Collated Gene Ontology terms

Biological process: metal ion binding(2024) hydrolase activity(2024) cargo adaptor activity(2019, 2024) exonuclease activity(2024) pyridoxal phosphate binding(2024) phosphoric diester hydrolase activity(2017) molybdenum ion binding(2024) manganese ion binding(2017) identical protein binding(2017) catalytic activity(2024)
L-phosphoserine phosphatase activity2024

Molecular function: retrograde transport, endosome to Golgi2006, 2014, 2015, 2016, 2017, 2018, 2024 protein transport2014, 2024 intracellular protein transport2004, 2020, 2024 endocytic recycling2018, 2019, 2024 vacuolar transport2013, 2024 regulation of auxin polar transport2022, 2024 receptor recycling2013, 2024 protein targeting to vacuole2008, 2024 regulation of synaptic vesicle endocytosis2024 regulation of autophagy2016
Golgi to vacuole transport2001, 2021 viral entry into host cell2020 vesicle-mediated transport2014 proteasome-mediated ubiquitin-dependent protein catabolic process2021 exocytosis2021 auxin-activated signaling pathway2024

Cellular component: retromer complex2004, 2006, 2013, 2014, 2018, 2019, 2022, 2023, 2024 endosome2006, 2010, 2014, 2016, 2020, 2024 cytosol2009, 2013, 2014, 2017, 2019, 2023, 2024 endosome membrane2024 membrane2006, 2014, 2024 retromer, cargo-selective complex2013, 2014, 2015, 2016, 2024 intracellular membrane-bounded organelle2012, 2023, 2024 cytoplasm2014, 2018, 2024 multivesicular body2006, 2024 late endosome2024
early endosome2024 nucleus2009, 2024 neuromuscular junction2024 late endosome membrane2014, 2024 protein-containing complex2019 phagolysosome2017 phagocytic vesicle2009 nuclear lumen2018 endomembrane system2018 early phagosome2017 ciliary plasm2018 Golgi apparatus2024

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 2/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 14/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 3/3 
Excavates: 4/4 
Harosa: 4/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 5/8 
Bacteria: 19/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»
Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
YFCE_ECOLI
EnsemblBacteria»
2.4
yfcE Phosphodiesterase YfcE (EC 3.1.4.-) Escherichia coli
TI:562 None
 
VPS29_DICDI
dictyBase»
1.5
vps29 Vacuolar protein sorting-associated
protein 29 (EC 3.1.3.3)
Dictyostelium discoideum
TI:44689 None
 
A0A8V1A3E4_CHICK
Ensembl»
0.0
VPS29 Vacuolar protein sorting-associated protein
29 (Vesicle protein sorting 29)
Gallus gallus
TI:9031 None
   
A0A8V1A3P0_CHICK
Ensembl»
0.0
VPS29L Vacuolar protein sorting-associated protein
29 (Vesicle protein sorting 29)
Gallus gallus
TI:9031 None
   
Q86D99_CAEEL
WormBase»
1.0
vps-29 Vacuolar protein sorting-associated protein
29 (Vesicle protein sorting 29)
Caenorhabditis elegans
TI:6239 None
 
Q9VPX5_DROME
FlyBase»
3.6
Vps29 Vacuolar protein sorting-associated protein
29 (Vesicle protein sorting 29)
Drosophila melanogaster
TI:7227 None
 
VPS29_CHICK
CTD»
1.5
VPS29 Vacuolar protein sorting-associated protein
29 (Vesicle protein sorting 29)
Gallus gallus
TI:9031 None
 
VPS29_DANRE
ZFIN»
1.5
vps29 Vacuolar protein sorting-associated protein
29 (Vesicle protein sorting 29)
Danio rerio
TI:7955 None
 
VPS29_MOUSE
Ensembl»
1.0
Vps29 Vacuolar protein sorting-associated protein
29 (Vesicle protein sorting 29)
Mus musculus
TI:10090 None
 
VPS29_RAT
RGD»
2.5
Vps29 Vacuolar protein sorting-associated protein
29 (Vesicle protein sorting 29)
Rattus norvegicus
TI:10116 None
 
VPS29_SCHPO
PomBase»
2.6
vps29 Vacuolar protein sorting-associated protein 29 Schizosaccharomyces pombe
TI:4896 None
 
VPS29_YEAST
SGD»
4.6
VPS29 Vacuolar protein sorting-associated protein 29 (Carboxypeptidase
Y-deficient protein 11) (Vesicle protein sorting 29)
Saccharomyces cerevisiae
TI:4932 None
 
VPS29_ARATH
TAIR»
3.2
VPS29 Vacuolar protein sorting-associated protein 29 (Protein
MAIGO 1) (Vesicle protein sorting 29)
Arabidopsis thaliana
TI:3702 None
 
VPS29_HUMAN
Ensembl»
3.2
VPS29 Vacuolar protein sorting-associated protein 29 (hVPS29)
(PEP11 homolog) (Vesicle protein sorting 29)
Homo sapiens
TI:9606 None