Collated Gene Ontology terms

Biological process: RNA binding(2014, 2015) peptidyl-prolyl cis-trans isomerase activity(2024) isomerase activity(2024)

Molecular function: mRNA processing2024 RNA splicing2024 mRNA splicing, via spliceosome2010, 2011, 2018, 2024 mitotic G2 DNA damage checkpoint signaling2013, 2024 in utero embryonic development2012, 2024 gastrulation2012, 2024 embryonic organ development2012, 2024 positive regulation of cell population proliferation2015, 2024 protein peptidyl-prolyl isomerization2024 mRNA cis splicing, via spliceosome2005

Cellular component: nucleus2001, 2003, 2018, 2024 catalytic step 2 spliceosome2010, 2011, 2017, 2024 spliceosomal complex2014, 2024 post-mRNA release spliceosomal complex2016, 2017, 2024 Prp19 complex2013, 2017, 2024 U2-type catalytic step 2 spliceosome2018, 2024 nuclear speck2023, 2024 membrane2024 precatalytic spliceosome2010 nucleoplasm2016
U2-type prespliceosome2015

Phylogenetic distribution

Chordates: 22/21 
Echinoderms: 0/0 
Hemichordates: 1/1 
Annelids: 1/1 
Molluscs: 0/0 
Bryozoans: 0/0 
Platyhelminthes: 0/0 
Rotifers: 0/0 
Nematodes: 3/3 
Arthropods: 4/5 
Tardigrades: 0/0 
Placozoa: 0/1 
Cnidaria: 1/1 
Porifera: 0/0 
Choanoflagellates+: 10/1 
Dikarya: 0/14 
Fungi (other): 0/1 
Protozoa: 3/3 
Excavates: 1/4 
Harosa: 2/4 
Hacrobia: 0/0 
Plants: 36/39 
Archea: 0/8 
Bacteria: 0/35 

Find a cluster

Protein ID:
UniProt ID, accession, gene name or model org. database name
Cluster ID:
e.g. "UKP00123" or "123"

Download

Protein sequences (FASTA format)

Knownness history

2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 0 2 4 6 8 10 Knownness

Click here to switch to the previous version of the database.

Proteins

UniProt ID
Organism DB»		 Standard knownness clustom knownness Gene name Description Species  [Key only] GO terms Seq. links Protein domain links
W1P1U9_AMBTC
EnsemblPlants»
0.0
AMTR_s00002p00017020 Pre-mRNA-splicing factor SYF2 Amborella trichopoda
TI:13333 None
 
H9GK39_ANOCA
Ensembl»
0.0
Pre-mRNA-splicing factor SYF2 Anolis carolinensis
TI:28377 None
   
H9GQZ2_ANOCA
Ensembl»
0.0
Pre-mRNA-splicing factor SYF2 Anolis carolinensis
TI:28377 None
   
A0A1S4H495_ANOGA
EnsemblMetazoa»
0.0
Pre-mRNA-splicing factor SYF2 Anopheles gambiae
TI:7165 None
 
Q9ZVX7_ARATH
TAIR»
0.0
ATSYF2 Pre-mRNA-splicing factor SYF2 Arabidopsis thaliana
TI:3702 None
 
SYF2_ASPFU
EnsemblFungi»
0.0
syf2 Pre-mRNA-splicing factor syf2 Aspergillus fumigatus
TI:746128 None
 
F4NW03_BATDJ
EnsemblBacteria»
0.0
BATDEDRAFT_36608 Pre-mRNA-splicing factor SYF2 Batrachochytrium dendrobatidis
TI:109871 None
 
A0A3Q1MFC2_BOVIN
Ensembl»
0.0
SYF2 Pre-mRNA-splicing factor SYF2 Bos taurus
TI:9913 None
   
I1GM62_BRADI
EnsemblPlants»
0.0
100840457 Pre-mRNA-splicing factor SYF2 Brachypodium distachyon
TI:15368 None
 
I1GWY1_BRADI
EnsemblPlants»
0.0
100831110 WRC domain-containing protein Brachypodium distachyon
TI:15368 None
 
I1GWY3_BRADI
EnsemblPlants»
0.0
100831412 Pre-mRNA-splicing factor SYF2 Brachypodium distachyon
TI:15368 None
 
