Collated Gene Ontology terms

Biological process: double-stranded DNA binding(2017, 2024) 4 iron, 4 sulfur cluster binding(2023, 2024) DNA binding(2024) RNA polymerase III activity(2013, 2024) DNA-directed 5'-3' RNA polymerase activity(2003, 2004, 2005, 2024) nucleotidyltransferase activity(2024) S-adenosylmethionine-dependent methyltransferase activity(2024) metal ion binding(2024) iron-sulfur cluster binding(2024)

Molecular function: transcription by RNA polymerase III2004, 2005, 2017, 2024 positive regulation of interferon-beta production2009, 2024 positive regulation of innate immune response2009, 2024 tRNA transcription by RNA polymerase III2013, 2024 transcription initiation at RNA polymerase III promoter2017, 2024 termination of RNA polymerase III transcription2017, 2024 innate immune response2024 defense response to virus2024 retina development in camera-type eye2008 regulation of transcription by RNA polymerase III2005
regulation of DNA-templated transcription2024 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021

Cellular component: RNA polymerase III complex2003, 2004, 2013, 2014, 2017, 2023, 2024 nucleus2009, 2017, 2018, 2024 DNA-directed RNA polymerase complex2024 mitochondrion2013, 2024 nucleoplasm2004, 2013 cytosol2009, 2013 cytoplasm2018

Phylogenetic distribution

Chordates: 21/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 4/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 14/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 3/3 
Excavates: 4/4 
Harosa: 4/4 
Hacrobia: 0/0 
Plants: 35/39 
Archea: 1/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
RPC6_HUMAN
Ensembl»
4.4
POLR3F DNA-directed RNA polymerase III subunit RPC6 (RNA polymerase III subunit C6) (DNA-directed
RNA polymerase III subunit F) (RNA polymerase III 39 kDa subunit) (RPC39)		 Homo sapiens
TI:9606 None
 
RPC6_YEAST
SGD»
4.8
RPC34 DNA-directed RNA polymerase III subunit RPC6 (RNA polymerase III
subunit C6) (C34) (DNA-directed RNA polymerase III 36 kDa polypeptide)		 Saccharomyces cerevisiae
TI:4932 None
 
RPC6_MOUSE
Ensembl»
1.5
Polr3f DNA-directed RNA polymerase III subunit RPC6 (RNA polymerase
III subunit C6) (DNA-directed RNA polymerase III subunit F)		 Mus musculus
TI:10090 None
 
D3ZQ56_RAT
RGD»
2.0
Polr3f DNA-directed RNA polymerase III subunit
RPC6 (RNA polymerase III subunit C6)		 Rattus norvegicus
TI:10116 None
   
RPC6_SCHPO
PomBase»
1.0
rpc6 Probable DNA-directed RNA polymerase III subunit rpc6 (RNA polymerase III subunit C6)
(DNA-directed RNA polymerase III 34 kDa polypeptide) (RNA polymerase III subunit C34)		 Schizosaccharomyces pombe
TI:4896 None
 
RPC6_DICDI
dictyBase»
1.0
polr3f DNA-directed RNA polymerase III subunit rpc6 (RNA polymerase
III subunit C6) (DNA-directed RNA polymerase III subunit F)		 Dictyostelium discoideum
TI:44689 None
 
Q7ZTZ0_DANRE
ZFIN»
0.8
zgc:76983 DNA-directed RNA polymerase III subunit
RPC6 (RNA polymerase III subunit C6)		 Danio rerio
TI:7955 None
 
RPC6_CAEEL
WormBase»
0.0
W09C3.4 Probable DNA-directed RNA polymerase III subunit RPC6 (RNA polymerase
III subunit C6) (DNA-directed RNA polymerase III subunit F)		 Caenorhabditis elegans
TI:6239 None
 
RPC6_DROME
FlyBase»
0.0
CG5380 Probable DNA-directed RNA polymerase III subunit RPC6 (DNA-directed RNA
polymerase III subunit F) (RNA polymerase III subunit C6)		 Drosophila melanogaster
TI:7227 None
 
A0A8V0Z8C8_CHICK
Ensembl»
0.0
POLR3F DNA-directed RNA polymerase III subunit
RPC6 (RNA polymerase III subunit C6)		 Gallus gallus
TI:9031 None
   
Q9LSZ5_ARATH
TAIR»
0.0
MQM1.2 DNA-directed RNA polymerase III subunit
RPC6 (RNA polymerase III subunit C6)		 Arabidopsis thaliana
TI:3702 None