Collated Gene Ontology terms

Biological process: transcription coregulator activity(2013, 2015, 2020, 2024) DNA binding(2024) metal ion binding(2024) transcription coactivator activity(2018) DNA-binding transcription factor activity(2024)

Molecular function: regulation of transcription by RNA polymerase II2012, 2018, 2021, 2024 gastrulation2024 septin ring organization2018, 2024 positive regulation of DNA-templated transcription2021, 2024 chromatin organization2016, 2024 regulation of RNA splicing2021 regulation of DNA repair2021 positive regulation of transcription by RNA polymerase II2019 positive regulation of gluconeogenesis2019 IRE1-mediated unfolded protein response2018, 2024
transcription initiation-coupled chromatin remodeling2021 transcription elongation by RNA polymerase II2021 ribosomal large subunit export from nucleus2021 response to light stimulus2018 regulation of timing of transition from vegetative to reproductive phase2018 regulation of DNA-templated transcription2024 poly(A)+ mRNA export from nucleus2021 long-day photoperiodism, flowering2018 flower development2024 circadian rhythm2018 autophagy2024

Cellular component: SAGA complex2010, 2011, 2013, 2018, 2019, 2020, 2021, 2024 nucleus2009, 2011, 2018, 2021, 2024 cytoplasm2009, 2018, 2024 SAGA-type complex2010, 2024 membrane2024 SLIK (SAGA-like) complex2013, 2021, 2024 nuclear body2018, 2024 medial cortex septin ring2018, 2024 extracellular space2013 cytosol2009

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 1/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 9/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 1/3 
Excavates: 0/4 
Harosa: 1/4 
Hacrobia: 0/0 
Plants: 34/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
A0A8I6AIQ5_RAT
RGD»
0.0
AABR07038858.1 Family with sequence similarity 48, member B1 Rattus norvegicus
TI:10116 None
   
Q498N0_RAT
RGD»
0.0
LOC367830 Similar to FAM48A protein Rattus norvegicus
TI:10116 None
 
PHL_ARATH
TAIR»
3.2
PHL Protein PHYTOCHROME-DEPENDENT LATE-FLOWERING Arabidopsis thaliana
TI:3702 None
 
SPT20_YEAST
SGD»
4.8
SPT20 Transcription factor SPT20 Saccharomyces cerevisiae
TI:4932 None
 
A0A8V0XKQ4_CHICK
Ensembl»
0.0
SUPT20H SPT20 homolog, SAGA complex component Gallus gallus
TI:9031 None
   
SP20H_CHICK
CTD»
1.0
SUPT20H Transcription factor SPT20 homolog Gallus gallus
TI:9031 None
 
SP20H_HUMAN
Ensembl»
2.8
SUPT20H Transcription factor SPT20
homolog (p38-interacting protein) (p38IP)		 Homo sapiens
TI:9606 None
 
SP201_HUMAN
AG»
1.0
SUPT20HL1 Transcription factor SPT20 homolog-like 1 Homo sapiens
TI:9606 None
 
SP202_HUMAN
Ensembl»
1.0
SUPT20HL2 Putative transcription factor
SPT20 homolog-like 2		 Homo sapiens
TI:9606 None
 
Q9VU86_DROME
FlyBase»
2.0
Spt20 LD34837p (Spt20, isoform A) (Spt20, isoform D) Drosophila melanogaster
TI:7227 None
 
SP20H_MOUSE
Ensembl»
3.4
Supt20h Transcription factor SPT20
homolog (p38-interacting protein) (p38IP)		 Mus musculus
TI:10090 None
 
SP20H_RAT
RGD»
2.0
Supt20h Transcription factor SPT20 homolog Rattus norvegicus
TI:10116 None
 
SPT20_SCHPO
PomBase»
3.9
spt20 SAGA complex subunit spt20 Schizosaccharomyces pombe
TI:4896 None
 
F1QKI6_DANRE
ZFIN»
1.0
supt20 SPT20 homolog, SAGA complex component
(Transcription factor SPT20 homolog isoform X1)		 Danio rerio
TI:7955 None