Collated Gene Ontology terms

Biological process: RNA binding(2014)

Molecular function: rRNA processing2010, 2011, 2024 ribosomal small subunit biogenesis2023, 2024 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2013, 2024 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2013, 2024 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2013, 2024 RNA fragment catabolic process2016, 2024 intraciliary transport involved in cilium assembly2024 ribosome biogenesis2024 ribosomal large subunit assembly2021 neuroblast proliferation2010
maturation of SSU-rRNA2023 female germ-line stem cell asymmetric division2010

Cellular component: nucleolus2010, 2016, 2017, 2018, 2023, 2024 small-subunit processome2013, 2014, 2023, 2024 Pwp2p-containing subcomplex of 90S preribosome2013, 2017, 2018, 2024 nucleus2005, 2010, 2017, 2024 nucleoplasm2015, 2023, 2024 nuclear membrane2023, 2024 ribonucleoprotein complex2024 ciliary tip2024 ciliary pocket collar2024 ciliary basal body2024
9+2 motile cilium2024 small nuclear ribonucleoprotein complex2010 organelle2024 germinal vesicle2010 Cul4-RING E3 ubiquitin ligase complex2008 90S preribosome2018

Phylogenetic distribution

Chordates: 21/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 2/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 14/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 3/3 
Excavates: 4/4 
Harosa: 3/4 
Hacrobia: 0/0 
Plants: 35/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
W1NGL8_AMBTC
EnsemblPlants»
0.0
AMTR_s00010p00244300 Uncharacterized protein Amborella trichopoda
TI:13333 None
 
G1KAS0_ANOCA
Ensembl»
0.0
UTP18 UTP18 small subunit processome component Anolis carolinensis
TI:28377 None
   
A0A1S4H006_ANOGA
EnsemblMetazoa»
0.0
Uncharacterized protein Anopheles gambiae
TI:7165 None
 
UTP18_ARATH
TAIR»
0.0
At5g14050 U3 small nucleolar
RNA-associated protein 18 homolog		 Arabidopsis thaliana
TI:3702 None
 
Q758A5_ASHGO
EnsemblFungi»
0.0
AGOS_AEL153W AEL153Wp Ashbya gossypii
TI:33169 None
 
Q4WHC1_ASPFU
EnsemblFungi»
0.0
AFUA_2G05930 Small nucleolar ribonucleoprotein
complex subunit, putative		 Aspergillus fumigatus
TI:746128 None
 
F4PD01_BATDJ
EnsemblBacteria»
0.0
BATDEDRAFT_14441 Uncharacterized protein Batrachochytrium dendrobatidis
TI:109871 None
 
I1HH75_BRADI
EnsemblPlants»
0.0
100834791 Uncharacterized protein Brachypodium distachyon
TI:15368 None
 
A0A9J7N559_BRAFL
CTD»
0.0
LOC118426588 U3 small nucleolar
RNA-associated protein 18 homolog		 Branchiostoma floridae
TI:7739 None
   
M4CX36_BRACM
EnsemblPlants»
0.0
Uncharacterized protein Brassica campestris
TI:3711 None
   
M4E3U4_BRACM
EnsemblPlants»
0.0
Uncharacterized protein Brassica campestris
TI:3711 None
   
A8XPJ6_CAEBR
WormBase»
0.0
CBG16596 CBG_16596 Protein CBG16596 Caenorhabditis briggsae
TI:6238 None
 
UTP18_CAEEL
WormBase»
0.0
B0280.9 U3 small nucleolar
RNA-associated protein 18 homolog		 Caenorhabditis elegans
TI:6239 None
 
A0A1D8PRJ5_CANAL
EnsemblFungi»
0.0
UTP18 Utp18p Candida albicans
TI:5476 None
 
A0A8I3NXV0_CANLF
Ensembl»
0.0
UTP18 UTP18 small subunit processome component Canis lupus
TI:9612 None
   
A0A2K3DMD4_CHLRE
EnsemblPlants»
0.0
CHLRE_06g255950v5 Uncharacterized protein Chlamydomonas reinhardtii
TI:3055 None
 
H2XTN0_CIOIN
Ensembl»
0.0
Anaphase-promoting complex subunit
4 WD40 domain-containing protein		 Ciona intestinalis
TI:7719 None
 
A0A067FMD9_CITSI
Ensembl»
0.0
CISIN_1g043172mg Uncharacterized protein Citrus sinensis
TI:2711 None
 