A0A9J7LQI4_BRAFL
CTD»
0.0
LOC118423250 Pre-mRNA-splicing factor SYF2 Branchiostoma floridae
TI:7739 None
   
A0A078GY15_BRANA
EnsemblPlants»
0.0
BnaA07g03400D Pre-mRNA-splicing factor SYF2 Brassica napus
TI:3708 None
 
M4CCR8_BRACM
EnsemblPlants»
0.0
Pre-mRNA-splicing factor SYF2 Brassica campestris
TI:3711 None
   
SYF2_CAEBR
WormBase»
0.0
syf-2 Pre-mRNA-splicing factor syf-2 Caenorhabditis briggsae
TI:6238 None
 
SYF2_CAEEL
WormBase»
0.0
syf-2 Pre-mRNA-splicing factor syf-2 Caenorhabditis elegans
TI:6239 None
 
A0A8I3NP67_CANLF
Ensembl»
0.0
Pre-mRNA-splicing factor SYF2 Canis lupus
TI:9612 None
   
A0A8I3P1I2_CANLF
Ensembl»
0.0
LOC478184 Pre-mRNA-splicing factor SYF2 Canis lupus
TI:9612 None
   
A0A2G2YK68_CAPAN
EnsemblPlants»
0.0
T459_25244 Pre-mRNA-splicing factor SYF2 Capsicum annuum
TI:4072 None
 
F6QBK7_CIOIN
Ensembl»
0.0
Pre-mRNA-splicing factor SYF2 Ciona intestinalis
TI:7719 None
   
A0A067FHL7_CITSI
Ensembl»
0.0
CISIN_1g045904mg Pre-mRNA-splicing factor SYF2 Citrus sinensis
TI:2711 None
 
A0A067FL15_CITSI
Ensembl»
0.0
CISIN_1g021740mg Pre-mRNA-splicing factor SYF2 Citrus sinensis
TI:2711 None
 
Q5KCA1_CRYNJ
EnsemblFungi»
0.0
CNH00300 Pre-mRNA-splicing factor SYF2 Cryptococcus neoformans
TI:5207 None
 
A0A0A0LJ81_CUCSA
EnsemblPlants»
0.0
Csa_2G270830 Pre-mRNA-splicing factor SYF2 Cucumis sativus
TI:3659 None
 
SYF2_DANRE
ZFIN»
0.5
syf2 Pre-mRNA-splicing factor syf2 Danio rerio
TI:7955 None
 
E9H1R4_DAPPU
EnsemblMetazoa»
0.0
DAPPUDRAFT_109004 Pre-mRNA-splicing factor SYF2 Daphnia pulex
TI:6669 None
 
F0Z8H7_DICPU
EnsemblProtists»
0.0
DICPUDRAFT_147443 Pre-mRNA-splicing factor SYF2 Dictyostelium purpureum
TI:5786 None
 
Q54PG4_DICDI
dictyBase»
0.0
syf2 Pre-mRNA-splicing factor SYF2 Dictyostelium discoideum
TI:44689 None
 
SYF2_DROME
FlyBase»
2.0
Syf2 Pre-mRNA-splicing factor Syf2 Drosophila melanogaster
TI:7227 None
 
SYF2_EMENI
EnsemblFungi»
0.0
syf2 Pre-mRNA-splicing factor syf2 Emericella nidulans
TI:162425 None
 
C4M3E5_ENTH1
EnsemblProtists»
0.0
EHI_095880 Pre-mRNA-splicing factor SYF2 Entamoeba histolytica
TI:5759 None
 
C4MBR2_ENTH1
EnsemblProtists»
0.0
EHI_060110 Pre-mRNA-splicing factor SYF2 Entamoeba histolytica
TI:5759 None
 
F6Q557_HORSE
Ensembl»
0.0
LOC100071364 Pre-mRNA-splicing factor SYF2 Equus caballus
TI:9796 None
   
F6TEU9_HORSE
Ensembl»
0.0
LOC100071373 Pre-mRNA-splicing factor SYF2 Equus caballus
TI:9796 None
   
