Collated Gene Ontology terms

Biological process: nucleic acid binding(2024) mRNA binding(2024) RNA 7-methylguanosine cap binding(2024)

Molecular function:

Cellular component: exon-exon junction complex2013 membrane2024

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 2/3 
Arthropods: 4/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 0/1 
Porifera: 0/0 
Choanoflagellates+: 3/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 0/3 
Excavates: 0/4 
Harosa: 0/4 
Hacrobia: 0/0 
Plants: 36/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
U5CS93_AMBTC
EnsemblPlants»
0.0
AMTR_s00030p00171760 Uncharacterized protein Amborella trichopoda
TI:13333 None 		 
 
U5D3V9_AMBTC
EnsemblPlants»
0.0
AMTR_s00030p00172420 RRM domain-containing protein Amborella trichopoda
TI:13333 None
 
G1KBP1_ANOCA
Ensembl»
0.0
R3HCC1L R3H domain and coiled-coil containing 1 like Anolis carolinensis
TI:28377 None 		     
H9GNE8_ANOCA
Ensembl»
0.0
R3HCC1 R3H domain and coiled-coil containing 1 Anolis carolinensis
TI:28377 None
   
A0A1S4GJW1_ANOGA
EnsemblMetazoa»
0.0
Growth inhibition and
differentiation-related protein 88		 Anopheles gambiae
TI:7165 None 		 
 
Q9C576_ARATH
TAIR»
0.0
At5g22120 At5g22100 (At5g22100/At5g22100) (Coiled-coil
protein) (Uncharacterized protein At5g22120)		 Arabidopsis thaliana
TI:3702 None
 
F4P6W3_BATDJ
EnsemblBacteria»
0.0
BATDEDRAFT_26327 RRM domain-containing protein Batrachochytrium dendrobatidis
TI:109871 None 		 
 
F1MFT2_BOVIN
Ensembl»
0.0
R3HCC1 R3H domain and coiled-coil containing 1 Bos taurus
TI:9913 None
   
A0A0Q3RER3_BRADI
EnsemblPlants»
0.0
100828372 RRM domain-containing protein Brachypodium distachyon
TI:15368 None
 
A0A9J7MMS2_BRAFL
CTD»
0.0
LOC118413289 Coiled-coil domain-containing protein
R3HCC1L-like isoform X1		 Branchiostoma floridae
TI:7739 None
   
M4CDV9_BRACM
EnsemblPlants»
0.0
R3H domain-containing protein Brassica campestris
TI:3711 None 		     
M4CDW0_BRACM
EnsemblPlants»
0.0
R3H-associated N-terminal
domain-containing protein		 Brassica campestris
TI:3711 None 		     
M4CQX1_BRACM
EnsemblPlants»
0.0
RRM domain-containing protein Brassica campestris
TI:3711 None 		     
A8XNJ1_CAEBR
WormBase»
0.0
CBG16396 CBG_16396 Protein CBG16396 Caenorhabditis briggsae
TI:6238 None 		 
 
O01299_CAEEL
WormBase»
0.0
CELE_F09C8.2 F09C8.2 C3H1-type domain-containing protein Caenorhabditis elegans
TI:6239 None 		 
 
A0A8I3NTV8_CANLF
Ensembl»
0.0
R3HCC1 R3H domain and coiled-coil containing 1 Canis lupus
TI:9612 None
   
A0A8I3Q3J7_CANLF
Ensembl»
0.0
R3HCC1L R3H domain and coiled-coil containing 1 like Canis lupus
TI:9612 None 		     
A0A2G2ZDL3_CAPAN
EnsemblPlants»
0.0
T459_18043 Coiled-coil domain-containing protein R3HCC1L Capsicum annuum
TI:4072 None
 
A0A2K3DGL7_CHLRE
EnsemblPlants»
0.0
CHLRE_08g362850v5 Uncharacterized protein Chlamydomonas reinhardtii
TI:3055 None 		 
 
F6QM26_CIOIN
Ensembl»
0.0
R3H domain-containing protein Ciona intestinalis
TI:7719 None
 