Q5KMY6_CRYNJ
EnsemblFungi»
0.0
CNB00040 WD-repeat protein, putative Cryptococcus neoformans
TI:5207 None
 
A0A0A0LMJ5_CUCSA
EnsemblPlants»
0.0
Csa_2G279240 Uncharacterized protein Cucumis sativus
TI:3659 None
 
Q08C85_DANRE
ZFIN»
0.0
zgc:153384 U3 small nucleolar RNA-associated protein
18 homolog (Zgc:153384) (Zgc:153384 protein)		 Danio rerio
TI:7955 None
 
E9GXY4_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_306709 Uncharacterized protein Daphnia pulex
TI:6669 None
 
F1A4C6_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_159528 Anaphase-promoting complex subunit
4 WD40 domain-containing protein		 Dictyostelium purpureum
TI:5786 None
 
Q55BA1_DICDI
dictyBase»
0.0
utp18 WD40 repeat-containing protein Dictyostelium discoideum
TI:44689 None
 
UTP18_DROME
FlyBase»
2.4
wcd U3 small nucleolar RNA-associated protein 18
homolog (Protein wicked) (WD repeat protein l(2)k07824)		 Drosophila melanogaster
TI:7227 None
 
Q5AW72_EMENI
EnsemblFungi»
0.0
ANIA_07458 Small nucleolar ribonucleoprotein complex
subunit, putative (AFU_orthologue AFUA_2G05930)		 Emericella nidulans
TI:162425 None
 
C4LVK6_ENTH1
EnsemblProtists»
0.0
EHI_103620 WD domain containing protein Entamoeba histolytica
TI:5759 None
 
F6WB76_HORSE
Ensembl»
0.0
UTP18 UTP18 small subunit processome component Equus caballus
TI:9796 None
   
A0A022PQ89_ERYGU
EnsemblFungi»
0.0
MIMGU_mgv1a003959mg Uncharacterized protein Erythranthe guttata
TI:4155 None
 
A0A5F5XDR8_FELCA
Ensembl»
0.0
UTP18 UTP18 small subunit processome component Felis catus
TI:9685 None
 
A0A8V1AGS5_CHICK
Ensembl»
0.0
UTP18 UTP18 small subunit processome component Gallus gallus
TI:9031 None
   
A8BMY9_GIAIC
EnsemblProtists»
0.0
GL50803_0014641 GL50803_14641 Transducin Giardia intestinalis
TI:5741 None
 
I1M2L4_SOYBN
EnsemblPlants»
0.0
100806692 Uncharacterized protein Glycine max
TI:3847 None
 
I1ME19_SOYBN
EnsemblPlants»
0.0
100806023 Uncharacterized protein Glycine max
TI:3847 None
 
A0A2I2ZF73_GORGO
Ensembl»
0.0
UTP18 small subunit processome component Gorilla gorilla
TI:9593 None
 
G3RLK3_GORGO
Ensembl»
0.0
UTP18 UTP18 small subunit processome component Gorilla gorilla
TI:9593 None
 
A0A1U8IU12_GOSHI
Ensembl»
0.0
LOC107898850 U3 small nucleolar
RNA-associated protein 18 homolog		 Gossypium hirsutum
TI:3635 None
   
A0A1U8MC32_GOSHI
Ensembl»
0.0
LOC107936215 U3 small nucleolar
RNA-associated protein 18 homolog		 Gossypium hirsutum
TI:3635 None
   
A0A1U8MMH7_GOSHI
Ensembl»
0.0
LOC107939250 LOW QUALITY PROTEIN: U3 small
nucleolar RNA-associated protein 18 homolog		 Gossypium hirsutum
TI:3635 None
   
A0A1U8MYY3_GOSHI
Ensembl»
0.0
LOC107941703 U3 small nucleolar
RNA-associated protein 18 homolog		 Gossypium hirsutum
TI:3635 None
   
A0A251SKY7_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr14g0454081 Putative transducin/WD40
repeat-like superfamily protein		 Helianthus annuus
TI:4232 None
 
A0A9K3DYP9_HELAN
EnsemblPlants»
0.0
HanXRQr2_Chr15g0675151 Transcription factor WD40-like family Helianthus annuus
TI:4232 None
 
T1EKH1_HELRO
EnsemblMetazoa»
0.0
20197071 Uncharacterized protein Helobdella robusta
TI:6412 None
 
UTP18_HUMAN
Ensembl»
1.3
UTP18 U3 small nucleolar RNA-associated protein
18 homolog (WD repeat-containing protein 50)		 Homo sapiens
TI:9606 None
 
