Collated Gene Ontology terms

Biological process: RNA binding(2014, 2015, 2024) transferase activity(2024) ATP hydrolysis activity(2024) ATP binding(2024)

Molecular function: RNA processing2021, 2024 ribosomal small subunit biogenesis2023, 2024 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2013, 2021, 2024 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2013, 2024 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2013, 2024 rRNA processing2006, 2024 ribosome biogenesis2024 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021

Cellular component: nucleolus2009, 2018, 2021, 2023, 2024 nucleus2009, 2015, 2018, 2024 small-subunit processome2023, 2024 nucleoplasm2023, 2024 chromosome2023, 2024

Phylogenetic distribution

Chordates: 21/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 14/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 2/4 
Harosa: 2/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
B7P9U1_IXOSC
EnsemblMetazoa»
0.0
IscW_ISCW002056 Acidic 82 kD protein Ixodes scapularis
TI:6945 None
 
TDIF2_HUMAN
Ensembl»
1.8
DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 (Estrogen receptor-binding protein) (LPTS-interacting protein
2) (LPTS-RP2) (Terminal deoxynucleotidyltransferase-interacting factor 2) (TdIF2) (TdT-interacting factor 2)		 Homo sapiens
TI:9606 None
 
H2PZF3_PANTR
Ensembl»
0.0
DNTTIP2 Deoxynucleotidyltransferase terminal interacting protein 2
(Deoxynucleotidyltransferase, terminal, interacting protein 2)		 Pan troglodytes
TI:9598 None
 
A9PHG8_POPTR
EnsemblPlants»
0.0
POPTR_008G206400 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Populus trichocarpa
TI:3694 None
 
B6TJ58_MAIZE
EnsemblPlants»
0.0
100276831 Fcf2 pre-rRNA processing protein Zea mays
TI:4577 None
 
Q84K05_ARATH
TAIR»
0.0
At1g54770 Fcf2 pre-rRNA processing
protein (Uncharacterized protein At1g54770)		 Arabidopsis thaliana
TI:3702 None
 
TDIF2_MOUSE
Ensembl»
0.5
Dnttip2 Deoxynucleotidyltransferase terminal-interacting
protein 2		 Mus musculus
TI:10090 None
 
B6TCJ0_MAIZE
EnsemblPlants»
0.0
100276488 Fcf2 pre-rRNA processing protein Zea mays
TI:4577 None
 
FCF2_YEAST
SGD»
2.9
FCF2 rRNA-processing protein FCF2
(FAF1 copurifying factor 2)		 Saccharomyces cerevisiae
TI:4932 None
 
G7KBW9_MEDTR
EnsemblPlants»
0.0
11408252 Fcf2 pre-rRNA processing protein
(Putative Fcf2 pre-rRNA processing)		 Medicago truncatula
TI:3880 None
 
Q6YWQ2_ORYSJ
EnsemblPlants»
0.0
Os02g0730500 Os02g0730500 protein (cDNA clone:006-210-F08, full insert
sequence) (cDNA clone:J023046D09, full insert sequence)		 Oryza sativa
TI:4530 None
 
Q8STI6_DROME
FlyBase»
1.0
Dmel\CG1142 RE53401p (RE53636p) Drosophila melanogaster
TI:7227 None
 
A0A078J2A6_BRANA
EnsemblPlants»
0.0
BnaA09g51690D (rape) hypothetical
protein (BnaA09g51690D protein)		 Brassica napus
TI:3708 None
 
A0A251LTP2_MANES
EnsemblPlants»
0.0
MANES_03G211700 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Manihot esculenta
TI:3983 None
 
A0A3P5XUK4_BRACM
EnsemblPlants»
0.0
BRAA09T36143Z BRAPAZ1V2_A09P05020.2 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Brassica campestris
TI:3711 None
 
F4KCY1_ARATH
TAIR»
0.0
At5g30495 Fcf2 pre-rRNA processing protein Arabidopsis thaliana
TI:3702 None
 
I1JA57_SOYBN
EnsemblPlants»
0.0
100793132 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Glycine max
TI:3847 None
 
K3YVV4_SETIT
EnsemblPlants»
0.0
101759916 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Setaria italica
TI:4555 None
 
M5XYW9_PRUPE
EnsemblPlants»
0.0
PRUPE_1G105700 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Prunus persica
TI:3760 None
 
T1G2Z1_HELRO
EnsemblMetazoa»
0.0
20215439 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Helobdella robusta
TI:6412 None
 
A0A022S0P5_ERYGU
EnsemblFungi»
0.0
MIMGU_mgv1a012323mg Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Erythranthe guttata
TI:4155 None
 
