Collated Gene Ontology terms

Biological process: DNA binding(2024) histone methyltransferase binding(2012, 2024) translation repressor activity(2006)

Molecular function: mRNA splicing, via spliceosome2010, 2015, 2020, 2024 spliceosomal complex disassembly2024 positive regulation of transcription by RNA polymerase II2012, 2020, 2024 transcription by RNA polymerase II2012, 2024 spliceosomal complex assembly2014, 2024 regulation of skeletal muscle satellite cell proliferation2012, 2024 positive regulation of myoblast proliferation2012, 2024 muscle organ development2024 mRNA processing2024 RNA splicing2024
negative regulation of translation2024 negative regulation of DNA-templated transcription2011 DNA endoreduplication2006

Cellular component: nucleus2006, 2012, 2014, 2020, 2024 U2-type post-mRNA release spliceosomal complex2014, 2024 nucleolus2014, 2024 nucleoplasm2016, 2023, 2024 cytosol2008, 2023, 2024 precatalytic spliceosome2010 membrane2024 catalytic step 2 spliceosome2010

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 5/5 
Tardigrades: 0/0 
Placozoa: 1/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 7/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 2/3 
Excavates: 0/4 
Harosa: 1/4 
Hacrobia: 0/0 
Plants: 37/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Show all] GO terms Seq. links Protein domain links
PAXB1_HUMAN
Ensembl»
0.5
PAXBP1 PAX3- and PAX7-binding protein 1
(GC-rich sequence DNA-binding factor 1)		 Homo sapiens
TI:9606 None
 
GCFC2_HUMAN
Ensembl»
1.3
GCFC2 Intron Large complex component GCFC2 (GC-rich sequence DNA-binding factor)
(GC-rich sequence DNA-binding factor 2) (Transcription factor 9) (TCF-9)		 Homo sapiens
TI:9606 None
 
PAXB1_MOUSE
Ensembl»
4.0
Paxbp1 PAX3- and PAX7-binding protein 1
(PAX3/7BP) (GC-rich sequence DNA-binding factor 1)		 Mus musculus
TI:10090 None
 
GCFC2_MOUSE
Ensembl»
0.5
Gcfc2 Intron Large complex component GCFC2 (GC-rich sequence DNA-binding factor)
(GC-rich sequence DNA-binding factor 2) (Transcription factor 9) (TCF-9)		 Mus musculus
TI:10090 None
 
ILP1_ARATH
TAIR»
3.2
ILP1 Transcriptional repressor ILP1 (INCREASED
LEVEL OF POLYPLOIDY 1)		 Arabidopsis thaliana
TI:3702 None
 
Q9VI54_DROME
FlyBase»
1.0
Dmel\CG1965 LD29489p (Uncharacterized protein, isoform A) Drosophila melanogaster
TI:7227 None
 
E9QDJ4_DANRE
ZFIN»
0.5
zgc:158234 PAX3 and PAX7-binding protein 1
(PAX3- and PAX7-binding protein 1)		 Danio rerio
TI:7955 None
 
F4KCH7_ARATH
TAIR»
0.0
At5g09210 GC-rich sequence DNA-binding factor-like protein Arabidopsis thaliana
TI:3702 None
 
G5ECH1_CAEEL
WormBase»
0.0
mog-7 GCF C-terminal domain-containing protein Caenorhabditis elegans
TI:6239 None
 
Q54JF1_DICDI
dictyBase»
0.0
DDB_G0288089 GC-rich sequence DNA-binding factor-like protein Dictyostelium discoideum
TI:44689 None
 
A0A8I6AVA2_RAT
RGD»
1.0
Gcfc2 GC-rich sequence DNA-binding factor 2 Rattus norvegicus
TI:10116 None
   
A0A8M2B5P2_DANRE
CTD»
0.0
gcfc2 GC-rich sequence DNA-binding factor 2 isoform X1 Danio rerio
TI:7955 None
   
A0A8V0X1H8_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0X9V7_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XSS0_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XSV3_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XSV8_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XTI2_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XTN3_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XTQ2_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XUF3_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XUJ3_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XUT2_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XX46_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XXZ9_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XYA7_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XYH9_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XYQ4_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XZ70_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XZ90_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XZ92_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XZB1_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XZC8_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XZG3_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0XZU9_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y036_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y0B1_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y0Q4_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y0W1_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y231_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y249_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y2T6_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y2U6_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y2Y5_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y399_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y3C2_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y3D2_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y3P0_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y3P4_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y5E7_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y5P8_CHICK
Ensembl»
0.0
PAXBP1 PAX3 and PAX7 binding protein 1 Gallus gallus
TI:9031 None
   
A0A8V0Y5T9_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y6I6_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y6P7_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y7K1_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
A0A8V0Y7Q6_CHICK
Ensembl»
0.0
GCF C-terminal domain-containing protein Gallus gallus
TI:9031 None
   
D4A8C8_RAT
RGD»
3.0
Paxbp1 PAX3 and PAX7 binding protein 1 Rattus norvegicus
TI:10116 None