A0A8I6YAC7_HORVV
EnsemblPlants»
0.0
U3 small nucleolar
RNA-associated protein 18 homolog		 Hordeum vulgare
TI:4513 None
   
F2DJG1_HORVV
EnsemblPlants»
0.0
Predicted protein Hordeum vulgare
TI:4513 None
 
B7PJ27_IXOSC
EnsemblMetazoa»
0.0
IscW_ISCW024250 U3 small nucleolar RNA-associated protein 18 Ixodes scapularis
TI:6945 None
 
B7Q6Q0_IXOSC
EnsemblMetazoa»
0.0
IscW_ISCW011119 Uncharacterized protein Ixodes scapularis
TI:6945 None 		 
 
A0A2I4F6L5_JUGRE
EnsemblPlants»
0.0
LOC108996020 U3 small nucleolar
RNA-associated protein 18 homolog		 Juglans regia
TI:51240 None
 
A0A1Y1IIE5_KLENI
EnsemblPlants»
0.0
KFL_006700030 WD40 repeat protein Klebsormidium nitens
TI:105231 None
 
Q4Q0V6_LEIMA
EnsemblProtists»
0.0
LMJF_36_4580 Uncharacterized protein Leishmania major
TI:5664 None
 
W5MYX7_LEPOC
Ensembl»
0.0
UTP18 UTP18 small subunit processome component Lepisosteus oculatus
TI:7918 None
 
A0A5F7ZSI1_MACMU
Ensembl»
0.0
UTP18 UTP18 small subunit processome component Macaca mulatta
TI:9544 None
   
A0A251IXX7_MANES
EnsemblPlants»
0.0
MANES_16G024300 Uncharacterized protein Manihot esculenta
TI:3983 None
 
A0A2R6WX72_MARPO
EnsemblPlants»
0.0
MARPO_0051s0055 Uncharacterized protein Marchantia polymorpha
TI:3197 None
 
G7IS79_MEDTR
EnsemblPlants»
0.0
11425141 U3 small nucleolar RNA-associated-like protein Medicago truncatula
TI:3880 None
 
Q2HU46_MEDTR
EnsemblPlants»
0.0
11442001 Putative transcription factor WD40-like family
(U3 small nucleolar RNA-associated-like protein) (WD40-like)		 Medicago truncatula
TI:3880 None
 
F6PLP2_MONDO
Ensembl»
0.0
UTP18 UTP18 small subunit processome component Monodelphis domestica
TI:13616 None
   
A9UP73_MONBE
EnsemblProtists»
0.0
MONBRDRAFT_13410 F5/8 type C domain-containing protein Monosiga brevicollis
TI:81824 None
 
UTP18_MOUSE
Ensembl»
0.5
Utp18 U3 small nucleolar RNA-associated protein
18 homolog (WD repeat-containing protein 50)		 Mus musculus
TI:10090 None
 
A0A804JK21_MUSAM
EnsemblPlants»
0.0
Uncharacterized protein Musa acuminata
TI:4641 None
   
A0A1U8B0A7_NELNU
EnsemblBacteria»
0.0
LOC104609476 U3 small nucleolar
RNA-associated protein 18 homolog		 Nelumbo nucifera
TI:4432 None
   
A7RNF9_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g87666 U3 small nucleolar
RNA-associated protein 18 homolog		 Nematostella vectensis
TI:45351 None
 
Q7SGZ8_NEUCR
EnsemblFungi»
0.0
NCU03018 Small nucleolar
ribonucleoprotein complex subunit		 Neurospora crassa
TI:5141 None
 
A0A1S3XIW1_TOBAC
EnsemblFungi»
0.0
LOC107765637 U3 small nucleolar
RNA-associated protein 18 homolog		 Nicotiana tabacum
TI:4097 None
   
A0A1S4AJI8_TOBAC
EnsemblFungi»
0.0
LOC107798399 U3 small nucleolar
RNA-associated protein 18 homolog		 Nicotiana tabacum
TI:4097 None
   
A0A1S4AMZ6_TOBAC
EnsemblFungi»
0.0
LOC107799409 U3 small nucleolar
RNA-associated protein 18 homolog		 Nicotiana tabacum
TI:4097 None
   
A0A1S4BSB1_TOBAC
EnsemblFungi»
0.0
LOC107811299 U3 small nucleolar
RNA-associated protein 18 homolog		 Nicotiana tabacum
TI:4097 None
   
F6YWL4_ORNAN
Ensembl»
0.0
UTP18 small subunit processome component Ornithorhynchus anatinus
TI:9258 None
   