A0A061EXA7_THECC
EnsemblPlants»
0.0
TCM_021491 Fcf2 pre-rRNA processing protein Theobroma cacao
TI:3641 None
 
A0A067FXZ4_CITSI
Ensembl»
0.0
CISIN_1g0470692mg Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Citrus sinensis
TI:2711 None
 
A0A0A0K9M7_CUCSA
EnsemblPlants»
0.0
Csa_6G094730 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Cucumis sativus
TI:3659 None
 
A0A0K9Q109_ZOSMR
EnsemblPlants»
0.0
ZOSMA_133G00520 rRNA-processing protein FCF2 Zostera marina
TI:29655 None
 
A0A1D8PL04_CANAL
EnsemblFungi»
0.0
CAALFM_C307800CA orf19.6175 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Candida albicans
TI:5476 None
 
A0A1S4HCY5_ANOGA
EnsemblMetazoa»
0.0
Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Anopheles gambiae
TI:7165 None
 
A0A1U8GQP5_CAPAN
EnsemblPlants»
0.0
T459_15246 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Capsicum annuum
TI:4072 None
 
A0A1Y1IIN8_KLENI
EnsemblPlants»
0.0
KFL_005810050 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Klebsormidium nitens
TI:105231 None
 
A0A2A6CHV7_PRIPA
EnsemblMetazoa»
0.0
WBGene00093636 Fcf2 domain-containing protein Pristionchus pacificus
TI:54126 None
 
A0A2C9UXJ7_MANES
EnsemblPlants»
0.0
MANES_11G020900 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Manihot esculenta
TI:3983 None
 
A0A2I2ZT80_GORGO
Ensembl»
0.0
Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Gorilla gorilla
TI:9593 None
 
A0A2K1K9Q8_PHYPA
EnsemblPlants»
0.0
PHYPA_009704 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Physcomitrium patens
TI:3218 None
 
A0A2R6WJ89_MARPO
EnsemblPlants»
0.0
MARPO_0084s0020 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Marchantia polymorpha
TI:3197 None
 
A0A3B6NRR9_WHEAT
EnsemblPlants»
0.0
CFC21_084326 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Triticum aestivum
TI:4565 None
 
A0A3B6PPX1_WHEAT
EnsemblPlants»
0.0
CFC21_089096 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Triticum aestivum
TI:4565 None
 
A0A3B6QHD9_WHEAT
EnsemblPlants»
0.0
CFC21_012843 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Triticum aestivum
TI:4565 None
 
A0A644F186_GIAIC
EnsemblProtists»
0.0
GL50803_009611 Fcf2 pre-rRNA processing protein Giardia intestinalis
TI:5741 None
 
A0A804IZV2_MUSAM
EnsemblPlants»
0.0
GSMUA_254270.1 (wild Malaysian banana) hypothetical protein Musa acuminata
TI:4641 None
 
A0A9K3I2R0_HELAN
EnsemblPlants»
0.0
HanXRQr2_Chr09g0362661 Fcf2 pre-rRNA processing Helianthus annuus
TI:4232 None
 
A0DPZ2_PARTE
EnsemblProtists»
0.0
GSPATT00002508001 Chromosome undetermined scaffold_6,
whole genome shotgun sequence		 Paramecium tetraurelia
TI:5888 None
 
A2FZS6_TRIV3
VEuPathDB»
0.0
TVAG_485640 Acidic 82 kDa protein, putative Trichomonas vaginalis
TI:5722 None
 
A7E4G3_SCLS1
EnsemblFungi»
0.0
SS1G_00185 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Sclerotinia sclerotiorum
TI:5180 None
 
A7SNR9_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g125169 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Nematostella vectensis
TI:45351 None
 
A8IWK7_CHLRE
EnsemblPlants»
0.0
CHLRE_03g194150v5 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Chlamydomonas reinhardtii
TI:3055 None
 
A8XRR2_CAEBR
WormBase»
0.0
CBG17763 CBG_17763 Protein CBG17763 Caenorhabditis briggsae
TI:6238 None
 
A9V1B3_MONBE
EnsemblProtists»
0.0
MONBRDRAFT_26080 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Monosiga brevicollis
TI:81824 None
 
B0G121_DICDI
dictyBase»
0.5
DDB_G0294617 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Dictyostelium discoideum
TI:44689 None
 
B3RNB2_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_53102 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Trichoplax adhaerens
TI:10228 None
 
B6K7W4_SCHJY
EnsemblFungi»
0.0
SJAG_04838 rRNA processing protein Fcf2 Schizosaccharomyces japonicus
TI:4897 None
 
