Standard knownness: 10.4; Custom knownness: None; Num. species: 106; Orthology database: Panther19.0; Protein members: 352
Molecular function:
mRNA processing2016, 2024
RNA catabolic process2023
spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)2013, 2022, 2023, 2024
DNA duplex unwinding2012, 2022, 2024
rescue of stalled ribosome2021, 2023, 2024
ribosome-associated ubiquitin-dependent protein catabolic process2021, 2022, 2024
ribosome disassembly2021, 2022, 2023, 2024
mRNA splicing, via spliceosome2006, 2010, 2011, 2013, 2016, 2019, 2020, 2022, 2024
DNA repair2024
DNA dealkylation involved in DNA repair2012, 2022, 2024
double-strand break repair via synthesis-dependent strand annealing2022, 2024
double-strand break repair via alternative nonhomologous end joining2022, 2024
DNA double-strand break processing involved in repair via single-strand annealing2022, 2024
double-strand break repair via homologous recombination2013, 2024
positive regulation of double-strand break repair via homologous recombination2022, 2024
RNA splicing2006, 2024
DNA biosynthetic process2024
DNA-templated DNA replication2024
nervous system development2024
DNA conformation change2024
regulation of translation2006, 2013, 2024
cytoplasmic translation2013, 2017, 2024
resolution of meiotic recombination intermediates2012, 2024
regulation of alternative mRNA splicing, via spliceosome2006, 2009, 2016
spliceosomal conformational changes to generate catalytic conformation2005, 2024
oogenesis2006
intron homing2024
intracellular mRNA localization2006
intein-mediated protein splicing2024
germarium-derived oocyte fate determination2006, 2007
ventral cord development2015
vegetative to reproductive phase transition of meristem2016
ubiquitin-dependent protein catabolic process2021
spermatogenesis2016
ribosomal large subunit export from nucleus2021
response to ionizing radiation2024
proteasome-mediated ubiquitin-dependent protein catabolic process2021
positive regulation of DNA repair2024
polarity specification of dorsal/ventral axis2006
polarity specification of anterior/posterior axis2006
osteoblast differentiation2017
oocyte karyosome formation2007
nucleobase-containing compound metabolic process2014
mitotic cell cycle2010
mitotic G2 DNA damage checkpoint signaling2024
meiotic cell cycle2024
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
maturation of 5.8S rRNA2020
female meiosis chromosome segregation2007
endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
double-strand break repair2024
defense response to virus2024
cis assembly of pre-catalytic spliceosome2006
chromatin organization2024
cell population proliferation2012
RNA splicing, via transesterification reactions2007
DNA metabolic process2002
Cellular component:
nucleus2006, 2009, 2012, 2014, 2016, 2017, 2018, 2019, 2020, 2021, 2022, 2023, 2024
spliceosomal complex2002, 2004, 2006, 2007, 2014, 2016, 2020, 2024
cytosol2009, 2019, 2021, 2023, 2024
U5 snRNP2006, 2013, 2016, 2021, 2024
ribonucleoprotein complex2024
cytosolic ribosome2023, 2024
U4/U6 x U5 tri-snRNP complex2005, 2013, 2016, 2017, 2022, 2024
site of DNA damage2022, 2024
nucleoplasm2013, 2014, 2017, 2023, 2024
activating signal cointegrator 1 complex2016, 2024
DNA repair complex2022, 2024
cytoplasm2018, 2023, 2024
U2-type precatalytic spliceosome2019, 2024
U2-type catalytic step 1 spliceosome2019, 2024
catalytic step 2 spliceosome2010, 2011, 2024
nuclear speck2024
membrane2014, 2017, 2024
chromosome2024
small nuclear ribonucleoprotein complex2006, 2014
post-mRNA release spliceosomal complex2016, 2024
single-stranded DNA-dependent ATP-dependent DNA helicase complex2002
precatalytic spliceosome2010
plasmodesma2021
nucleolus2021
nuclear body2024
cytoplasmic stress granule2020
RQC-trigger complex2023
BRCA1-A complex2024
Chordates: | 22/21 | ![]() |
Echinoderms: | 0/0 | |
Hemichordates: | 1/1 | |
Annelids: | 1/1 | |
Molluscs: | 0/0 | |
Bryozoans: | 0/0 | |
Platyhelminthes: | 0/0 | |
Rotifers: | 0/0 | |
Nematodes: | 3/3 | |
Arthropods: | 5/5 | |
Tardigrades: | 0/0 | |
Placozoa: | 1/1 | |
Cnidaria: | 1/1 | |
Porifera: | 0/0 | |
Choanoflagellates+: | 14/1 | |
Dikarya: | 0/14 | |
Fungi (other): | 0/1 | |
Protozoa: | 3/3 | |