F6ZFQ4_CIOIN
Ensembl»
0.0
ELM2 domain-containing protein Ciona intestinalis
TI:7719 None 		 
 
A0A067DUS0_CITSI
Ensembl»
0.0
CISIN_1g017900mg Coiled-coil domain-containing protein R3HCC1L Citrus sinensis
TI:2711 None
 
Q5K9A6_CRYNJ
EnsemblFungi»
0.0
CNK02610 Uncharacterized protein Cryptococcus neoformans
TI:5207 None 		 
 
A0A0A0LXV6_CUCSA
EnsemblPlants»
0.0
Csa_1G633390 Uncharacterized protein Cucumis sativus
TI:3659 None 		 
 
A0A0A0LZY5_CUCSA
EnsemblPlants»
0.0
Csa_1G633400 Coiled-coil domain-containing protein R3HCC1L Cucumis sativus
TI:3659 None 		 
 
A0A8M1PUQ9_DANRE
CTD»
0.0
r3hcc1 R3H and coiled-coil domain-containing protein 1 Danio rerio
TI:7955 None
   
E7F1G4_DANRE
ZFIN»
0.0
r3hcc1l Coiled-coil domain-containing protein R3HCC1L
(R3H domain and coiled-coil-containing 1-like)		 Danio rerio
TI:7955 None
 
E9G3C8_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_98337 R3H domain-containing protein Daphnia pulex
TI:6669 None
 
E1JIB4_DROME
FlyBase»
0.0
anon-EST:Posey170 Uncharacterized protein, isoform E Drosophila melanogaster
TI:7227 None
 
A0A3Q2GZY0_HORSE
Ensembl»
0.0
R3HCC1 R3H domain and coiled-coil containing 1 Equus caballus
TI:9796 None
   
A0A3Q2H3L5_HORSE
Ensembl»
0.0
R3HCC1L R3H domain and coiled-coil containing 1 like Equus caballus
TI:9796 None 		     
A0A022R8H1_ERYGU
EnsemblFungi»
0.0
MIMGU_mgv1a010953mg Uncharacterized protein Erythranthe guttata
TI:4155 None 		 
 
A0A2I2UPP4_FELCA
Ensembl»
0.0
R3HCC1 R3H domain and coiled-coil containing 1 Felis catus
TI:9685 None
 
M3X392_FELCA
Ensembl»
0.0
R3HCC1L R3H domain and coiled-coil containing 1 like Felis catus
TI:9685 None 		 
 
A0A8V0Z314_CHICK
Ensembl»
0.0
R3HCC1L R3H domain and coiled-coil containing 1 like Gallus gallus
TI:9031 None
   
A0A8V0ZIZ7_CHICK
Ensembl»
0.0
R3HCC1 R3H domain and coiled-coil containing 1 Gallus gallus
TI:9031 None
   
K7LTX3_SOYBN
EnsemblPlants»
0.0
100815577 Coiled-coil domain-containing protein R3HCC1L Glycine max
TI:3847 None 		 
 
K7N1E4_SOYBN
EnsemblPlants»
0.0
GLYMA_20G039700 RRM domain-containing protein Glycine max
TI:3847 None 		 
 
G3QQ38_GORGO
Ensembl»
0.0
R3HCC1L R3H domain and coiled-coil containing 1 like Gorilla gorilla
TI:9593 None 		 
 
G3RD81_GORGO
Ensembl»
0.0
R3HCC1 R3H domain and coiled-coil containing 1 Gorilla gorilla
TI:9593 None
 
A0A1U8HSV1_GOSHI
Ensembl»
0.0
LOC107889218 Coiled-coil domain-containing protein
R3HCC1L-like isoform X1		 Gossypium hirsutum
TI:3635 None 		     
A0A1U8IYH4_GOSHI
Ensembl»
0.0
LOC107899692 Coiled-coil domain-containing
protein R3HCC1L-like		 Gossypium hirsutum
TI:3635 None 		     
A0A251UWC1_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr04g0096771 Putative nucleotide-binding alpha-beta
plait domain-containing protein		 Helianthus annuus
TI:4232 None 		 
 