A0A022RJW4_ERYGU
EnsemblFungi»
0.0
MIMGU_mgv1a010566mg Pre-mRNA-splicing factor SYF2 Erythranthe guttata
TI:4155 None
 
A0A2I2U979_FELCA
Ensembl»
0.0
Pre-mRNA-splicing factor SYF2 Felis catus
TI:9685 None
 
A0A337S7E4_FELCA
Ensembl»
0.0
Pre-mRNA-splicing factor SYF2 Felis catus
TI:9685 None
 
A0A8V0YV61_CHICK
Ensembl»
0.0
SYF2 Pre-mRNA-splicing factor SYF2 Gallus gallus
TI:9031 None
   
I1LF43_SOYBN
EnsemblPlants»
0.0
100787714 Pre-mRNA-splicing factor SYF2 Glycine max
TI:3847 None
 
I1NF98_SOYBN
EnsemblPlants»
0.0
100811651 Pre-mRNA-splicing factor SYF2 Glycine max
TI:3847 None
 
A0A2I2YYX6_GORGO
Ensembl»
0.0
SYF2 Pre-mRNA-splicing factor SYF2 Gorilla gorilla
TI:9593 None
 
A0A1U8IN43_GOSHI
Ensembl»
0.0
LOC107898558 Pre-mRNA-splicing factor SYF2 Gossypium hirsutum
TI:3635 None
   
A0A1U8KYT1_GOSHI
Ensembl»
0.0
LOC107920904 Pre-mRNA-splicing factor SYF2 Gossypium hirsutum
TI:3635 None
   
A0A1U8NHG2_GOSHI
Ensembl»
0.0
LOC107947183 Pre-mRNA-splicing factor SYF2 Gossypium hirsutum
TI:3635 None
   
A0A1U8NMZ4_GOSHI
Ensembl»
0.0
LOC107949108 Pre-mRNA-splicing factor SYF2 Gossypium hirsutum
TI:3635 None
   
A0A251TKG4_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr10g0300841 HanXRQr2_Chr10g0438901 Pre-mRNA-splicing factor SYF2 Helianthus annuus
TI:4232 None
 
A0A251TM11_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr10g0300831 HanXRQr2_Chr10g0438881 Putative mRNA splicing factor
SYF2 (mRNA splicing factor SYF2)		 Helianthus annuus
TI:4232 None
 
A0A251UKY4_HELAN
EnsemblPlants»
0.0
HannXRQ_Chr05g0128751 HanXRQr2_Chr17g0788011 Pre-mRNA-splicing factor SYF2 Helianthus annuus
TI:4232 None
 
A0A9K3JYX4_HELAN
EnsemblPlants»
0.0
HanXRQr2_Chr00c004g0832561 Pre-mRNA-splicing factor SYF2 Helianthus annuus
TI:4232 None
 
A0A9K3K0K4_HELAN
EnsemblPlants»
0.0
HanXRQr2_Chr00c004g0832551 mRNA splicing factor SYF2 Helianthus annuus
TI:4232 None
 
T1FCZ7_HELRO
EnsemblMetazoa»
0.0
20206696 Pre-mRNA-splicing factor SYF2 Helobdella robusta
TI:6412 None
 
T1FM63_HELRO
EnsemblMetazoa»
0.0
20209912 Pre-mRNA-splicing factor SYF2 Helobdella robusta
TI:6412 None
 
T1G208_HELRO
EnsemblMetazoa»
0.0
20215106 Pre-mRNA-splicing factor SYF2 Helobdella robusta
TI:6412 None
 
SYF2_HUMAN
Ensembl»
2.3
SYF2 Pre-mRNA-splicing factor
SYF2 (CCNDBP1-interactor) (p29)		 Homo sapiens
TI:9606 None
 
A0A8I6YQN8_HORVV
EnsemblPlants»
0.0
Uncharacterized protein Hordeum vulgare
TI:4513 None
   
A0A8I6Z742_HORVV
EnsemblPlants»
0.0
Pre-mRNA-splicing factor SYF2 Hordeum vulgare
TI:4513 None
   
A0A2I4EWT2_JUGRE
EnsemblPlants»
0.0
LOC108993404 Pre-mRNA-splicing factor SYF2 Juglans regia
TI:51240 None
 
