Collated Gene Ontology terms

Biological process: RNA binding(2014, 2024) protein-membrane adaptor activity(2024)

Molecular function: maturation of LSU-rRNA2017, 2024 maturation of 5.8S rRNA2017, 2024 mRNA processing2024 mRNA export from nucleus2009, 2017, 2024 ribosomal large subunit biogenesis2006, 2013, 2024 mRNA transport2024 RNA splicing2024 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2013, 2024 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2013, 2024 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021
mRNA export from nucleus in response to heat stress2016 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2021 autophagosome assembly2024 assembly of large subunit precursor of preribosome2024

Cellular component: nucleus2009, 2011, 2015, 2017, 2024 nucleolus2006, 2013, 2017, 2023, 2024 THO complex part of transcription export complex2009, 2017, 2024 preribosome, large subunit precursor2013, 2017, 2024 cytoplasm2015, 2024 nuclear speck2023, 2024 THO complex2009, 2011, 2014, 2024 transcription export complex2009, 2016, 2024 intracellular membrane-bounded organelle2023, 2024 cytosol2009, 2023, 2024
chromosome, telomeric region2016, 2024 membrane2024 protein-containing complex2011 phagophore assembly site membrane2024 nucleoplasm2015 autophagosome membrane2024 Atg12-Atg5-Atg16 complex2024

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 14/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 3/3 
Excavates: 4/4 
Harosa: 4/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
F4I4Q1_ARATH
TAIR»
0.0
At1g23280 Protein MAK16 homolog Arabidopsis thaliana
TI:3702 None
 
THO7A_ARATH
TAIR»
0.0
THO7A THO complex subunit 7A
(THO complex subunit 7) (AtTHO7)		 Arabidopsis thaliana
TI:3702 None
 
THO7B_ARATH
TAIR»
0.0
THO7B THO complex subunit 7B
(THO complex subunit 7) (AtTHO7)		 Arabidopsis thaliana
TI:3702 None
 
Q18035_CAEEL
WormBase»
1.0
C16A3.6 CELE_C16A3.6 Protein MAK16 homolog Caenorhabditis elegans
TI:6239 None
 
MAK16_DANRE
ZFIN»
1.0
mak16 Protein MAK16 homolog
(MAK16-like protein) (Protein RBM13)		 Danio rerio
TI:7955 None
 
THOC7_DANRE
ZFIN»
0.5
thoc7 THO complex subunit 7 homolog Danio rerio
TI:7955 None
 
MAK16_DICDI
dictyBase»
1.5
mak16l Protein MAK16 homolog (MAK16-like protein) Dictyostelium discoideum
TI:44689 None
 
Q9W3B2_DROME
FlyBase»
1.0
Rbm13 Protein MAK16 homolog Drosophila melanogaster
TI:7227 None
 
THOC7_DROME
FlyBase»
1.5
thoc7 THO complex protein 7 Drosophila melanogaster
TI:7227 None
 
A0A8V0Z2I9_CHICK
Ensembl»
0.0
MAK16 Protein MAK16 homolog Gallus gallus
TI:9031 None
   
F1N915_CHICK
Ensembl»
0.0
THOC7 THO complex subunit 7 homolog Gallus gallus
TI:9031 None
   
MAK16_HUMAN
Ensembl»
1.5
MAK16 Protein MAK16 homolog (NNP78) (Protein RBM13) Homo sapiens
TI:9606 None
 
THOC7_HUMAN
Ensembl»
1.3
THOC7 THO complex subunit 7 homolog (Functional spliceosome-associated protein 24) (fSAP24)
(Ngg1-interacting factor 3-like protein 1-binding protein 1) (NIF3L1-binding protein 1) (hTREX30)		 Homo sapiens
TI:9606 None
 
MAK16_MOUSE
Ensembl»
0.0
Mak16 Protein MAK16 homolog (Protein RBM13) Mus musculus
TI:10090 None
 
THOC7_MOUSE
Ensembl»
0.0
Thoc7 THO complex subunit 7 homolog (Ngg1-interacting
factor 3-like protein 1-binding protein 1)		 Mus musculus
TI:10090 None
 
A0A8I6ABD9_RAT
RGD»
1.0
Thoc7 THO complex subunit 7 homolog Rattus norvegicus
TI:10116 None
   
A6IVV8_RAT
RGD»
1.0
Mak16 Protein MAK16 homolog Rattus norvegicus
TI:10116 None
 
MAK16_YEAST
SGD»
3.4
MAK16 Protein MAK16 (Maintenance of killer protein 16) Saccharomyces cerevisiae
TI:4932 None
 
MAK16_SCHPO
PomBase»
1.8
mak16 Protein mak16 Schizosaccharomyces pombe
TI:4896 None