T1G4X3_HELRO
EnsemblMetazoa»
0.0
20216121 Coiled-coil domain-containing protein R3HCC1L Helobdella robusta
TI:6412 None
 
R3HC1_HUMAN
Ensembl»
0.0
R3HCC1 R3H and coiled-coil domain-containing protein 1 Homo sapiens
TI:9606 None
 
R3HCL_HUMAN
Ensembl»
0.0
R3HCC1L Coiled-coil domain-containing protein R3HCC1L (Growth inhibition and differentiation-related protein 88)
(Putative mitochondrial space protein 32.1) (R3H and coiled-coil domain-containing protein 1-like)		 Homo sapiens
TI:9606 None
 
F2E7F6_HORVV
EnsemblPlants»
0.0
Predicted protein Hordeum vulgare
TI:4513 None
 
A0A2I4ECB6_JUGRE
EnsemblPlants»
0.0
LOC108988274 Coiled-coil domain-containing protein R3HCC1L Juglans regia
TI:51240 None 		     
A0A1Y1IB86_KLENI
EnsemblPlants»
0.0
KFL_004110040 RRM domain-containing protein Klebsormidium nitens
TI:105231 None
 
W5MR84_LEPOC
Ensembl»
0.0
R3H domain and coiled-coil containing 1 like Lepisosteus oculatus
TI:7918 None 		 
 
W5NEE8_LEPOC
Ensembl»
0.0
R3H domain and coiled-coil containing 1 Lepisosteus oculatus
TI:7918 None
 
F6W195_MACMU
Ensembl»
0.0
R3HCC1 R3H domain and coiled-coil containing 1 Macaca mulatta
TI:9544 None
   
F7EGC1_MACMU
Ensembl»
0.0
R3HCC1L R3H domain and coiled-coil containing 1 like Macaca mulatta
TI:9544 None 		     
A0A2C9V1L3_MANES
EnsemblPlants»
0.0
MANES_11G101400 Uncharacterized protein Manihot esculenta
TI:3983 None 		 
 
A0A2R6XA54_MARPO
EnsemblPlants»
0.0
MARPO_0027s0100 RRM domain-containing protein Marchantia polymorpha
TI:3197 None 		 
 
A0A072UJ96_MEDTR
EnsemblPlants»
0.0
25492198 Growth inhibition and differentiation-like protein, putative
(Putative nucleotide-binding alpha-beta plait domain-containing protein)		 Medicago truncatula
TI:3880 None
 
A0A5F8G478_MONDO
Ensembl»
0.0
R3H domain and coiled-coil containing 1 Monodelphis domestica
TI:13616 None
   
A0A5F8HJT2_MONDO
Ensembl»
0.0
R3H domain and coiled-coil containing 1 like Monodelphis domestica
TI:13616 None
   
R3HC1_MOUSE
Ensembl»
0.0
R3hcc1 R3H and coiled-coil domain-containing protein 1 Mus musculus
TI:10090 None
 
R3HCL_MOUSE
Ensembl»
0.0
R3hcc1l Coiled-coil domain-containing protein R3HCC1L (Growth inhibition and differentiation-related
protein 88 homolog) (R3H and coiled-coil domain-containing protein 1-like)		 Mus musculus
TI:10090 None
 
A0A804KWP2_MUSAM
EnsemblPlants»
0.0
GSMUA_318780.1 (wild Malaysian banana) hypothetical protein Musa acuminata
TI:4641 None
 
