Standard knownness: 5.0; Custom knownness: None; Num. species: 94; Orthology database: Panther19.0; Protein members: 120
Molecular function:
mRNA splicing, via spliceosome2006, 2010, 2011, 2016, 2019, 2021, 2023, 2024
embryonic brain development2021, 2024
mRNA cis splicing, via spliceosome2023, 2024
generation of catalytic spliceosome for second transesterification step2013, 2016, 2024
mRNA branch site recognition2013, 2024
mRNA 3'-splice site recognition2013, 2024
mRNA processing2024
cell division2024
RNA splicing2024
RNA splicing, via transesterification reactions2007, 2009
ribosomal large subunit biogenesis2021
mitochondrial translation2024
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
intraciliary transport involved in cilium assembly2024
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
chromatin remodeling2024
Cellular component:
catalytic step 2 spliceosome2010, 2011, 2021, 2024
spliceosomal complex2006, 2007, 2013, 2023, 2024
nuclear speck2019, 2024
nucleoplasm2013, 2018, 2023, 2024
U2-type catalytic step 2 spliceosome2018, 2019, 2024
Prp19 complex2013, 2016, 2024
post-mRNA release spliceosomal complex2016, 2024
nucleus2009, 2017, 2024
nuclear periphery2016, 2024
ribosome2024
precatalytic spliceosome2010
organelle2024
nucleolus2018
mitochondrial large ribosomal subunit2024
membrane2024
extracellular region2019
ciliary tip2024
ciliary pocket collar2024
ciliary basal body2024
9+2 motile cilium2024
Chordates: | 22/21 | |
Echinoderms: | 0/0 | |
Hemichordates: | 1/1 | |
Annelids: | 1/1 | |
Molluscs: | 0/0 | |
Bryozoans: | 0/0 | |
Platyhelminthes: | 0/0 | |
Rotifers: | 0/0 | |
Nematodes: | 3/3 | |
Arthropods: | 5/5 | |
Tardigrades: | 0/0 | |
Placozoa: | 1/1 | |
Cnidaria: | 1/1 | |
Porifera: | 0/0 | |
Choanoflagellates+: | 14/1 | |
Dikarya: | 0/14 | |
Fungi (other): | 0/1 | |
Protozoa: | 3/3 | |
Excavates: | 3/4 | |
Harosa: | 4/4 | |
Hacrobia: | 0/0 | |
Plants: | 36/39 | |
Archea: | 0/8 | |
Bacteria: | 0/35 |
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UniProt ID Organism DB» |
Standard knownness | clustom knownness | Gene name | Description | Species [Show all] | GO terms | Seq. links | Protein domain links | |||||
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A4FVN8_ARATH TAIR» |
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At1g10580 | At1g10580 (Transducin/WD40 repeat-like superfamily protein) |
Arabidopsis thaliana TI:3702 None |
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A5A8P6_CAEEL WormBase» |
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CELE_Y54G2A.12 Y54G2A.12 | WD_REPEATS_REGION domain-containing protein |
Caenorhabditis elegans TI:6239 None |
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B2RYC1_RAT RGD» |
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Cdc40 | Cdc40 protein (Cell division cycle 40) |
Rattus norvegicus TI:10116 None |
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F1NQ45_CHICK Ensembl» |
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CDC40 | Cell division cycle 40 |
Gallus gallus TI:9031 None |
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O44729_CAEEL WormBase» |
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prp-17 | WD_REPEATS_REGION domain-containing protein |
Caenorhabditis elegans TI:6239 None |
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PRP17_HUMAN Ensembl» |
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CDC40 | Pre-mRNA-processing factor 17 (Cell division cycle 40 homolog) (EH-binding protein 3) (Ehb3) (PRP17 homolog) (hPRP17) |
Homo sapiens TI:9606 None |
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PRP17_MOUSE Ensembl» |
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Cdc40 | Pre-mRNA-processing factor 17 (Cell division cycle 40 homolog) (PRP17 homolog) |
Mus musculus TI:10090 None |
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PRP17_SCHPO PomBase» |
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prp17 | Pre-mRNA-processing factor 17 |
Schizosaccharomyces pombe TI:4896 None |
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PRP17_YEAST SGD» |
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CDC40 | Pre-mRNA-processing factor 17 (Cell division control protein 40) |
Saccharomyces cerevisiae TI:4932 None |
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Q54HF5_DICDI dictyBase» |
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cdc40 | WD40 repeat-containing protein |
Dictyostelium discoideum TI:44689 None |
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Q5I0F8_DANRE ZFIN» |
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zgc:86860 | Cell division cycle 40 homolog (S. cerevisiae) (Pre-mRNA-processing factor 17) |
Danio rerio TI:7955 None |
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Q9VD52_DROME FlyBase» |
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CDC40 | LD21931p |
Drosophila melanogaster TI:7227 None |
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