B8C2N4_THAPS
EnsemblProtists»
0.0
THAPSDRAFT_34357 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Thalassiosira pseudonana
TI:35128 None
 
B9HXA3_POPTR
EnsemblPlants»
0.0
POPTR_010G002100 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Populus trichocarpa
TI:3694 None
 
B9S002_RICCO
EnsemblBacteria»
0.0
RCOM_1003610 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Ricinus communis
TI:3988 None
 
C3Y372_BRAFL
CTD»
0.0
LOC118420781 Deoxynucleotidyltransferase terminal-interacting
protein 2-like		 Branchiostoma floridae
TI:7739 None
 
C5XZD1_SORBI
EnsemblPlants»
0.0
SORBI_3004G250500 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Sorghum bicolor
TI:4558 None
 
C8V0B4_EMENI
EnsemblFungi»
0.0
ANIA_06491 Nucleolus protein required for
cell viability, putative (AFU_orthologue AFUA_6G05310)		 Emericella nidulans
TI:162425 None
 
D6WD94_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_00065 Deoxynucleotidyltransferase terminal-interacting
protein 2-like Protein		 Tribolium castaneum
TI:7070 None
 
D8RWL1_SELML
EnsemblPlants»
0.0
SELMODRAFT_103537 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Selaginella moellendorffii
TI:88036 None
 
D8S634_SELML
EnsemblPlants»
0.0
SELMODRAFT_109347 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Selaginella moellendorffii
TI:88036 None
 
E3K7A4_PUCGT
EnsemblFungi»
0.0
PGTG_06209 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Puccinia graminis
TI:5297 None
 
E9HTR6_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_65840 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Daphnia pulex
TI:6669 None
 
F0ZEF8_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_149698 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Dictyostelium purpureum
TI:5786 None
 
F4PAY2_BATDJ
EnsemblBacteria»
0.0
BATDEDRAFT_13703 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Batrachochytrium dendrobatidis
TI:109871 None
 
F6HE40_VITVI
EnsemblPlants»
0.0
VIT_05s0020g00780 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Vitis vinifera
TI:29760 None
 
FCF2_SCHPO
PomBase»
1.0
fcf2 rRNA-processing protein fcf2 Schizosaccharomyces pombe
TI:4896 None
 
G3RRP0_GORGO
Ensembl»
0.0
Deoxynucleotidyltransferase terminal
interacting protein 2		 Gorilla gorilla
TI:9593 None
 
H2XUJ7_CIOIN
Ensembl»
0.0
Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Ciona intestinalis
TI:7719 None
 
I1IEJ6_BRADI
EnsemblPlants»
0.0
100840529 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Brachypodium distachyon
TI:15368 None
 
I1LGG7_SOYBN
EnsemblPlants»
0.0
100785966 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Glycine max
TI:3847 None
 
K7M6D3_SOYBN
EnsemblPlants»
0.0
100804228 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Glycine max
TI:3847 None
 
K7M6D6_SOYBN
EnsemblPlants»
0.0
GLYMA_14G125900 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Glycine max
TI:3847 None
 
M3X060_FELCA
Ensembl»
0.0
DNTTIP2 Deoxynucleotidyltransferase terminal
interacting protein 2		 Felis catus
TI:9685 None
 
Q4WDN0_ASPFU
EnsemblFungi»
0.0
AFUA_6G05310 Nucleolus protein required
for cell viability, putative		 Aspergillus fumigatus
TI:746128 None
 
Q5K768_CRYNJ
EnsemblFungi»
0.0
CNN00910 Nucleolar protein, putative Cryptococcus neoformans
TI:5207 None
 
Q6CFV8_YARLI
EnsemblFungi»
0.0
YALI0_B03278g YALI0B03278p Yarrowia lipolytica
TI:4952 None
 
Q752Q9_ASHGO
EnsemblFungi»
0.0
AGOS_AFR514C AFR514Cp Ashbya gossypii
TI:33169 None
 
Q7RYL3_NEUCR
EnsemblFungi»
0.0
NCU00115 rRNA-processing protein FCF2 Neurospora crassa
TI:5141 None
 
Q9N4U1_CAEEL
WormBase»
0.5
CELE_Y49F6B.2 Y49F6B.2 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Caenorhabditis elegans
TI:6239 None
 
TDIF2_BOVIN
Ensembl»
0.0
DNTTIP2 Deoxynucleotidyltransferase terminal-interacting
protein 2		 Bos taurus
TI:9913 None
 
W1P8H2_AMBTC
EnsemblPlants»
0.0
AMTR_s00077p00126790 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Amborella trichopoda
TI:13333 None
 