Q6YW01_ORYSJ
EnsemblPlants»
0.0
Os07g0603200 Os07g0603200 protein (cDNA
clone:001-124-C09, full insert sequence)		 Oryza sativa
TI:4530 None
 
H2MX52_ORYLA
Ensembl»
0.0
utp18 UTP18 small subunit processome component Oryzias latipes
TI:8090 None
   
A0A2I3STN6_PANTR
Ensembl»
0.0
LOC455135 Uncharacterized protein Pan troglodytes
TI:9598 None
 
A0A2I3TUR4_PANTR
Ensembl»
0.0
UTP18 Pan troglodytes
TI:9598 None
 
K7BMK0_PANTR
Ensembl»
0.0
UTP18 UTP18, small subunit
(SSU) processome component, homolog		 Pan troglodytes
TI:9598 None
 
A0CV04_PARTE
EnsemblProtists»
0.0
GSPATT00010789001 Chromosome undetermined scaffold_29,
whole genome shotgun sequence		 Paramecium tetraurelia
TI:5888 None
 
A0D8G8_PARTE
EnsemblProtists»
0.0
GSPATT00014281001 Chromosome undetermined scaffold_41,
whole genome shotgun sequence		 Paramecium tetraurelia
TI:5888 None
 
A0A2K1IBW6_PHYPA
EnsemblPlants»
0.0
PHYPA_030237 Uncharacterized protein Physcomitrium patens
TI:3218 None
 
H3HC64_PHYRM
EnsemblProtists»
0.0
Uncharacterized protein Phytophthora ramorum
TI:164328 None
 
Q8I5H3_PLAF7
EnsemblProtists»
0.0
PF3D7_1224400 WD repeat-containing protein, putative Plasmodium falciparum
TI:5833 None
 
A0A3N7EH18_POPTR
EnsemblPlants»
0.0
POPTR_002G044632 Uncharacterized protein Populus trichocarpa
TI:3694 None
 
A0A3N7ENV4_POPTR
EnsemblPlants»
0.0
POPTR_002G044566 Uncharacterized protein Populus trichocarpa
TI:3694 None
 
B9H8H4_POPTR
EnsemblPlants»
0.0
POPTR_005G218600 Uncharacterized protein Populus trichocarpa
TI:3694 None
 
M5VNA5_PRUPE
EnsemblPlants»
0.0
PRUPE_8G231800 Uncharacterized protein Prunus persica
TI:3760 None
 
M5W931_PRUPE
EnsemblPlants»
0.0
PRUPE_5G054300 Uncharacterized protein Prunus persica
TI:3760 None
 
E3JTR5_PUCGT
EnsemblFungi»
0.0
PGTG_00813 Uncharacterized protein Puccinia graminis
TI:5297 None
 
A0A8I5ZPJ9_RAT
RGD»
0.5
Utp18 UTP18 small subunit processome component Rattus norvegicus
TI:10116 None
   
B9S4S8_RICCO
EnsemblBacteria»
0.0
RCOM_0992180 Nucleotide binding protein, putative Ricinus communis
TI:3988 None
 
UTP18_YEAST
SGD»
3.8
UTP18 U3 small nucleolar RNA-associated protein 18 (U3
snoRNA-associated protein 18) (U three protein 18)		 Saccharomyces cerevisiae
TI:4932 None
 
B6JVX3_SCHJY
EnsemblFungi»
0.0
SJAG_00538 CGI-48 family protein Schizosaccharomyces japonicus
TI:4897 None
 
UTP18_SCHPO
PomBase»
0.5
SPBC29A3.06 Probable U3 small nucleolar RNA-associated
protein 18 (U3 snoRNA-associated protein 18)		 Schizosaccharomyces pombe
TI:4896 None
 
A7EFY2_SCLS1
EnsemblFungi»
0.0
SS1G_04223 F-box domain-containing protein Sclerotinia sclerotiorum
TI:5180 None
 
A7EX29_SCLS1
VEuPathDB»
0.0
SS1G_09888 Uncharacterized protein Sclerotinia sclerotiorum
TI:5180 None
 
D8QZ62_SELML
EnsemblPlants»
0.0
SELMODRAFT_438755 Uncharacterized protein Selaginella moellendorffii
TI:88036 None
 
D8R9Z7_SELML
EnsemblPlants»
0.0
SELMODRAFT_169308 Uncharacterized protein Selaginella moellendorffii
TI:88036 None
 