Excavates: | 4/4 | |
Harosa: | 4/4 | |
Hacrobia: | 0/0 | |
Plants: | 37/39 | |
Archea: | 8/8 | |
Bacteria: | 2/35 |
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UniProt ID Organism DB» |
Standard knownness | clustom knownness | Gene name | Description | Species [Show all] | GO terms | Seq. links | Protein domain links | |||||
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DEXHC_ARATH TAIR» |
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BRR2A | DExH-box ATP-dependent RNA helicase DExH12 (EC 3.6.4.13) (BRR2 homolog A) (AtBRR2A) (Pre-mRNA-splicing helicase BRR2A) (Protein EMBRYO DEFECTIVE 1507) |
Arabidopsis thaliana TI:3702 None |
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DEXHD_ARATH TAIR» |
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BRR2B | DExH-box ATP-dependent RNA helicase DExH13 (EC 3.6.4.13) (BRR2 homolog B) (AtBRR2B) (Pre-mRNA-splicing helicase BRR2B) |
Arabidopsis thaliana TI:3702 None |
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DEXHE_ARATH TAIR» |
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BRR2C | DExH-box ATP-dependent RNA helicase DExH14 (EC 3.6.4.13) (BRR2 homolog C) (AtBRR2C) (Pre-mRNA-splicing helicase BRR2C) |
Arabidopsis thaliana TI:3702 None |
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HELQ_CAEEL WormBase» |
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helq-1 | Helicase POLQ-like (EC 3.6.4.12) |
Caenorhabditis elegans TI:6239 None |
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Q9XWI1_CAEEL WormBase» |
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CELE_Y54E2A.4 Y54E2A.4 | Activating signal cointegrator 1 complex subunit 3 |
Caenorhabditis elegans TI:6239 None |
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U520_CAEEL WormBase» |
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snrp-200 | U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13) (BRR2 homolog) |
Caenorhabditis elegans TI:6239 None |
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ASCC3_DANRE ZFIN» |
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ascc3 | Activating signal cointegrator 1 complex subunit 3 (EC 3.6.4.12) |
Danio rerio TI:7955 None |
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B0S754_DANRE ZFIN» |
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fb63a09 | Activating signal cointegrator 1 complex subunit 3 (U5 small nuclear ribonucleoprotein 200 kDa helicase) |
Danio rerio TI:7955 None |
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F1Q4P2_DANRE ZFIN» |
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hel308 | Helicase POLQ-like (EC 3.6.4.12) (Helicase, POLQ-like) |
Danio rerio TI:7955 None |
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ASCC3_DICDI dictyBase» |
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ascc3 | Activating signal cointegrator 1 complex subunit 3 (EC 3.6.4.12) |
Dictyostelium discoideum TI:44689 None |
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HELCL_DICDI dictyBase» |
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ascc3l | Activating signal cointegrator 1 complex subunit 3-like (EC 3.6.4.-) |
Dictyostelium discoideum TI:44689 None |
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Q54X98_DICDI dictyBase» |
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DDB_G0279107 | DNA-directed DNA polymerase |
Dictyostelium discoideum TI:44689 None |
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HELQ_DROME FlyBase» |
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mus301 | Helicase POLQ-like (EC 3.6.4.12) (Mutagen-sensitive protein 301) (Protein spindle-C) (Spindle-C) |
Drosophila melanogaster TI:7227 None |
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Q9VF56_DROME FlyBase» |
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obe | Obelus |
Drosophila melanogaster TI:7227 None |
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U520_DROME FlyBase» |
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Brr2 | U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13) (Protein lethal (3) 72Ab) |
Drosophila melanogaster TI:7227 None |
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A0A8V0XG98_CHICK Ensembl» |