A0A1U7Z2A3_NELNU
EnsemblBacteria»
0.0
LOC104590320 Uncharacterized protein LOC104590320 isoform X1 Nelumbo nucifera
TI:4432 None 		     
A0A1S4CM84_TOBAC
EnsemblFungi»
0.0
LOC107820390 Uncharacterized protein LOC107820390 Nicotiana tabacum
TI:4097 None 		     
A0A1S4CTM3_TOBAC
EnsemblFungi»
0.0
LOC107822548 Uncharacterized protein LOC107822548 isoform X1 Nicotiana tabacum
TI:4097 None 		     
A0A1S4DD28_TOBAC
EnsemblFungi»
0.0
LOC107828536 Uncharacterized protein LOC107828536 isoform X1 Nicotiana tabacum
TI:4097 None 		     
A0A6I8N2M7_ORNAN
Ensembl»
0.0
R3H domain and coiled-coil containing 1 like Ornithorhynchus anatinus
TI:9258 None 		     
A0A6I8P7C7_ORNAN
Ensembl»
0.0
R3H domain-containing protein Ornithorhynchus anatinus
TI:9258 None
   
A0A6I8PG95_ORNAN
Ensembl»
0.0
Uncharacterized protein Ornithorhynchus anatinus
TI:9258 None 		     
Q5JJV8_ORYSJ
EnsemblPlants»
0.0
Os01g0965600 Os01g0965600 protein (cDNA
clone:J033042I24, full insert sequence)		 Oryza sativa
TI:4530 None
 
H2M786_ORYLA
Ensembl»
0.0
r3hcc1l R3H domain and coiled-coil containing 1 like Oryzias latipes
TI:8090 None
   
H2MQL8_ORYLA
Ensembl»
0.0
r3hcc1 R3H domain and coiled-coil containing 1 Oryzias latipes
TI:8090 None
   
A0A2I3S070_PANTR
Ensembl»
0.0
R3HCC1L R3H domain and coiled-coil containing 1 like Pan troglodytes
TI:9598 None 		 
 
H2QVW3_PANTR
Ensembl»
0.0
R3HCC1 R3H domain and coiled-coil containing 1 Pan troglodytes
TI:9598 None
 
A9SWZ0_PHYPA
EnsemblPlants»
0.0
PHYPA_009715 Coiled-coil domain-containing protein R3HCC1L Physcomitrium patens
TI:3218 None 		 
 
B9PB74_POPTR
EnsemblPlants»
0.0
POPTR_009G015900 Uncharacterized protein Populus trichocarpa
TI:3694 None 		 
 
U5GUY0_POPTR
EnsemblPlants»
0.0
POPTR_001G216500 RRM domain-containing protein Populus trichocarpa
TI:3694 None
 
M5W335_PRUPE
EnsemblPlants»
0.0
PRUPE_7G038700 RRM domain-containing protein Prunus persica
TI:3760 None
 
E3KB27_PUCGT
EnsemblFungi»
0.0
PGTG_07808 Uncharacterized protein Puccinia graminis
TI:5297 None
 
A0A0G2JZM0_RAT
RGD»
0.0
R3hcc1l R3H domain and coiled-coil containing 1-like Rattus norvegicus
TI:10116 None
   
F1LZB0_RAT
RGD»
0.0
R3hcc1 R3H domain and coiled-coil containing 1 Rattus norvegicus
TI:10116 None
   
B9RJ01_RICCO
EnsemblBacteria»
0.0
RCOM_1753570 Coiled-coil domain-containing protein R3HCC1L Ricinus communis
TI:3988 None 		 
 
D8RB52_SELML
EnsemblPlants»
0.0
SELMODRAFT_440346 RRM domain-containing protein Selaginella moellendorffii
TI:88036 None
 
D8RYI2_SELML
EnsemblPlants»
0.0
SELMODRAFT_443110 RRM domain-containing protein Selaginella moellendorffii
TI:88036 None
 
K3XJ90_SETIT
EnsemblPlants»
0.0
101783802 RRM domain-containing protein Setaria italica
TI:4555 None
 
A0A3Q7H334_SOLLC
EnsemblPlants»
0.0
101256295 Coiled-coil domain-containing protein R3HCC1L Solanum lycopersicum
TI:4081 None
   
M1A5L1_SOLTU
EnsemblPlants»
0.0
102595388 Coiled-coil domain-containing protein R3HCC1L Solanum tuberosum
TI:4113 None
   
A0A1B6Q8E7_SORBI
EnsemblPlants»
0.0
SORBI_3003G439800 RRM domain-containing protein Sorghum bicolor
TI:4558 None
 
