Collated Gene Ontology terms

Biological process: structural molecule activity(2023)

Molecular function: intracellular protein transport2009, 2023 vesicle-mediated transport2014, 2023 protein transport2023 intra-Golgi vesicle-mediated transport2005, 2017, 2023 endoplasmic reticulum to Golgi vesicle-mediated transport2002, 2005, 2017, 2023 somite development2015, 2023 notochord development2015, 2023 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum2005, 2007, 2014 intracellular mRNA localization2020, 2023 regulation of lipid storage2010
positive regulation of innate immune response2013 negative regulation of viral entry into host cell2020 defense response to Gram-negative bacterium2013 cell morphogenesis2011

Cellular component: COPI vesicle coat2005, 2014, 2020, 2023 cytoplasm2023 membrane2014, 2023 membrane coat2023 Golgi membrane2015, 2023 COPI-coated vesicle membrane2023 Golgi apparatus2003, 2006, 2009, 2023 cytoplasmic vesicle2023 cytosol2009, 2013, 2023 intracellular membrane-bounded organelle2023
endoplasmic reticulum-Golgi intermediate compartment2023 COPI-coated vesicle2010, 2023 plasma membrane2014, 2016, 2019, 2023 Golgi-associated vesicle2003, 2005, 2023 perinuclear region of cytoplasm2009, 2023 transport vesicle2015 tertiary granule membrane2016 secretory granule membrane2016 plasmodesma2021 ficolin-1-rich granule membrane2016 endoplasmic reticulum membrane2015 endoplasmic reticulum2023 endomembrane system2023 COPII-coated ER to Golgi transport vesicle2005

Phylogenetic distribution

Chordates: 21/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 16/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 3/3 
Excavates: 3/4 
Harosa: 4/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2012 2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 0 2 4 6 8 10 Knownness

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
COPB1_ARATH
TAIR»
0.0
At4g31480 Coatomer subunit beta-1 (Beta-coat
protein 1) (Beta-COP 1)		 Arabidopsis thaliana
TI:3702 None
 
COPB2_ARATH
TAIR»
0.0
At4g31490 Coatomer subunit beta-2 (Beta-coat
protein 2) (Beta-COP 2)		 Arabidopsis thaliana
TI:3702 None
 
Q9TYL9_CAEEL
WormBase»
1.0
copb-1 Coatomer subunit beta (Beta-coat protein) Caenorhabditis elegans
TI:6239 None
 
COPB_DANRE
ZFIN»
2.6
copb1 Coatomer subunit beta
(Beta-coat protein) (Beta-COP)		 Danio rerio
TI:7955 None
 
COPB_DICDI
dictyBase»
1.0
copb Coatomer subunit beta
(Beta-coat protein) (Beta-COP)		 Dictyostelium discoideum
TI:44689 None
 
COPB_DROME
FlyBase»
4.1
betaCOP Coatomer subunit beta
(Beta-coat protein) (Beta-COP)		 Drosophila melanogaster
TI:7227 None
 
COPB_CHICK
Ensembl»
1.0
COPB1 Coatomer subunit beta
(Beta-coat protein) (Beta-COP)		 Gallus gallus
TI:9031 None
 
COPB_HUMAN
Ensembl»
1.5
COPB1 Coatomer subunit beta
(Beta-coat protein) (Beta-COP)		 Homo sapiens
TI:9606 None
 
COPB_MOUSE
Ensembl»
1.5
Copb1 Coatomer subunit beta
(Beta-coat protein) (Beta-COP)		 Mus musculus
TI:10090 None
 
COPB_RAT
RGD»
2.7
Copb1 Coatomer subunit beta
(Beta-coat protein) (Beta-COP)		 Rattus norvegicus
TI:10116 None
 
COPB_YEAST
SGD»
3.2
SEC26 Coatomer subunit beta
(Beta-coat protein) (Beta-COP)		 Saccharomyces cerevisiae
TI:4932 None
 
COPB_SCHPO
PomBase»
2.1
sec26 Coatomer subunit beta
(Beta-coat protein) (Beta-COP)		 Schizosaccharomyces pombe
TI:4896 None