan-binding LysM domain-containing
protein (Uncharacterized protein At5g23130)		 Arabidopsis thaliana
TI:3702 None 		 
 
Q961C8_DROME
FlyBase»
0.0
red LD22649p (Red malpighian tubules, isoform B) (Red malpighian tubules, isoform
C) (Red malpighian tubules, isoform F) (Red malpighian tubules, isoform G)		 Drosophila melanogaster
TI:7227 None