Collated Gene Ontology terms

Biological process: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen(2024) iron ion binding(2024) dioxygenase activity(2024) L-ascorbic acid binding(2024) metal ion binding(2024) tRNA binding(2012, 2015, 2017, 2024) procollagen-lysine 5-dioxygenase activity(2024) RNA binding(2014, 2015) glycosyltransferase activity(2024) mRNA binding(2023)

Molecular function: tRNA 3'-end processing2012, 2015, 2017, 2024 mitochondrial translation2018, 2024 tRNA processing2024 defense response to other organism2024

Cellular component: mitochondrial matrix2012, 2015, 2017, 2024 mitochondrion2012, 2015, 2024 nucleus2018, 2024 nucleoplasm2018, 2024 membrane2024

Phylogenetic distribution

Chordates: 20/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 0/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 0/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 1/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 0/4 
Hacrobia: 0/0 
Plants: 35/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

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Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
PTCD1_HUMAN
Ensembl»
3.1
PTCD1 Pentatricopeptide repeat-containing
protein 1, mitochondrial		 Homo sapiens
TI:9606 None
 
PTCD1_RAT
RGD»
2.0
Ptcd1 Pentatricopeptide repeat-containing
protein 1, mitochondrial		 Rattus norvegicus
TI:10116 None
 
CP2_ARATH
TAIR»
0.0
CP2 2-oxoglutarate and iron-dependent oxygenase domain-containing protein
CP2 (EC 1.14.11.-) (Protein CUPULIFORMIS 2)		 Arabidopsis thaliana
TI:3702 None
 
ICU11_ARATH
TAIR»
0.0
ICU11 2-oxoglutarate and iron-dependent oxygenase domain-containing protein
ICU11 (EC 1.14.11.-) (Protein INCURVATA 11)		 Arabidopsis thaliana
TI:3702 None
 
PTCD1_MOUSE
Ensembl»
1.8
Ptcd1 Pentatricopeptide repeat-containing
protein 1, mitochondrial		 Mus musculus
TI:10090 None
 
F1NIF9_CHICK
Ensembl»
1.0
PTCD1 Pentatricopeptide repeat domain 1 Gallus gallus
TI:9031 None
   
Q9VRJ7_DROME
FlyBase»
2.0
Dmel\CG4611 RE45108p Drosophila melanogaster
TI:7227 None
 
A0A8V1A866_CHICK
Ensembl»
0.0
OGFOD2 2-oxoglutarate and iron dependent
oxygenase domain containing 2		 Gallus gallus
TI:9031 None
   
B0G0Z0_DICDI
dictyBase»
0.0
DDB_G0270778 Fe2OG dioxygenase domain-containing protein Dictyostelium discoideum
TI:44689 None
 
OGFD2_DANRE
ZFIN»
0.0
ogfod2 2-oxoglutarate and iron-dependent oxygenase
domain-containing protein 2 (EC 1.14.11.-)		 Danio rerio
TI:7955 None
 
OGFD2_HUMAN
Ensembl»
0.0
OGFOD2 2-oxoglutarate and iron-dependent oxygenase
domain-containing protein 2 (EC 1.14.11.-)		 Homo sapiens
TI:9606 None
 
OGFD2_MOUSE
Ensembl»
0.0
Ogfod2 2-oxoglutarate and iron-dependent oxygenase
domain-containing protein 2 (EC 1.14.11.-)		 Mus musculus
TI:10090 None
 
A0A1P8ARQ3_ARATH
TAIR»
0.0
CP5 2-oxoglutarate (2OG) and
Fe(II)-dependent oxygenase superfamily protein		 Arabidopsis thaliana
TI:3702 None
 
F4K794_ARATH
TAIR»
0.0
CP3 2-oxoglutarate (2OG) and
Fe(II)-dependent oxygenase superfamily protein		 Arabidopsis thaliana
TI:3702 None
 
Q0WLF0_ARATH
TAIR»
0.0
CP4 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein (Uncharacterized protein At1g48740)		 Arabidopsis thaliana
TI:3702 None
 
A0A2R8RTA8_DANRE
Ensembl»
1.0
ptcd1 Pentatricopeptide repeat domain 1 (Pentatricopeptide
repeat-containing protein 1, mitochondrial isoform X1)		 Danio rerio
TI:7955 None
 
F4HV54_ARATH
TAIR»
0.0
At1g47940 Pentatricopeptide repeat
(PPR) superfamily protein		 Arabidopsis thaliana
TI:3702 None 		 
   
Q55A69_DICDI
dictyBase»
0.0
DDB_G0272088 Uncharacterized protein Dictyostelium discoideum
TI:44689 None