A0A1Y1HJY0_KLENI
EnsemblPlants»
0.0
KFL_000050190 Pre-mRNA-splicing factor SYF2 Klebsormidium nitens
TI:105231 None
 
W5M4A3_LEPOC
Ensembl»
0.0
Pre-mRNA-splicing factor SYF2 Lepisosteus oculatus
TI:7918 None
 
F7GXY6_MACMU
Ensembl»
0.0
SYF2 Pre-mRNA-splicing factor SYF2 Macaca mulatta
TI:9544 None
   
A0A2C9UZX0_MANES
EnsemblPlants»
0.0
MANES_11G096700 Pre-mRNA-splicing factor SYF2 Manihot esculenta
TI:3983 None
 
A0A2R6XJL8_MARPO
EnsemblPlants»
0.0
MARPO_0011s0013 Pre-mRNA-splicing factor SYF2 Marchantia polymorpha
TI:3197 None
 
A0A072VRJ1_MEDTR
EnsemblPlants»
0.0
25485617 Pre-mRNA-splicing factor SYF2 Medicago truncatula
TI:3880 None
 
F7C3I7_MONDO
Ensembl»
0.0
Pre-mRNA-splicing factor SYF2 Monodelphis domestica
TI:13616 None
   
SYF2_MOUSE
Ensembl»
3.7
Syf2 Pre-mRNA-splicing factor SYF2
(CCNDBP1-interactor) (mp29) (p29)		 Mus musculus
TI:10090 None
 
A0A804HRX5_MUSAM
EnsemblPlants»
0.0
103984853 Pre-mRNA-splicing factor SYF2 Musa acuminata
TI:4641 None
   
A0A804HZY0_MUSAM
EnsemblPlants»
0.0
GSMUA_61750.1 (wild Malaysian banana) hypothetical protein Musa acuminata
TI:4641 None
 
A0A804I6W3_MUSAM
EnsemblPlants»
0.0
103977290 Pre-mRNA-splicing factor SYF2 Musa acuminata
TI:4641 None
   
A0A804L5D6_MUSAM
EnsemblPlants»
0.0
GSMUA_17760.1 (wild Malaysian banana) hypothetical protein Musa acuminata
TI:4641 None
 
A0A1U8ATZ7_NELNU
EnsemblBacteria»
0.0
LOC104603905 Pre-mRNA-splicing factor SYF2 Nelumbo nucifera
TI:4432 None
 
A0A1U8QA60_NELNU
EnsemblBacteria»
0.0
LOC104611540 Pre-mRNA-splicing factor SYF2 Nelumbo nucifera
TI:4432 None
   
A7SD68_NEMVE
EnsemblMetazoa»
0.0
NEMVEDRAFT_v1g169197 Pre-mRNA-splicing factor SYF2 Nematostella vectensis
TI:45351 None
 
SYF2_NEUCR
EnsemblFungi»
0.0
msp-4 Pre-mRNA-splicing factor syf2
(mRNA-splicing protein 4)		 Neurospora crassa
TI:5141 None
 
A0A1S3ZH43_TOBAC
EnsemblFungi»
0.0
LOC107786751 Pre-mRNA-splicing factor SYF2 Nicotiana tabacum
TI:4097 None
   
A0A1S4C5N3_TOBAC
EnsemblFungi»
0.0
LOC107815181 Pre-mRNA-splicing factor SYF2 Nicotiana tabacum
TI:4097 None
   
A0A6I8N0K9_ORNAN
Ensembl»
0.0
SYF2 Pre-mRNA-splicing factor SYF2 Ornithorhynchus anatinus
TI:9258 None
   
Q5Z7Y7_ORYSJ
EnsemblPlants»
0.0
Os06g0711600 Pre-mRNA-splicing factor SYF2 Oryza sativa
TI:4530 None
 
Q5Z7Y9_ORYSJ
EnsemblPlants»
0.0
Os06g0711200 Os06g0711200 protein (cDNA
clone:002-150-F09, full insert sequence)		 Oryza sativa
TI:4530 None
 
Q5Z9F9_ORYSJ
EnsemblPlants»
0.0
Os06g0711100 Os06g0711100 protein (cDNA
clone:J023085C01, full insert sequence)		 Oryza sativa
TI:4530 None
 