K3XW63_SETIT
EnsemblPlants»
0.0
101772287 Uncharacterized protein Setaria italica
TI:4555 None
 
A0A3Q7IKL2_SOLLC
EnsemblPlants»
0.0
Uncharacterized protein Solanum lycopersicum
TI:4081 None
   
M1C6M2_SOLTU
EnsemblPlants»
0.0
102587394 Nucleotide binding protein Solanum tuberosum
TI:4113 None
   
A0A1W0VUX9_SORBI
EnsemblPlants»
0.0
SORBI_3010G262650 Uncharacterized protein Sorghum bicolor
TI:4558 None
 
C5XMN7_SORBI
EnsemblPlants»
0.0
SORBI_3003G041500 Uncharacterized protein Sorghum bicolor
TI:4558 None
 
C5Z1T0_SORBI
EnsemblPlants»
0.0
SORBI_3010G262800 Uncharacterized protein Sorghum bicolor
TI:4558 None
 
A0A7M7NLF9_STRPU
EnsemblMetazoa»
0.0
U3 small nucleolar
RNA-associated protein 18 homolog		 Strongylocentrotus purpuratus
TI:7668 None
   
F1RSH4_PIG
Ensembl»
0.0
UTP18 U3 small nucleolar RNA-associated protein 18
homolog (UTP18 small subunit processome component)		 Sus scrofa
TI:9823 None
 
A0A061DLK8_THECC
EnsemblPlants»
0.0
TCM_001828 Transducin/WD40 repeat-like superfamily protein Theobroma cacao
TI:3641 None
 
A0A061ES71_THECC
EnsemblPlants»
0.0
TCM_021698 Transducin/WD40 repeat-like superfamily protein Theobroma cacao
TI:3641 None
 
D6WBP4_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_00267 U3 small nucleolar RNA-associated
protein 18 homolog-like Protein		 Tribolium castaneum
TI:7070 None
 
A2EE03_TRIV3
VEuPathDB»
0.0
TVAG_230750 Anaphase-promoting complex subunit
4 WD40 domain-containing protein		 Trichomonas vaginalis
TI:5722 None
 
B3RXX8_TRIAD
EnsemblMetazoa»
0.0
TRIADDRAFT_56366 Uncharacterized protein Trichoplax adhaerens
TI:10228 None
 
A0A3B6KPD0_WHEAT
EnsemblPlants»
0.0
CFC21_068199 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A3B6LV42_WHEAT
EnsemblPlants»
0.0
CFC21_073987 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A3B6MZF2_WHEAT
EnsemblPlants»
0.0
CFC21_080035 Uncharacterized protein Triticum aestivum
TI:4565 None
 
Q389Y4_TRYB2
VEuPathDB»
0.0
Tb10.6k15.0360 U3 small nucleolar RNA-associated protein 18 Trypanosoma brucei
TI:5691 None
 
F6GXL7_VITVI
EnsemblPlants»
0.0
VIT_07s0141g00380 Uncharacterized protein Vitis vinifera
TI:29760 None
 
F6HWI5_VITVI
EnsemblPlants»
0.0
VIT_07s0141g00530 Uncharacterized protein Vitis vinifera
TI:29760 None
 
A0A1L8ETM1_XENLA
Xenbase»
0.0
utp18.L UTP18 small subunit processome
component L homeolog isoform X1		 Xenopus laevis
TI:8355 None
   
Q28IF6_XENTR
Xenbase»
0.0
utp18 U3 small nucleolar RNA-associated protein 18 homolog isoform X1
(UTP18 small subunit processome component) (WD repeat domain 50)		 Xenopus tropicalis
TI:8364 None
 
Q6BZR5_YARLI
EnsemblFungi»
0.0
YALI0_F31471g YALI0F31471p Yarrowia lipolytica
TI:4952 None
 
A0A804PD56_MAIZE
EnsemblPlants»
0.0
Uncharacterized protein Zea mays
TI:4577 None
   
B4FFH2_MAIZE
EnsemblPlants»
0.0
100193563 U3 small nucleolar
RNA-associated protein 18-like protein		 Zea mays
TI:4577 None
 
A0A0K9NRJ1_ZOSMR
EnsemblPlants»
0.0
ZOSMA_74G00230 U3 small nucleolar
RNA-associated protein-like protein		 Zostera marina
TI:29655 None
 
A0A0K9PTA3_ZOSMR
EnsemblPlants»
0.0
ZOSMA_17G00250 U3 small nucleolar RNA-associated protein Zostera marina
TI:29655 None