Collated Gene Ontology terms

Biological process: isopentenyl-diphosphate delta-isomerase activity(2005, 2007, 2008, 2011, 2013, 2017, 2024) isomerase activity(2024) metal ion binding(2024) hydrolase activity(2007, 2022, 2024) hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides(2019, 2023) hydrolase activity, acting on acid anhydrides(2024) catalytic activity(2024) magnesium ion binding(2011, 2019, 2022) zinc ion binding(2019) nucleotide binding(2024)
nucleoside diphosphate phosphatase activity2024 manganese ion binding2011 helicase activity2024

Molecular function: isoprenoid biosynthetic process2011, 2013, 2024 dimethylallyl diphosphate biosynthetic process2024 isopentenyl diphosphate biosynthetic process2008, 2017, 2024 photosynthesis2024 chlorophyll biosynthetic process2024 cholesterol biosynthetic process2005, 2024 sterol biosynthetic process2024 isopentenyl diphosphate metabolic process2013, 2024 farnesyl diphosphate biosynthetic process2013, 2018, 2024 negative regulation of cholesterol biosynthetic process2011, 2013
ergosterol biosynthetic process2022, 2024 response to stilbenoid2011 steroid biosynthetic process2024 nucleotide metabolic process2022 nucleobase-containing compound metabolic process2007 flower development2008 DNA damage response2010

Cellular component: cytoplasm2018, 2020, 2023, 2024 peroxisome2005, 2011, 2012, 2013, 2024 cytosol2008, 2009, 2013, 2014, 2018 chloroplast2021, 2024 nucleus2009, 2018, 2024 mitochondrion2008, 2009, 2021 plastid2008, 2019 intracellular membrane-bounded organelle2023, 2024 vacuole2022 membrane2024

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 2/3 
Arthropods: 4/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 13/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 2/4 
Harosa: 4/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 2/8 
Bacteria: 11/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
Q55D56_DICDI
dictyBase»
1.0
DDB_G0269784 Nudix hydrolase domain-containing protein Dictyostelium discoideum
TI:44689 None
 
A0A8V0XM86_CHICK
Ensembl»
0.0
IDI2 isopentenyl-diphosphate Delta-isomerase
(EC 5.3.3.2)		 Gallus gallus
TI:9031 None
   
A0A8I6A8A3_RAT
RGD»
0.0
ENSRNOG00000062441 isopentenyl-diphosphate Delta-isomerase
(EC 5.3.3.2)		 Rattus norvegicus
TI:10116 None
   
A0A8I6AD97_RAT
RGD»
0.0
LOC120097764 isopentenyl-diphosphate Delta-isomerase
(EC 5.3.3.2)		 Rattus norvegicus
TI:10116 None
   
G5EFQ1_CAEEL
WormBase»
1.0
idi-1 isopentenyl-diphosphate Delta-isomerase
(EC 5.3.3.2)		 Caenorhabditis elegans
TI:6239 None
 
F1QVG2_DANRE
ZFIN»
1.0
zgc:114138 isopentenyl-diphosphate Delta-isomerase
(EC 5.3.3.2)		 Danio rerio
TI:7955 None
 
YFCD_ECOLI
EnsemblBacteria»
1.3
yfcD Uncharacterized Nudix hydrolase
YfcD (EC 3.6.-.-)		 Escherichia coli
TI:562 None
 
A0A0G2JYZ4_RAT
RGD»
1.0
LOC102551575 isopentenyl-diphosphate Delta-isomerase
(EC 5.3.3.2)		 Rattus norvegicus
TI:10116 None
   
D3ZVY0_RAT
RGD»
1.0
RGD1564999 isopentenyl-diphosphate Delta-isomerase
(EC 5.3.3.2)		 Rattus norvegicus
TI:10116 None
   
IDI_DICDI
dictyBase»
1.0
ipi Isopentenyl-diphosphate Delta-isomerase (EC 5.3.3.2) (Isopentenyl
pyrophosphate isomerase) (IPP isomerase) (IPPI)		 Dictyostelium discoideum
TI:44689 None
 
M0RBU2_RAT
RGD»
1.0
RGD1564347 isopentenyl-diphosphate Delta-isomerase
(EC 5.3.3.2)		 Rattus norvegicus
TI:10116 None
   
IDI1_MOUSE
Ensembl»
0.8
Idi1 Isopentenyl-diphosphate Delta-isomerase 1 (EC 5.3.3.2) (Isopentenyl
pyrophosphate isomerase 1) (IPP isomerase 1) (IPPI1)		 Mus musculus
TI:10090 None
 
A0A8I6G2W8_RAT
RGD»
2.0
Idi2 isopentenyl-diphosphate Delta-isomerase
(EC 5.3.3.2)		 Rattus norvegicus
TI:10116 None
   
Q9VDC2_DROME
FlyBase»
2.0
Idi isopentenyl-diphosphate Delta-isomerase
(EC 5.3.3.2)		 Drosophila melanogaster
TI:7227 None
 
IDI2_MOUSE
Ensembl»
2.6
Idi2 Isopentenyl-diphosphate delta-isomerase 2 (EC 5.3.3.2) (Isopentenyl
pyrophosphate isomerase 2) (IPP isomerase 2) (IPPI2)		 Mus musculus
TI:10090 None
 
IDI_ECOLI
EnsemblBacteria»
4.0
idi Isopentenyl-diphosphate Delta-isomerase (IPP isomerase) (EC
5.3.3.2) (IPP:DMAPP isomerase) (Isopentenyl pyrophosphate isomerase)		 Escherichia coli
TI:562 None
 
IDI2_ARATH
TAIR»
0.8
IPP2 Isopentenyl-diphosphate Delta-isomerase II, chloroplastic (EC 5.3.3.2)
(Isopentenyl pyrophosphate isomerase II) (IPP isomerase II)		 Arabidopsis thaliana
TI:3702 None
 
IDI1_ARATH
TAIR»
1.6
IPP1 Isopentenyl-diphosphate Delta-isomerase I, chloroplastic (EC 5.3.3.2)
(Isopentenyl pyrophosphate isomerase I) (IPP isomerase I)		 Arabidopsis thaliana
TI:3702 None
 
IDI1_RAT
RGD»
3.3
Idi1 Isopentenyl-diphosphate Delta-isomerase 1 (EC 5.3.3.2) (Isopentenyl
pyrophosphate isomerase 1) (IPP isomerase 1) (IPPI1)		 Rattus norvegicus
TI:10116 None
 
IDI1_SCHPO
PomBase»
2.3
idi1 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)
(Isopentenyl pyrophosphate isomerasee) (IPP isomerase)		 Schizosaccharomyces pombe
TI:4896 None
 
IDI1_HUMAN
Ensembl»
4.2
IDI1 Isopentenyl-diphosphate Delta-isomerase 1 (EC 5.3.3.2) (Isopentenyl
pyrophosphate isomerase 1) (IPP isomerase 1) (IPPI1)		 Homo sapiens
TI:9606 None
 
IDI2_HUMAN
Ensembl»
3.4
IDI2 Isopentenyl-diphosphate delta-isomerase 2 (EC 5.3.3.2) (Isopentenyl
pyrophosphate isomerase 2) (IPP isomerase 2) (IPPI2)		 Homo sapiens
TI:9606 None
 
IDI1_YEAST
SGD»
3.4
IDI1 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)
(Isopentenyl pyrophosphate isomerase) (IPP isomerase)		 Saccharomyces cerevisiae
TI:4932 None