A0A3B3H5R1_ORYLA
Ensembl»
0.0
syf2 Pre-mRNA-splicing factor SYF2 Oryzias latipes
TI:8090 None
   
G2HJ79_PANTR
Ensembl»
0.0
SYF2 Pre-mRNA-splicing factor SYF2 Pan troglodytes
TI:9598 None
 
A0A2K1J0C1_PHYPA
EnsemblPlants»
0.0
PHYPA_022869 Pre-mRNA-splicing factor SYF2 Physcomitrium patens
TI:3218 None
 
H3GBR8_PHYRM
EnsemblProtists»
0.0
Pre-mRNA-splicing factor SYF2 Phytophthora ramorum
TI:164328 None
 
Q8IAN0_PLAF7
EnsemblProtists»
0.0
PF3D7_0803000 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) Plasmodium falciparum
TI:5833 None
 
B9H1J4_POPTR
EnsemblPlants»
0.0
POPTR_004G176200 Pre-mRNA-splicing factor SYF2 Populus trichocarpa
TI:3694 None
 
A0A454XM36_PRIPA
EnsemblMetazoa»
0.0
WBGene00111268 Pre-mRNA-splicing factor SYF2 Pristionchus pacificus
TI:54126 None
 
M5VKL0_PRUPE
EnsemblPlants»
0.0
PRUPE_8G166600 Pre-mRNA-splicing factor SYF2 Prunus persica
TI:3760 None
 
E3K8V6_PUCGT
EnsemblFungi»
0.0
PGTG_06501 Pre-mRNA-splicing factor SYF2 Puccinia graminis
TI:5297 None
 
SYF2_RAT
RGD»
3.8
Syf2 Pre-mRNA-splicing factor SYF2 Rattus norvegicus
TI:10116 None
 
B9S5M2_RICCO
EnsemblBacteria»
0.0
RCOM_0979410 Pre-mRNA-splicing factor SYF2 Ricinus communis
TI:3988 None
 
B6K1B9_SCHJY
EnsemblFungi»
0.0
SJAG_02844 Pre-mRNA-splicing factor SYF2 Schizosaccharomyces japonicus
TI:4897 None
 
SYF2_SCHPO
PomBase»
1.3
syf2 Pre-mRNA-splicing factor syf2 Schizosaccharomyces pombe
TI:4896 None
 
A7EWF2_SCLS1
EnsemblFungi»
0.0
SS1G_09661 Pre-mRNA-splicing factor SYF2 Sclerotinia sclerotiorum
TI:5180 None
 
D8RT51_SELML
EnsemblPlants»
0.0
SELMODRAFT_442403 Pre-mRNA-splicing factor SYF2 Selaginella moellendorffii
TI:88036 None
 
D8SQJ5_SELML
EnsemblPlants»
0.0
SELMODRAFT_424632 Pre-mRNA-splicing factor SYF2 Selaginella moellendorffii
TI:88036 None
 
K3XWD4_SETIT
EnsemblPlants»
0.0
Uncharacterized protein Setaria italica
TI:4555 None
 
K3XXY7_SETIT
EnsemblPlants»
0.0
101774327 Pre-mRNA-splicing factor SYF2 Setaria italica
TI:4555 None
 
A0A3Q7HBH3_SOLLC
EnsemblPlants»
0.0
101250425 Pre-mRNA-splicing factor SYF2 Solanum lycopersicum
TI:4081 None
   
A0A3Q7HRG7_SOLLC
EnsemblPlants»
0.0
Pre-mRNA-splicing factor SYF2 Solanum lycopersicum
TI:4081 None
   
A0A3Q7IIR9_SOLLC
EnsemblPlants»
0.0
101245103 Pre-mRNA-splicing factor SYF2 Solanum lycopersicum
TI:4081 None
   
M1APP9_SOLTU
EnsemblPlants»
0.0
102589746 Pre-mRNA-splicing factor SYF2 Solanum tuberosum
TI:4113 None
   
M1APQ0_SOLTU
EnsemblPlants»
0.0
102590074 Pre-mRNA-splicing factor SYF2 Solanum tuberosum
TI:4113 None
   