W5MTS6_LEPOC
Ensembl»
0.0
Deoxynucleotidyltransferase terminal
interacting protein 2		 Lepisosteus oculatus
TI:7918 None
 
A0A1D5Q3I4_MACMU
Ensembl»
0.0
DNTTIP2 Deoxynucleotidyltransferase terminal
interacting protein 2		 Macaca mulatta
TI:9544 None
   
A0A1L8FIS5_XENLA
Xenbase»
0.0
dnttip2.L Deoxynucleotidyltransferase terminal-interacting
protein 2		 Xenopus laevis
TI:8355 None
   
A0A1S3X7Q9_TOBAC
EnsemblFungi»
0.0
LOC107762036 rRNA-processing protein fcf2-like Nicotiana tabacum
TI:4097 None
   
A0A1S3Z8X5_TOBAC
EnsemblFungi»
0.0
LOC107784260 rRNA-processing protein fcf2-like Nicotiana tabacum
TI:4097 None
   
A0A1S3ZEX1_TOBAC
EnsemblFungi»
0.0
LOC107785976 rRNA-processing protein fcf2-like Nicotiana tabacum
TI:4097 None
   
A0A1U7ZCI8_NELNU
EnsemblBacteria»
0.0
LOC104593218 rRNA-processing protein fcf2-like Nelumbo nucifera
TI:4432 None
   
A0A1U8JUB3_GOSHI
Ensembl»
0.0
LOC107910525 rRNA-processing protein fcf2-like Gossypium hirsutum
TI:3635 None
   
A0A1U8NT07_GOSHI
Ensembl»
0.0
LOC107951542 rRNA-processing protein fcf2-like Gossypium hirsutum
TI:3635 None
   
A0A2I4DGC9_JUGRE
EnsemblPlants»
0.0
LOC108979893 rRNA-processing protein fcf2-like Juglans regia
TI:51240 None
   
A0A3Q7HG86_SOLLC
EnsemblPlants»
0.0
101268685 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Solanum lycopersicum
TI:4081 None
   
A0A6I8P5E8_ORNAN
Ensembl»
0.0
DNTTIP2 Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Ornithorhynchus anatinus
TI:9258 None
   
A0A7M7TGV0_STRPU
EnsemblMetazoa»
0.0
Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Strongylocentrotus purpuratus
TI:7668 None
   
A0A804LPL8_MAIZE
EnsemblPlants»
0.0
Uncharacterized protein Zea mays
TI:4577 None
   
A0A804U6H9_MAIZE
EnsemblPlants»
0.0
Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Zea mays
TI:4577 None
   
A0A8I3NV63_CANLF
Ensembl»
0.0
DNTTIP2 Deoxynucleotidyltransferase terminal
interacting protein 2		 Canis lupus
TI:9612 None
   
A0A8I6YF22_HORVV
EnsemblPlants»
0.0
Fcf2 pre-rRNA processing
C-terminal domain-containing protein		 Hordeum vulgare
TI:4513 None
   
A0A8N7UZA2_DANRE
CTD»
0.5
dnttip2 Deoxynucleotidyltransferase terminal-interacting
protein 2		 Danio rerio
TI:7955 None
   
A0A8V0ZY18_CHICK
Ensembl»
0.0
DNTTIP2 Deoxynucleotidyltransferase terminal
interacting protein 2		 Gallus gallus
TI:9031 None
   
D3ZHM7_RAT
RGD»
1.0
Dnttip2 Deoxynucleotidyltransferase, terminal,
interacting protein 2		 Rattus norvegicus
TI:10116 None
   
F1S537_PIG
Ensembl»
0.0
DNTTIP2 Deoxynucleotidyltransferase terminal
interacting protein 2		 Sus scrofa
TI:9823 None
   
F6X146_MONDO
Ensembl»
0.0
DNTTIP2 Deoxynucleotidyltransferase terminal
interacting protein 2		 Monodelphis domestica
TI:13616 None
   
F6XKI9_HORSE
Ensembl»
0.0
DNTTIP2 Deoxynucleotidyltransferase terminal
interacting protein 2		 Equus caballus
TI:9796 None
   
G1KYM4_ANOCA
Ensembl»
0.0
DNTTIP2 Deoxynucleotidyltransferase terminal
interacting protein 2		 Anolis carolinensis
TI:28377 None
   
H2MRM3_ORYLA
Ensembl»
0.0
dnttip2 Deoxynucleotidyltransferase terminal
interacting protein 2		 Oryzias latipes
TI:8090 None
   
M1CL78_SOLTU
EnsemblPlants»
0.0
102602630 Acidic 82 kDa protein Solanum tuberosum
TI:4113 None