C5Z0Q6_SORBI
EnsemblPlants»
0.0
SORBI_3009G056800 RRM domain-containing protein Sorghum bicolor
TI:4558 None
 
A0A7M7NVM9_STRPU
EnsemblMetazoa»
0.0
R3H domain-containing protein Strongylocentrotus purpuratus
TI:7668 None
   
A0A287AI78_PIG
Ensembl»
0.0
LOC110258721 R3H domain-containing protein Sus scrofa
TI:9823 None
   
A0A287BM77_PIG
Ensembl»
0.0
R3HCC1 R3H domain-containing protein Sus scrofa
TI:9823 None
   
A0A4X1U9G2_PIG
Ensembl»
0.0
R3HCC1L R3H domain and coiled-coil containing 1 like Sus scrofa
TI:9823 None 		     
A0A061GUX5_THECC
EnsemblPlants»
0.0
TCM_041229 Uncharacterized protein isoform 1 Theobroma cacao
TI:3641 None 		 
 
A0A061GV57_THECC
EnsemblPlants»
0.0
TCM_041231 Coiled-coil domain-containing protein R3HCC1L Theobroma cacao
TI:3641 None 		 
 
D6W811_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_04772 Uncharacterized protein Tribolium castaneum
TI:7070 None
 
B3S396_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_58641 R3H domain-containing protein Trichoplax adhaerens
TI:10228 None 		 
 
A0A080YU72_WHEAT
EnsemblPlants»
0.0
TRAES_3BF279600020CFD_c1 RRM domain-containing protein Triticum aestivum
TI:4565 None
 
A0A3B6EUZ4_WHEAT
EnsemblPlants»
0.0
CFC21_038451 RRM domain-containing protein Triticum aestivum
TI:4565 None
 
A0A3B6H2Q7_WHEAT
EnsemblPlants»
0.0
CFC21_050528 RRM domain-containing protein Triticum aestivum
TI:4565 None
 
D7T1Q0_VITVI
EnsemblPlants»
0.0
VIT_06s0009g00340 Coiled-coil domain-containing protein R3HCC1L Vitis vinifera
TI:29760 None
 
F6GUK9_VITVI
EnsemblPlants»
0.0
VIT_06s0004g07340 Coiled-coil domain-containing protein R3HCC1L Vitis vinifera
TI:29760 None 		 
 
A0A1L8FJV8_XENLA
Xenbase»
0.0
LOC108696228 Coiled-coil domain-containing protein R3HCC1L Xenopus laevis
TI:8355 None 		     
A0A6I8T0A1_XENTR
Ensembl»
0.0
r3hcc1l Coiled-coil domain-containing protein R3HCC1L (R3H
domain and coiled-coil containing 1 like)		 Xenopus tropicalis
TI:8364 None 		     
A0A8J0SHW7_XENTR
Xenbase»
0.0
r3hcc1 R3H and coiled-coil domain-containing protein 1 Xenopus tropicalis
TI:8364 None 		     
A0A8J0URW4_XENLA
Xenbase»
0.0
LOC108711590 R3H and coiled-coil domain-containing protein 1 Xenopus laevis
TI:8355 None
   
A0A8J1JXM6_XENTR
Xenbase»
0.0
LOC101733434 Coiled-coil domain-containing
protein R3HCC1L-like		 Xenopus tropicalis
TI:8364 None 		     
A0A8J1L555_XENLA
Xenbase»
0.0
r3hcc1l.L Coiled-coil domain-containing protein
R3HCC1L isoform X1		 Xenopus laevis
TI:8355 None 		     
B6TKU0_MAIZE
EnsemblPlants»
0.0
100283709 Growth inhibition and differentiation-related protein 88
(Growth inhibition and differentiation-related protein 88-like protein)		 Zea mays
TI:4577 None
 
A0A0K9PB44_ZOSMR
EnsemblPlants»
0.0
ZOSMA_2G03290 Uncharacterized protein Zostera marina
TI:29655 None