M1CJD6_SOLTU
EnsemblPlants»
0.0
102590368 Pre-mRNA-splicing factor SYF2 Solanum tuberosum
TI:4113 None
   
M1CTR0_SOLTU
EnsemblPlants»
0.0
Pre-mRNA-splicing factor SYF2 Solanum tuberosum
TI:4113 None
   
C5Z9E4_SORBI
EnsemblPlants»
0.0
SORBI_3010G260300 Uncharacterized protein Sorghum bicolor
TI:4558 None
 
C5Z9E6_SORBI
EnsemblPlants»
0.0
SORBI_3010G260500 Pre-mRNA-splicing factor SYF2 Sorghum bicolor
TI:4558 None
 
A0A7M7RE90_STRPU
EnsemblMetazoa»
0.0
Pre-mRNA-splicing factor SYF2 Strongylocentrotus purpuratus
TI:7668 None
   
A0A287AZF3_PIG
Ensembl»
0.0
SYF2 Pre-mRNA-splicing factor SYF2 Sus scrofa
TI:9823 None
   
A0A061DZ07_THECC
EnsemblPlants»
0.0
TCM_006604 Pre-mRNA-splicing factor SYF2 Theobroma cacao
TI:3641 None
 
D6WVD0_TRICA
EnsemblMetazoa»
0.0
AUGUSTUS-3.0.2_06199 Pre-mRNA-splicing factor SYF2 Tribolium castaneum
TI:7070 None
 
A2FGQ9_TRIV3
VEuPathDB»
0.0
TVAG_304250 Pre-mRNA-splicing factor SYF2 Trichomonas vaginalis
TI:5722 None
 
A0A3B6RJR2_WHEAT
EnsemblPlants»
0.0
CFC21_099149 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A3B6RNK4_WHEAT
EnsemblPlants»
0.0
CFC21_099147 Pre-mRNA-splicing factor SYF2 Triticum aestivum
TI:4565 None
 
A0A3B6SKK9_WHEAT
EnsemblPlants»
0.0
CFC21_104208 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A3B6SQI7_WHEAT
EnsemblPlants»
0.0
Pre-mRNA-splicing factor SYF2 Triticum aestivum
TI:4565 None
   
A0A3B6TVB1_WHEAT
EnsemblPlants»
0.0
CFC21_110481 Uncharacterized protein Triticum aestivum
TI:4565 None
 
A0A3B6TVV9_WHEAT
EnsemblPlants»
0.0
CFC21_109102 Pre-mRNA-splicing factor SYF2 Triticum aestivum
TI:4565 None
 
F6I0Z7_VITVI
EnsemblPlants»
0.0
VIT_03s0038g02530 Pre-mRNA-splicing factor SYF2 Vitis vinifera
TI:29760 None
 
A0A8J0VKW9_XENLA
Xenbase»
0.0
syf2.S Pre-mRNA-splicing factor SYF2 Xenopus laevis
TI:8355 None
   
A0A8J1L006_XENLA
Xenbase»
0.0
LOC108718857 Pre-mRNA-splicing factor SYF2 Xenopus laevis
TI:8355 None
   
SYF2_XENLA
Xenbase»
0.0
syf2 Pre-mRNA-splicing factor syf2 Xenopus laevis
TI:8355 None
 
SYF2_XENTR
Xenbase»
0.0
syf2 Pre-mRNA-splicing factor syf2 Xenopus tropicalis
TI:8364 None
 
SYF2_YARLI
EnsemblFungi»
0.0
SYF2 Pre-mRNA-splicing factor SYF2 Yarrowia lipolytica
TI:4952 None
 
A0A804UAJ2_MAIZE
EnsemblPlants»
0.0
Pre-mRNA-splicing factor SYF2 Zea mays
TI:4577 None
   
B4FA50_MAIZE
EnsemblPlants»
0.0
100274600 Pre-mRNA-splicing factor SYF2 Zea mays
TI:4577 None
 
C4J5W7_MAIZE
EnsemblPlants»
0.0
100275696 Uncharacterized protein Zea mays
TI:4577 None
 
A0A0K9P2B0_ZOSMR
EnsemblPlants»
0.0
ZOSMA_46G00340 Pre-mRNA-splicing factor SYF2 Zostera marina
TI:29655 None