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HELQ | Helicase, POLQ like |
Gallus gallus TI:9031 None |
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A0A8V0Z655_CHICK Ensembl» |
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SNRNP200 | Activating signal cointegrator 1 complex subunit 3 (U5 small nuclear ribonucleoprotein 200 kDa helicase) |
Gallus gallus TI:9031 None |
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ASCC3_CHICK Ensembl» |
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ascc3 | Activating signal cointegrator 1 complex subunit 3 (EC 3.6.4.12) |
Gallus gallus TI:9031 None |
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ASCC3_HUMAN Ensembl» |
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ASCC3 | Activating signal cointegrator 1 complex subunit 3 (EC 3.6.4.12) (ASC-1 complex subunit p200) (ASC1p200) (Helicase, ATP binding 1) (Trip4 complex subunit p200) |
Homo sapiens TI:9606 None |
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HELQ_HUMAN Ensembl» |
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HELQ | Helicase POLQ-like (EC 3.6.4.12) (Mus308-like helicase) (POLQ-like helicase) |
Homo sapiens TI:9606 None |
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U520_HUMAN Ensembl» |
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SNRNP200 | U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13) (Activating signal cointegrator 1 complex subunit 3-like 1) (BRR2 homolog) (U5 snRNP-specific 200 kDa protein) (U5-200KD) |
Homo sapiens TI:9606 None |
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ASCC3_MOUSE Ensembl» |
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Ascc3 | Activating signal cointegrator 1 complex subunit 3 (EC 3.6.4.12) |
Mus musculus TI:10090 None |
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HELQ_MOUSE Ensembl» |
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Helq | Helicase POLQ-like (EC 3.6.4.12) (Mus308-like helicase) (POLQ-like helicase) |
Mus musculus TI:10090 None |
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U520_MOUSE Ensembl» |
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Snrnp200 | U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13) (BRR2 homolog) (U5 snRNP-specific 200 kDa protein) (U5-200KD) |
Mus musculus TI:10090 None |
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ASCC3_RAT RGD» |
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Ascc3 | Activating signal cointegrator 1 complex subunit 3 (EC 3.6.4.12) |
Rattus norvegicus TI:10116 None |
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E9PT19_RAT RGD» |
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Helq | Helicase, POLQ-like |
Rattus norvegicus TI:10116 None |
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U520_RAT RGD» |
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Snrnp200 | U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.4.13) (BRR2 homolog) (U5 snRNP-specific 200 kDa protein) (U5-200KD) |
Rattus norvegicus TI:10116 None |
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BRR2_YEAST SGD» |
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BRR2 | Pre-mRNA-splicing helicase BRR2 (EC 3.6.4.13) (Protein Snu246) |
Saccharomyces cerevisiae TI:4932 None |
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SLH1_YEAST SGD» |
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SLH1 | RQC trigger complex helicase SLH1 (EC 3.6.4.13) (Antiviral helicase SLH1) (SKI2-like helicase 1) |
Saccharomyces cerevisiae TI:4932 None |
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BRR2_SCHPO PomBase» |
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brr2 | Pre-mRNA-splicing factor brr2 (EC 3.6.4.13) (Pre-mRNA-splicing factor spp41) (Pre-mRNA-splicing helicase BRR2) |
Schizosaccharomyces pombe TI:4896 None |
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SLH1_SCHPO PomBase» |
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slh1 | RQC trigger complex helicase slh1 (Meiotically up-regulated gene 81 protein) (Putative helicase mug81) (EC 3.6.4.13) |
Schizosaccharomyces pombe TI:4896 None |
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